RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 TOPAZ1Q8N9V7 1692 aa18.93■□□□□ 0.62
LMNA-210ENST00000469565 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
LMNA-210ENST00000469565 CCDC125Q86Z20 511 aa18.93■□□□□ 0.62
LMNA-210ENST00000469565 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
LMNA-210ENST00000469565 PSME1Q06323 249 aa18.92■□□□□ 0.62
LMNA-210ENST00000469565 FNBP4Q8N3X1 1017 aaPredicted RBP18.92■□□□□ 0.62
LMNA-210ENST00000469565 ACEP12821 1306 aa18.92■□□□□ 0.62
LMNA-210ENST00000469565 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
LMNA-210ENST00000469565 SOS2Q07890 1332 aaPredicted RBP18.91■□□□□ 0.62
LMNA-210ENST00000469565 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
LMNA-210ENST00000469565 KRT28Q7Z3Y7 464 aa18.89■□□□□ 0.61
LMNA-210ENST00000469565 KIF7Q2M1P5 1343 aa18.89■□□□□ 0.61
LMNA-210ENST00000469565 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
LMNA-210ENST00000469565 ATRNO75882 1429 aa18.88■□□□□ 0.61
LMNA-210ENST00000469565 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
LMNA-210ENST00000469565 CCDC7Q96M83 1385 aa18.86■□□□□ 0.61
LMNA-210ENST00000469565 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
LMNA-210ENST00000469565 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
LMNA-210ENST00000469565 AKAP12Q02952 1782 aa18.86■□□□□ 0.61
LMNA-210ENST00000469565 NINLQ9Y2I6 1382 aa18.85■□□□□ 0.61
LMNA-210ENST00000469565 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
LMNA-210ENST00000469565 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
LMNA-210ENST00000469565 POLR3AO14802 1390 aaPredicted RBP18.84■□□□□ 0.61
LMNA-210ENST00000469565 MYOM1P52179 1685 aa18.84■□□□□ 0.61
LMNA-210ENST00000469565 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
LMNA-210ENST00000469565 COL22A1Q8NFW1 1626 aaPredicted RBP18.83■□□□□ 0.61
LMNA-210ENST00000469565 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
LMNA-210ENST00000469565 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
LMNA-210ENST00000469565 EP400Q96L91 3159 aa18.81■□□□□ 0.6
LMNA-210ENST00000469565 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
LMNA-210ENST00000469565 GJD4Q96KN9 370 aaPredicted RBP18.81■□□□□ 0.6
LMNA-210ENST00000469565 PANK3Q9H999 370 aa18.81■□□□□ 0.6
LMNA-210ENST00000469565 BCL9LQ86UU0 1499 aa18.81■□□□□ 0.6
LMNA-210ENST00000469565 PXDNQ92626 1479 aa18.81■□□□□ 0.6
LMNA-210ENST00000469565 CD163L1Q9NR16 1453 aa18.8■□□□□ 0.6
LMNA-210ENST00000469565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.8■□□□□ 0.6
LMNA-210ENST00000469565 USP6P35125 1406 aa18.8■□□□□ 0.6
LMNA-210ENST00000469565 CPSF1Q10570 1443 aaKnown RBP18.8■□□□□ 0.6
LMNA-210ENST00000469565 ANKRD36BQ8N2N9 1353 aa18.8■□□□□ 0.6
LMNA-210ENST00000469565 MON2Q7Z3U7 1717 aa18.79■□□□□ 0.6
LMNA-210ENST00000469565 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
LMNA-210ENST00000469565 NUTM2GQ5VZR2 741 aa18.78■□□□□ 0.6
LMNA-210ENST00000469565 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.6
LMNA-210ENST00000469565 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
LMNA-210ENST00000469565 ABTB2Q8N961 1025 aa18.77■□□□□ 0.6
LMNA-210ENST00000469565 SBNO1A3KN83 1393 aa18.77■□□□□ 0.6
LMNA-210ENST00000469565 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
LMNA-210ENST00000469565 BLMP54132 1417 aaPredicted RBP18.75■□□□□ 0.59
LMNA-210ENST00000469565 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
LMNA-210ENST00000469565 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
LMNA-210ENST00000469565 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
LMNA-210ENST00000469565 SF3B2Q13435 895 aaKnown RBP18.74■□□□□ 0.59
LMNA-210ENST00000469565 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
LMNA-210ENST00000469565 BRD4O60885 1362 aaPredicted RBP18.73■□□□□ 0.59
LMNA-210ENST00000469565 UNC5CLQ8IV45 518 aa18.73■□□□□ 0.59
LMNA-210ENST00000469565 NSD3Q9BZ95 1437 aa18.73■□□□□ 0.59
LMNA-210ENST00000469565 TTC21AQ8NDW8 1320 aa18.73■□□□□ 0.59
LMNA-210ENST00000469565 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
LMNA-210ENST00000469565 ARHGEF10O15013 1369 aa18.72■□□□□ 0.59
LMNA-210ENST00000469565 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
LMNA-210ENST00000469565 NLRP6P59044 892 aa18.72■□□□□ 0.59
LMNA-210ENST00000469565 NME9Q86XW9 330 aa18.72■□□□□ 0.59
LMNA-210ENST00000469565 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
LMNA-210ENST00000469565 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
LMNA-210ENST00000469565 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
LMNA-210ENST00000469565 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
LMNA-210ENST00000469565 NLRP13Q86W25 1043 aa18.71■□□□□ 0.59
LMNA-210ENST00000469565 CABLES1Q8TDN4 633 aa18.71■□□□□ 0.59
LMNA-210ENST00000469565 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
LMNA-210ENST00000469565 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
LMNA-210ENST00000469565 KIF20BQ96Q89 1820 aa18.69■□□□□ 0.58
LMNA-210ENST00000469565 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
LMNA-210ENST00000469565 GLI3P10071 1580 aa18.68■□□□□ 0.58
LMNA-210ENST00000469565 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
LMNA-210ENST00000469565 PIK3C2AO00443 1686 aa18.68■□□□□ 0.58
LMNA-210ENST00000469565 SLIT2O94813 1529 aa18.68■□□□□ 0.58
LMNA-210ENST00000469565 FYB1O15117 783 aa18.67■□□□□ 0.58
LMNA-210ENST00000469565 SOX12O15370 315 aa18.67■□□□□ 0.58
LMNA-210ENST00000469565 COG3Q96JB2 828 aa18.67■□□□□ 0.58
LMNA-210ENST00000469565 BRWD3Q6RI45 1802 aa18.66■□□□□ 0.58
LMNA-210ENST00000469565 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
LMNA-210ENST00000469565 LRP5O75197 1615 aa18.66■□□□□ 0.58
LMNA-210ENST00000469565 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
LMNA-210ENST00000469565 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
LMNA-210ENST00000469565 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
LMNA-210ENST00000469565 ABCA3Q99758 1704 aa18.61■□□□□ 0.57
LMNA-210ENST00000469565 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
LMNA-210ENST00000469565 GCP02774 474 aa18.61■□□□□ 0.57
LMNA-210ENST00000469565 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
LMNA-210ENST00000469565 VPS72Q15906 364 aa18.61■□□□□ 0.57
LMNA-210ENST00000469565 KRT27Q7Z3Y8 459 aa18.61■□□□□ 0.57
LMNA-210ENST00000469565 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
LMNA-210ENST00000469565 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
LMNA-210ENST00000469565 USP19O94966 1318 aa18.6■□□□□ 0.57
LMNA-210ENST00000469565 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
LMNA-210ENST00000469565 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
LMNA-210ENST00000469565 TNNT2P45379 298 aaPredicted RBP18.59■□□□□ 0.57
LMNA-210ENST00000469565 BAG6P46379 1132 aa18.59■□□□□ 0.57
LMNA-210ENST00000469565 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
LMNA-210ENST00000469565 MORC1Q86VD1 984 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms