RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
FN1-216ENST00000469569 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
FN1-216ENST00000469569 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
FN1-216ENST00000469569 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
FN1-216ENST00000469569 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
FN1-216ENST00000469569 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
FN1-216ENST00000469569 SBNO2Q9Y2G9 1366 aa12.87□□□□□ -0.35
FN1-216ENST00000469569 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
FN1-216ENST00000469569 FOXO3O43524 673 aa12.87□□□□□ -0.35
FN1-216ENST00000469569 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
FN1-216ENST00000469569 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
FN1-216ENST00000469569 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
FN1-216ENST00000469569 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
FN1-216ENST00000469569 COL16A1Q07092 1604 aaPredicted RBP12.85□□□□□ -0.35
FN1-216ENST00000469569 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
FN1-216ENST00000469569 SRPK2P78362 688 aaKnown RBP12.85□□□□□ -0.35
FN1-216ENST00000469569 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
FN1-216ENST00000469569 KRT28Q7Z3Y7 464 aa12.84□□□□□ -0.35
FN1-216ENST00000469569 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
FN1-216ENST00000469569 PLEKHG3A1L390 1219 aa12.83□□□□□ -0.36
FN1-216ENST00000469569 NUBP1P53384 320 aa12.83□□□□□ -0.36
FN1-216ENST00000469569 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
FN1-216ENST00000469569 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
FN1-216ENST00000469569 POTEHQ6S545 545 aa12.82□□□□□ -0.36
FN1-216ENST00000469569 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 DDX17Q92841 729 aaKnown RBP12.81□□□□□ -0.36
FN1-216ENST00000469569 SPATA31A3Q5VYP0 1347 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
FN1-216ENST00000469569 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
FN1-216ENST00000469569 PXDNQ92626 1479 aa12.8□□□□□ -0.36
FN1-216ENST00000469569 MEX3CQ5U5Q3 659 aaKnown RBP12.8□□□□□ -0.36
FN1-216ENST00000469569 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
FN1-216ENST00000469569 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
FN1-216ENST00000469569 ATP7BP35670 1465 aa12.79□□□□□ -0.36
FN1-216ENST00000469569 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
FN1-216ENST00000469569 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
FN1-216ENST00000469569 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
FN1-216ENST00000469569 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
FN1-216ENST00000469569 USP47Q96K76 1375 aa12.78□□□□□ -0.36
FN1-216ENST00000469569 TMF1P82094 1093 aa12.77□□□□□ -0.37
FN1-216ENST00000469569 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
FN1-216ENST00000469569 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
FN1-216ENST00000469569 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
FN1-216ENST00000469569 ACEP12821 1306 aa12.77□□□□□ -0.37
FN1-216ENST00000469569 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.37
FN1-216ENST00000469569 TNS3Q68CZ2 1445 aa12.77□□□□□ -0.37
FN1-216ENST00000469569 USP32Q8NFA0 1604 aa12.77□□□□□ -0.37
FN1-216ENST00000469569 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
FN1-216ENST00000469569 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
FN1-216ENST00000469569 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
FN1-216ENST00000469569 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
FN1-216ENST00000469569 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
FN1-216ENST00000469569 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
FN1-216ENST00000469569 RGPD8O14715 1765 aaPredicted RBP12.75□□□□□ -0.37
FN1-216ENST00000469569 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
FN1-216ENST00000469569 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
FN1-216ENST00000469569 EIF4G2P78344 907 aaKnown RBP eCLIP12.75□□□□□ -0.37
FN1-216ENST00000469569 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
FN1-216ENST00000469569 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
FN1-216ENST00000469569 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
FN1-216ENST00000469569 TESK2Q96S53 571 aa12.74□□□□□ -0.37
FN1-216ENST00000469569 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
FN1-216ENST00000469569 HDGFL2Q7Z4V5 671 aaPredicted RBP12.73□□□□□ -0.37
FN1-216ENST00000469569 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
FN1-216ENST00000469569 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
FN1-216ENST00000469569 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
FN1-216ENST00000469569 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
FN1-216ENST00000469569 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.37
FN1-216ENST00000469569 GSE1Q14687 1217 aa12.71□□□□□ -0.37
FN1-216ENST00000469569 TMC1Q8TDI8 760 aa12.71□□□□□ -0.37
FN1-216ENST00000469569 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
FN1-216ENST00000469569 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
FN1-216ENST00000469569 USP6P35125 1406 aa12.7□□□□□ -0.38
FN1-216ENST00000469569 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
FN1-216ENST00000469569 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
FN1-216ENST00000469569 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
FN1-216ENST00000469569 LRP6O75581 1613 aa12.69□□□□□ -0.38
FN1-216ENST00000469569 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
FN1-216ENST00000469569 AFF2P51816 1311 aa12.68□□□□□ -0.38
FN1-216ENST00000469569 CPSF1Q10570 1443 aaKnown RBP12.68□□□□□ -0.38
FN1-216ENST00000469569 TRPM3Q9HCF6 1732 aaPredicted RBP12.67□□□□□ -0.38
FN1-216ENST00000469569 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
FN1-216ENST00000469569 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
FN1-216ENST00000469569 NLRP6P59044 892 aa12.66□□□□□ -0.38
FN1-216ENST00000469569 KCNH5Q8NCM2 988 aa12.66□□□□□ -0.38
FN1-216ENST00000469569 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
FN1-216ENST00000469569 RGS17Q9UGC6 210 aaPredicted RBP12.66□□□□□ -0.38
FN1-216ENST00000469569 USP21Q9UK80 565 aa12.66□□□□□ -0.38
FN1-216ENST00000469569 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
FN1-216ENST00000469569 ALS2Q96Q42 1657 aa12.65□□□□□ -0.38
FN1-216ENST00000469569 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.38
FN1-216ENST00000469569 RXRBP28702 533 aa12.65□□□□□ -0.38
FN1-216ENST00000469569 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
FN1-216ENST00000469569 EDC4Q6P2E9 1401 aaKnown RBP12.64□□□□□ -0.39
FN1-216ENST00000469569 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms