RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
TRAF4-208ENST00000469529 NUTM2FA1L443 756 aa17.27■□□□□ 0.36
TRAF4-208ENST00000469529 USP6P35125 1406 aa17.27■□□□□ 0.35
TRAF4-208ENST00000469529 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
TRAF4-208ENST00000469529 MST1RQ04912 1400 aa17.26■□□□□ 0.35
TRAF4-208ENST00000469529 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
TRAF4-208ENST00000469529 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
TRAF4-208ENST00000469529 PMFBP1Q8TBY8 1022 aa17.25■□□□□ 0.35
TRAF4-208ENST00000469529 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
TRAF4-208ENST00000469529 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
TRAF4-208ENST00000469529 ORAI2Q96SN7 254 aa17.23■□□□□ 0.35
TRAF4-208ENST00000469529 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
TRAF4-208ENST00000469529 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
TRAF4-208ENST00000469529 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
TRAF4-208ENST00000469529 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
TRAF4-208ENST00000469529 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
TRAF4-208ENST00000469529 MRS2Q9HD23 443 aa17.21■□□□□ 0.35
TRAF4-208ENST00000469529 AATKQ6ZMQ8 1374 aa17.2■□□□□ 0.34
TRAF4-208ENST00000469529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAF4-208ENST00000469529 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
TRAF4-208ENST00000469529 JCADQ9P266 1359 aa17.19■□□□□ 0.34
TRAF4-208ENST00000469529 COL16A1Q07092 1604 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-208ENST00000469529 AHDC1Q5TGY3 1603 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-208ENST00000469529 SOCS7O14512 581 aa17.19■□□□□ 0.34
TRAF4-208ENST00000469529 PSME1Q06323 249 aa17.19■□□□□ 0.34
TRAF4-208ENST00000469529 COG3Q96JB2 828 aa17.19■□□□□ 0.34
TRAF4-208ENST00000469529 AKAP12Q02952 1782 aa17.19■□□□□ 0.34
TRAF4-208ENST00000469529 INSRP06213 1382 aa17.18■□□□□ 0.34
TRAF4-208ENST00000469529 NME9Q86XW9 330 aa17.18■□□□□ 0.34
TRAF4-208ENST00000469529 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
TRAF4-208ENST00000469529 FOXO3O43524 673 aa17.17■□□□□ 0.34
TRAF4-208ENST00000469529 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
TRAF4-208ENST00000469529 NPHP3Q7Z494 1330 aa17.16■□□□□ 0.34
TRAF4-208ENST00000469529 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
TRAF4-208ENST00000469529 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
TRAF4-208ENST00000469529 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
TRAF4-208ENST00000469529 OVOS2A0A0J9YW53 1432 aa17.14■□□□□ 0.33
TRAF4-208ENST00000469529 OVOS2Q6IE36 1432 aa17.14■□□□□ 0.33
TRAF4-208ENST00000469529 MTHFSP49914 203 aa17.14■□□□□ 0.33
TRAF4-208ENST00000469529 NRKQ7Z2Y5 1582 aa17.14■□□□□ 0.33
TRAF4-208ENST00000469529 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
TRAF4-208ENST00000469529 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-208ENST00000469529 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
TRAF4-208ENST00000469529 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
TRAF4-208ENST00000469529 RGS17Q9UGC6 210 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-208ENST00000469529 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
TRAF4-208ENST00000469529 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
TRAF4-208ENST00000469529 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
TRAF4-208ENST00000469529 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-208ENST00000469529 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
TRAF4-208ENST00000469529 NLRP6P59044 892 aa17.1■□□□□ 0.33
TRAF4-208ENST00000469529 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
TRAF4-208ENST00000469529 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
TRAF4-208ENST00000469529 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
TRAF4-208ENST00000469529 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
TRAF4-208ENST00000469529 ANKRD26Q9UPS8 1709 aa17.08■□□□□ 0.32
TRAF4-208ENST00000469529 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-208ENST00000469529 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-208ENST00000469529 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
TRAF4-208ENST00000469529 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.32
TRAF4-208ENST00000469529 LRP6O75581 1613 aa17.07■□□□□ 0.32
TRAF4-208ENST00000469529 USP19O94966 1318 aa17.06■□□□□ 0.32
TRAF4-208ENST00000469529 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
TRAF4-208ENST00000469529 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
TRAF4-208ENST00000469529 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
TRAF4-208ENST00000469529 USP54Q70EL1 1684 aa17.06■□□□□ 0.32
TRAF4-208ENST00000469529 PXDNQ92626 1479 aa17.05■□□□□ 0.32
TRAF4-208ENST00000469529 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
TRAF4-208ENST00000469529 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-208ENST00000469529 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-208ENST00000469529 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
TRAF4-208ENST00000469529 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-208ENST00000469529 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
TRAF4-208ENST00000469529 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
TRAF4-208ENST00000469529 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
TRAF4-208ENST00000469529 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
TRAF4-208ENST00000469529 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
TRAF4-208ENST00000469529 GCP02774 474 aa17.02■□□□□ 0.32
TRAF4-208ENST00000469529 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRAF4-208ENST00000469529 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
TRAF4-208ENST00000469529 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
TRAF4-208ENST00000469529 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-208ENST00000469529 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-208ENST00000469529 FBLN1P23142 703 aa17.01■□□□□ 0.31
TRAF4-208ENST00000469529 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-208ENST00000469529 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
TRAF4-208ENST00000469529 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
TRAF4-208ENST00000469529 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
TRAF4-208ENST00000469529 IL13P35225 146 aa17■□□□□ 0.31
TRAF4-208ENST00000469529 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
TRAF4-208ENST00000469529 NGEFQ8N5V2 710 aa17■□□□□ 0.31
TRAF4-208ENST00000469529 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
TRAF4-208ENST00000469529 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
TRAF4-208ENST00000469529 SLIT3O75094 1523 aa16.99■□□□□ 0.31
TRAF4-208ENST00000469529 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-208ENST00000469529 IP6K1Q92551 441 aa16.98■□□□□ 0.31
TRAF4-208ENST00000469529 RTL1A6NKG5 1358 aa16.98■□□□□ 0.31
TRAF4-208ENST00000469529 FLT4P35916 1363 aa16.98■□□□□ 0.31
TRAF4-208ENST00000469529 FCHSD2O94868 740 aa16.97■□□□□ 0.31
TRAF4-208ENST00000469529 PNNQ9H307 717 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms