RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
CBWD3-205ENST00000469687 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
CBWD3-205ENST00000469687 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
CBWD3-205ENST00000469687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
CBWD3-205ENST00000469687 KIF13AQ9H1H9 1805 aa18.95■□□□□ 0.62
CBWD3-205ENST00000469687 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
CBWD3-205ENST00000469687 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
CBWD3-205ENST00000469687 TRIM35Q9UPQ4 493 aa18.95■□□□□ 0.62
CBWD3-205ENST00000469687 DLC1Q96QB1 1528 aa18.94■□□□□ 0.62
CBWD3-205ENST00000469687 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
CBWD3-205ENST00000469687 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
CBWD3-205ENST00000469687 METP08581 1390 aa18.92■□□□□ 0.62
CBWD3-205ENST00000469687 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
CBWD3-205ENST00000469687 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
CBWD3-205ENST00000469687 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
CBWD3-205ENST00000469687 PNPLA6Q8IY17 1366 aa18.91■□□□□ 0.62
CBWD3-205ENST00000469687 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
CBWD3-205ENST00000469687 ZMYM3Q14202 1370 aa18.9■□□□□ 0.62
CBWD3-205ENST00000469687 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
CBWD3-205ENST00000469687 EXOSC9Q06265 439 aaKnown RBP18.89■□□□□ 0.62
CBWD3-205ENST00000469687 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.62
CBWD3-205ENST00000469687 LAS1LQ9Y4W2 734 aaKnown RBP18.89■□□□□ 0.62
CBWD3-205ENST00000469687 ATP7BP35670 1465 aa18.89■□□□□ 0.61
CBWD3-205ENST00000469687 NCKAP5LQ9HCH0 1330 aa18.89■□□□□ 0.61
CBWD3-205ENST00000469687 RIPK4P57078 832 aa18.88■□□□□ 0.61
CBWD3-205ENST00000469687 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
CBWD3-205ENST00000469687 VIRMAQ69YN4 1812 aaKnown RBP18.88■□□□□ 0.61
CBWD3-205ENST00000469687 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
CBWD3-205ENST00000469687 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
CBWD3-205ENST00000469687 PPIP5K1Q6PFW1 1433 aa18.86■□□□□ 0.61
CBWD3-205ENST00000469687 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
CBWD3-205ENST00000469687 SLC4A3P48751 1232 aa18.86■□□□□ 0.61
CBWD3-205ENST00000469687 NME9Q86XW9 330 aa18.85■□□□□ 0.61
CBWD3-205ENST00000469687 ESF1Q9H501 851 aaKnown RBP18.85■□□□□ 0.61
CBWD3-205ENST00000469687 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
CBWD3-205ENST00000469687 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
CBWD3-205ENST00000469687 SSH1Q8WYL5 1049 aa18.84■□□□□ 0.61
CBWD3-205ENST00000469687 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
CBWD3-205ENST00000469687 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
CBWD3-205ENST00000469687 CPSF1Q10570 1443 aaKnown RBP18.84■□□□□ 0.61
CBWD3-205ENST00000469687 PRKAR2BP31323 418 aa18.83■□□□□ 0.61
CBWD3-205ENST00000469687 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.61
CBWD3-205ENST00000469687 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.61
CBWD3-205ENST00000469687 ZKSCAN2Q63HK3 967 aa18.83■□□□□ 0.61
CBWD3-205ENST00000469687 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
CBWD3-205ENST00000469687 HMOX1P09601 288 aa18.82■□□□□ 0.6
CBWD3-205ENST00000469687 FAM135BQ49AJ0 1406 aa18.82■□□□□ 0.6
CBWD3-205ENST00000469687 TRIM27P14373 513 aa18.82■□□□□ 0.6
CBWD3-205ENST00000469687 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
CBWD3-205ENST00000469687 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
CBWD3-205ENST00000469687 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
CBWD3-205ENST00000469687 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
CBWD3-205ENST00000469687 EDC4Q6P2E9 1401 aaKnown RBP18.81■□□□□ 0.6
CBWD3-205ENST00000469687 KNDC1Q76NI1 1749 aa18.81■□□□□ 0.6
CBWD3-205ENST00000469687 FCHSD2O94868 740 aa18.81■□□□□ 0.6
CBWD3-205ENST00000469687 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
CBWD3-205ENST00000469687 CPS1P31327 1500 aa18.81■□□□□ 0.6
CBWD3-205ENST00000469687 CT47B1P0C2W7 299 aaPredicted RBP18.81■□□□□ 0.6
CBWD3-205ENST00000469687 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
CBWD3-205ENST00000469687 IL16Q14005 1332 aa18.8■□□□□ 0.6
CBWD3-205ENST00000469687 TNRQ92752 1358 aa18.8■□□□□ 0.6
CBWD3-205ENST00000469687 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
CBWD3-205ENST00000469687 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
CBWD3-205ENST00000469687 SEC24BO95487 1268 aa18.79■□□□□ 0.6
CBWD3-205ENST00000469687 AAMPQ13685 434 aa18.79■□□□□ 0.6
CBWD3-205ENST00000469687 RTL5Q5HYW3 569 aaPredicted RBP18.79■□□□□ 0.6
CBWD3-205ENST00000469687 NOB1Q9ULX3 412 aaKnown RBP18.79■□□□□ 0.6
CBWD3-205ENST00000469687 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
CBWD3-205ENST00000469687 THUMPD2Q9BTF0 503 aaKnown RBP18.78■□□□□ 0.6
CBWD3-205ENST00000469687 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
CBWD3-205ENST00000469687 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
CBWD3-205ENST00000469687 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
CBWD3-205ENST00000469687 USP19O94966 1318 aa18.77■□□□□ 0.6
CBWD3-205ENST00000469687 TECPR2O15040 1411 aa18.77■□□□□ 0.6
CBWD3-205ENST00000469687 AKAP12Q02952 1782 aa18.77■□□□□ 0.6
CBWD3-205ENST00000469687 IL13P35225 146 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 ATF7IPQ6VMQ6 1270 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 TMEM2Q9UHN6 1383 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 ITSN1Q15811 1721 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 NEFMP07197 916 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
CBWD3-205ENST00000469687 C3P01024 1663 aa18.75■□□□□ 0.59
CBWD3-205ENST00000469687 DLG5Q8TDM6 1919 aa18.75■□□□□ 0.59
CBWD3-205ENST00000469687 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
CBWD3-205ENST00000469687 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
CBWD3-205ENST00000469687 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
CBWD3-205ENST00000469687 TMEM57Q8N5G2 664 aa18.74■□□□□ 0.59
CBWD3-205ENST00000469687 NFE2L2Q16236 605 aa18.73■□□□□ 0.59
CBWD3-205ENST00000469687 COG3Q96JB2 828 aa18.73■□□□□ 0.59
CBWD3-205ENST00000469687 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.73■□□□□ 0.59
CBWD3-205ENST00000469687 NUTM2FA1L443 756 aa18.72■□□□□ 0.59
CBWD3-205ENST00000469687 LTKP29376 864 aa18.72■□□□□ 0.59
CBWD3-205ENST00000469687 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
CBWD3-205ENST00000469687 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
CBWD3-205ENST00000469687 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
CBWD3-205ENST00000469687 CEBPAP49715 358 aaPredicted RBP18.71■□□□□ 0.59
CBWD3-205ENST00000469687 DDX19BQ9UMR2 479 aa18.71■□□□□ 0.59
CBWD3-205ENST00000469687 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms