RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 TMC1Q8TDI8 760 aa21.41■■□□□ 1.02
C19orf54-202ENST00000469741 PNISRQ8TF01 805 aaKnown RBP21.41■■□□□ 1.02
C19orf54-202ENST00000469741 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
C19orf54-202ENST00000469741 ACEP12821 1306 aa21.41■■□□□ 1.02
C19orf54-202ENST00000469741 NEFLP07196 543 aa21.41■■□□□ 1.02
C19orf54-202ENST00000469741 PSME1Q06323 249 aa21.41■■□□□ 1.02
C19orf54-202ENST00000469741 PANK3Q9H999 370 aa21.41■■□□□ 1.02
C19orf54-202ENST00000469741 KIF1AQ12756 1690 aa21.4■■□□□ 1.02
C19orf54-202ENST00000469741 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
C19orf54-202ENST00000469741 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
C19orf54-202ENST00000469741 CABLES1Q8TDN4 633 aa21.4■■□□□ 1.02
C19orf54-202ENST00000469741 RGS17Q9UGC6 210 aaPredicted RBP21.39■■□□□ 1.01
C19orf54-202ENST00000469741 SHPRHQ149N8 1683 aa21.39■■□□□ 1.01
C19orf54-202ENST00000469741 PPIP5K1Q6PFW1 1433 aa21.39■■□□□ 1.01
C19orf54-202ENST00000469741 CNGB1Q14028 1251 aaPredicted RBP21.38■■□□□ 1.01
C19orf54-202ENST00000469741 SPATA31A3Q5VYP0 1347 aa21.38■■□□□ 1.01
C19orf54-202ENST00000469741 PLEKHG3A1L390 1219 aa21.37■■□□□ 1.01
C19orf54-202ENST00000469741 FKBP8Q14318 412 aa21.37■■□□□ 1.01
C19orf54-202ENST00000469741 NLRP13Q86W25 1043 aa21.37■■□□□ 1.01
C19orf54-202ENST00000469741 TRPM3Q9HCF6 1732 aaPredicted RBP21.37■■□□□ 1.01
C19orf54-202ENST00000469741 NUTM2GQ5VZR2 741 aa21.36■■□□□ 1.01
C19orf54-202ENST00000469741 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
C19orf54-202ENST00000469741 SBNO2Q9Y2G9 1366 aa21.36■■□□□ 1.01
C19orf54-202ENST00000469741 SLC12A5Q9H2X9 1139 aa21.36■■□□□ 1.01
C19orf54-202ENST00000469741 ITSN1Q15811 1721 aa21.35■■□□□ 1.01
C19orf54-202ENST00000469741 ADAMTS2O95450 1211 aa21.34■■□□□ 1.01
C19orf54-202ENST00000469741 POLR3AO14802 1390 aaPredicted RBP21.34■■□□□ 1.01
C19orf54-202ENST00000469741 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
C19orf54-202ENST00000469741 MYOM1P52179 1685 aa21.31■■□□□ 1
C19orf54-202ENST00000469741 TNS3Q68CZ2 1445 aa21.31■■□□□ 1
C19orf54-202ENST00000469741 ILDR2Q71H61 639 aa21.31■■□□□ 1
C19orf54-202ENST00000469741 CD163L1Q9NR16 1453 aa21.3■■□□□ 1
C19orf54-202ENST00000469741 ALS2Q96Q42 1657 aa21.3■■□□□ 1
C19orf54-202ENST00000469741 SPATA31A6Q5VVP1 1343 aa21.3■■□□□ 1
C19orf54-202ENST00000469741 INSRP06213 1382 aa21.29■■□□□ 1
C19orf54-202ENST00000469741 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
C19orf54-202ENST00000469741 SBNO1A3KN83 1393 aa21.28■■□□□ 1
C19orf54-202ENST00000469741 NPC1L1Q9UHC9 1359 aa21.28■■□□□ 1
C19orf54-202ENST00000469741 KNSTRNQ9Y448 316 aa21.28■■□□□ 1
C19orf54-202ENST00000469741 MYT1Q01538 1121 aa21.27■■□□□ 1
C19orf54-202ENST00000469741 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
C19orf54-202ENST00000469741 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
C19orf54-202ENST00000469741 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
C19orf54-202ENST00000469741 C8orf37Q96NL8 207 aa21.25■□□□□ 0.99
C19orf54-202ENST00000469741 SMG6Q86US8 1419 aaKnown RBP21.25■□□□□ 0.99
C19orf54-202ENST00000469741 USP6P35125 1406 aa21.25■□□□□ 0.99
C19orf54-202ENST00000469741 CPSF1Q10570 1443 aaKnown RBP21.25■□□□□ 0.99
C19orf54-202ENST00000469741 SSH2Q76I76 1423 aa21.25■□□□□ 0.99
C19orf54-202ENST00000469741 AKAP12Q02952 1782 aa21.24■□□□□ 0.99
C19orf54-202ENST00000469741 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
C19orf54-202ENST00000469741 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
C19orf54-202ENST00000469741 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
C19orf54-202ENST00000469741 ABCA3Q99758 1704 aa21.23■□□□□ 0.99
C19orf54-202ENST00000469741 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
C19orf54-202ENST00000469741 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
C19orf54-202ENST00000469741 ABTB2Q8N961 1025 aa21.22■□□□□ 0.99
C19orf54-202ENST00000469741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.99
C19orf54-202ENST00000469741 A0A1W2PP64 1363 aa21.21■□□□□ 0.99
C19orf54-202ENST00000469741 CRYBG1Q9Y4K1 1723 aa21.21■□□□□ 0.99
C19orf54-202ENST00000469741 AFF2P51816 1311 aa21.2■□□□□ 0.98
C19orf54-202ENST00000469741 TTC21BQ7Z4L5 1316 aa21.2■□□□□ 0.98
C19orf54-202ENST00000469741 FAM83GA6ND36 823 aa21.18■□□□□ 0.98
C19orf54-202ENST00000469741 PUS7Q96PZ0 661 aaKnown RBP21.18■□□□□ 0.98
C19orf54-202ENST00000469741 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
C19orf54-202ENST00000469741 NME9Q86XW9 330 aa21.18■□□□□ 0.98
C19orf54-202ENST00000469741 NGLY1Q96IV0 654 aa21.18■□□□□ 0.98
C19orf54-202ENST00000469741 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
C19orf54-202ENST00000469741 ARHGEF10O15013 1369 aa21.17■□□□□ 0.98
C19orf54-202ENST00000469741 MARF1Q9Y4F3 1742 aaKnown RBP21.17■□□□□ 0.98
C19orf54-202ENST00000469741 NRKQ7Z2Y5 1582 aa21.17■□□□□ 0.98
C19orf54-202ENST00000469741 MON2Q7Z3U7 1717 aa21.17■□□□□ 0.98
C19orf54-202ENST00000469741 ZC3H6P61129 1189 aaKnown RBP21.16■□□□□ 0.98
C19orf54-202ENST00000469741 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
C19orf54-202ENST00000469741 PPP2R1AP30153 589 aa21.15■□□□□ 0.98
C19orf54-202ENST00000469741 FBLN1P23142 703 aa21.15■□□□□ 0.98
C19orf54-202ENST00000469741 CHRNA2Q15822 529 aa21.15■□□□□ 0.98
C19orf54-202ENST00000469741 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
C19orf54-202ENST00000469741 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.98
C19orf54-202ENST00000469741 SOX12O15370 315 aa21.14■□□□□ 0.97
C19orf54-202ENST00000469741 HAP1P54257 671 aaPredicted RBP21.14■□□□□ 0.97
C19orf54-202ENST00000469741 NLRP6P59044 892 aa21.14■□□□□ 0.97
C19orf54-202ENST00000469741 EP400Q96L91 3159 aa21.13■□□□□ 0.97
C19orf54-202ENST00000469741 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
C19orf54-202ENST00000469741 BCL9LQ86UU0 1499 aa21.12■□□□□ 0.97
C19orf54-202ENST00000469741 FNBP4Q8N3X1 1017 aaPredicted RBP21.11■□□□□ 0.97
C19orf54-202ENST00000469741 USP19O94966 1318 aa21.11■□□□□ 0.97
C19orf54-202ENST00000469741 GCP02774 474 aa21.1■□□□□ 0.97
C19orf54-202ENST00000469741 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
C19orf54-202ENST00000469741 HDGFL2Q7Z4V5 671 aaPredicted RBP21.1■□□□□ 0.97
C19orf54-202ENST00000469741 KIAA0232Q92628 1395 aa21.1■□□□□ 0.97
C19orf54-202ENST00000469741 USP21Q9UK80 565 aa21.1■□□□□ 0.97
C19orf54-202ENST00000469741 TERF2IPQ9NYB0 399 aa21.09■□□□□ 0.97
C19orf54-202ENST00000469741 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
C19orf54-202ENST00000469741 QTRT2Q9H974 415 aaKnown RBP21.08■□□□□ 0.97
C19orf54-202ENST00000469741 ANKRD36BQ8N2N9 1353 aa21.08■□□□□ 0.97
C19orf54-202ENST00000469741 SLIT2O94813 1529 aa21.07■□□□□ 0.96
C19orf54-202ENST00000469741 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
C19orf54-202ENST00000469741 EDC4Q6P2E9 1401 aaKnown RBP21.06■□□□□ 0.96
C19orf54-202ENST00000469741 PLCH1Q4KWH8 1693 aa21.06■□□□□ 0.96
C19orf54-202ENST00000469741 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms