RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
SMC4-210ENST00000469762 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
SMC4-210ENST00000469762 NOB1Q9ULX3 412 aaKnown RBP13.04□□□□□ -0.32
SMC4-210ENST00000469762 CT47B1P0C2W7 299 aaPredicted RBP13.04□□□□□ -0.32
SMC4-210ENST00000469762 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
SMC4-210ENST00000469762 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
SMC4-210ENST00000469762 ABCC3O15438 1527 aa13.04□□□□□ -0.32
SMC4-210ENST00000469762 ASXL2Q76L83 1435 aa13.03□□□□□ -0.32
SMC4-210ENST00000469762 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
SMC4-210ENST00000469762 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
SMC4-210ENST00000469762 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
SMC4-210ENST00000469762 GZF1Q9H116 711 aaPredicted RBP13.03□□□□□ -0.32
SMC4-210ENST00000469762 KIF2CQ99661 725 aa13.02□□□□□ -0.32
SMC4-210ENST00000469762 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.33
SMC4-210ENST00000469762 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
SMC4-210ENST00000469762 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
SMC4-210ENST00000469762 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
SMC4-210ENST00000469762 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
SMC4-210ENST00000469762 ARXQ96QS3 562 aa13.01□□□□□ -0.33
SMC4-210ENST00000469762 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
SMC4-210ENST00000469762 TRAK2O60296 914 aa13.01□□□□□ -0.33
SMC4-210ENST00000469762 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
SMC4-210ENST00000469762 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
SMC4-210ENST00000469762 MYO5BQ9ULV0 1848 aa13□□□□□ -0.33
SMC4-210ENST00000469762 NUCB1Q02818 461 aa13□□□□□ -0.33
SMC4-210ENST00000469762 FYB1O15117 783 aa13□□□□□ -0.33
SMC4-210ENST00000469762 MED14O60244 1454 aa13□□□□□ -0.33
SMC4-210ENST00000469762 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 GOLGA6L3A6NEY3 463 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 GGT6Q6P531 493 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 PTPRMP28827 1452 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 IL16Q14005 1332 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 CD2BP2O95400 341 aaKnown RBP12.99□□□□□ -0.33
SMC4-210ENST00000469762 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMC4-210ENST00000469762 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
SMC4-210ENST00000469762 CLTCQ00610 1675 aaKnown RBP12.99□□□□□ -0.33
SMC4-210ENST00000469762 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
SMC4-210ENST00000469762 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
SMC4-210ENST00000469762 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
SMC4-210ENST00000469762 CDC42BPGQ6DT37 1551 aa12.97□□□□□ -0.33
SMC4-210ENST00000469762 SNX21Q969T3 373 aa12.97□□□□□ -0.33
SMC4-210ENST00000469762 RIPK4P57078 832 aa12.97□□□□□ -0.33
SMC4-210ENST00000469762 LNPKQ9C0E8 428 aa12.97□□□□□ -0.33
SMC4-210ENST00000469762 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.33
SMC4-210ENST00000469762 ERBB4Q15303 1308 aa12.96□□□□□ -0.34
SMC4-210ENST00000469762 SIRT2Q8IXJ6 389 aa12.96□□□□□ -0.34
SMC4-210ENST00000469762 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
SMC4-210ENST00000469762 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
SMC4-210ENST00000469762 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
SMC4-210ENST00000469762 FBLN1P23142 703 aa12.95□□□□□ -0.34
SMC4-210ENST00000469762 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
SMC4-210ENST00000469762 CLCN1P35523 988 aa12.94□□□□□ -0.34
SMC4-210ENST00000469762 KNDC1Q76NI1 1749 aa12.94□□□□□ -0.34
SMC4-210ENST00000469762 SENP3Q9H4L4 574 aaPredicted RBP12.94□□□□□ -0.34
SMC4-210ENST00000469762 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
SMC4-210ENST00000469762 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
SMC4-210ENST00000469762 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
SMC4-210ENST00000469762 IDI1Q13907 227 aa12.94□□□□□ -0.34
SMC4-210ENST00000469762 ZFYVE9O95405 1425 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 HSCBQ8IWL3 235 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 MRE11P49959 708 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 RAB3GAP1Q15042 981 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 BMP2KLQ5H9B9 411 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
SMC4-210ENST00000469762 STK26Q9P289 416 aa12.93□□□□□ -0.34
SMC4-210ENST00000469762 TMEM131LA2VDJ0 1609 aa12.92□□□□□ -0.34
SMC4-210ENST00000469762 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
SMC4-210ENST00000469762 PHACTR3Q96KR7 559 aa12.92□□□□□ -0.34
SMC4-210ENST00000469762 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
SMC4-210ENST00000469762 PTCH1Q13635 1447 aa12.91□□□□□ -0.34
SMC4-210ENST00000469762 VAMP4O75379 141 aa12.91□□□□□ -0.34
SMC4-210ENST00000469762 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
SMC4-210ENST00000469762 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
SMC4-210ENST00000469762 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
SMC4-210ENST00000469762 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
SMC4-210ENST00000469762 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
SMC4-210ENST00000469762 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
SMC4-210ENST00000469762 MAP2P11137 1827 aaKnown RBP12.91□□□□□ -0.34
SMC4-210ENST00000469762 MINK1Q8N4C8 1332 aaPredicted RBP12.9□□□□□ -0.34
SMC4-210ENST00000469762 AK9Q5TCS8 1911 aa12.9□□□□□ -0.34
SMC4-210ENST00000469762 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.34
SMC4-210ENST00000469762 TBC1D9Q6ZT07 1266 aa12.9□□□□□ -0.34
SMC4-210ENST00000469762 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
SMC4-210ENST00000469762 ARHGAP31Q2M1Z3 1444 aa12.9□□□□□ -0.34
SMC4-210ENST00000469762 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
SMC4-210ENST00000469762 IPO8O15397 1037 aaKnown RBP12.89□□□□□ -0.35
SMC4-210ENST00000469762 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
SMC4-210ENST00000469762 ATAD2Q6PL18 1390 aa12.89□□□□□ -0.35
SMC4-210ENST00000469762 YTHDC2Q9H6S0 1430 aaKnown RBP12.89□□□□□ -0.35
SMC4-210ENST00000469762 FCHSD2O94868 740 aa12.88□□□□□ -0.35
SMC4-210ENST00000469762 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
SMC4-210ENST00000469762 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
SMC4-210ENST00000469762 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms