RNA–Protein interactions for RNA: ENST00000469354.1

EPHA4-211, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 2,893 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-211ENST00000469354 RRP7AQ9Y3A4 280 aaKnown RBP11.31□□□□□ -0.6
EPHA4-211ENST00000469354 ROBO2Q9HCK4 1378 aa11.31□□□□□ -0.6
EPHA4-211ENST00000469354 PLEKHG1Q9ULL1 1385 aa11.31□□□□□ -0.6
EPHA4-211ENST00000469354 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
EPHA4-211ENST00000469354 PLIN1O60240 522 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 FBLN1P23142 703 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
EPHA4-211ENST00000469354 DUSP27Q5VZP5 1158 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 PPIP5K1Q6PFW1 1433 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
EPHA4-211ENST00000469354 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
EPHA4-211ENST00000469354 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
EPHA4-211ENST00000469354 CCDC136Q96JN2 1154 aa11.29□□□□□ -0.6
EPHA4-211ENST00000469354 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
EPHA4-211ENST00000469354 BRD2P25440 801 aaKnown RBP11.29□□□□□ -0.6
EPHA4-211ENST00000469354 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
EPHA4-211ENST00000469354 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
EPHA4-211ENST00000469354 TECPR2O15040 1411 aa11.28□□□□□ -0.6
EPHA4-211ENST00000469354 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
EPHA4-211ENST00000469354 TCP11L2Q8N4U5 519 aa11.28□□□□□ -0.6
EPHA4-211ENST00000469354 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
EPHA4-211ENST00000469354 TAF7LQ5H9L4 462 aa11.27□□□□□ -0.6
EPHA4-211ENST00000469354 NME9Q86XW9 330 aa11.27□□□□□ -0.6
EPHA4-211ENST00000469354 EXOC6Q8TAG9 804 aa11.27□□□□□ -0.61
EPHA4-211ENST00000469354 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
EPHA4-211ENST00000469354 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
EPHA4-211ENST00000469354 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
EPHA4-211ENST00000469354 TBX22Q9Y458 520 aa11.26□□□□□ -0.61
EPHA4-211ENST00000469354 ATP7BP35670 1465 aa11.26□□□□□ -0.61
EPHA4-211ENST00000469354 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
EPHA4-211ENST00000469354 SHPRHQ149N8 1683 aa11.26□□□□□ -0.61
EPHA4-211ENST00000469354 CPS1P31327 1500 aa11.26□□□□□ -0.61
EPHA4-211ENST00000469354 E9PSI1 815 aa11.25□□□□□ -0.61
EPHA4-211ENST00000469354 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
EPHA4-211ENST00000469354 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
EPHA4-211ENST00000469354 KNDC1Q76NI1 1749 aa11.25□□□□□ -0.61
EPHA4-211ENST00000469354 SLIT1O75093 1534 aa11.25□□□□□ -0.61
EPHA4-211ENST00000469354 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
EPHA4-211ENST00000469354 CPSF1Q10570 1443 aaKnown RBP11.24□□□□□ -0.61
EPHA4-211ENST00000469354 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
EPHA4-211ENST00000469354 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
EPHA4-211ENST00000469354 MED14O60244 1454 aa11.24□□□□□ -0.61
EPHA4-211ENST00000469354 COG3Q96JB2 828 aa11.23□□□□□ -0.61
EPHA4-211ENST00000469354 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
EPHA4-211ENST00000469354 ADRA2BP18089 450 aa11.23□□□□□ -0.61
EPHA4-211ENST00000469354 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
EPHA4-211ENST00000469354 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
EPHA4-211ENST00000469354 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
EPHA4-211ENST00000469354 PMFBP1Q8TBY8 1022 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 ACEP12821 1306 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.22□□□□□ -0.61
EPHA4-211ENST00000469354 KCNA6P17658 529 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 C20orf194Q5TEA3 1177 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 KIF20BQ96Q89 1820 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 ANKLE2Q86XL3 938 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 CRBNQ96SW2 442 aa11.22□□□□□ -0.61
EPHA4-211ENST00000469354 MAPK8IP3Q9UPT6 1336 aa11.21□□□□□ -0.61
EPHA4-211ENST00000469354 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.61
EPHA4-211ENST00000469354 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
EPHA4-211ENST00000469354 NKTRP30414 1462 aaKnown RBP11.21□□□□□ -0.62
EPHA4-211ENST00000469354 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
EPHA4-211ENST00000469354 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
EPHA4-211ENST00000469354 SOX12O15370 315 aa11.2□□□□□ -0.62
EPHA4-211ENST00000469354 BCAR3O75815 825 aa11.2□□□□□ -0.62
EPHA4-211ENST00000469354 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
EPHA4-211ENST00000469354 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
EPHA4-211ENST00000469354 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.19□□□□□ -0.62
EPHA4-211ENST00000469354 TTC21BQ7Z4L5 1316 aa11.19□□□□□ -0.62
EPHA4-211ENST00000469354 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
EPHA4-211ENST00000469354 HMOX1P09601 288 aa11.19□□□□□ -0.62
EPHA4-211ENST00000469354 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
EPHA4-211ENST00000469354 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
EPHA4-211ENST00000469354 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
EPHA4-211ENST00000469354 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
EPHA4-211ENST00000469354 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
EPHA4-211ENST00000469354 MAP2P11137 1827 aaKnown RBP11.18□□□□□ -0.62
EPHA4-211ENST00000469354 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
EPHA4-211ENST00000469354 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
EPHA4-211ENST00000469354 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
EPHA4-211ENST00000469354 NEFMP07197 916 aa11.17□□□□□ -0.62
EPHA4-211ENST00000469354 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
EPHA4-211ENST00000469354 RIPK4P57078 832 aa11.17□□□□□ -0.62
EPHA4-211ENST00000469354 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
EPHA4-211ENST00000469354 PNNQ9H307 717 aaKnown RBP11.17□□□□□ -0.62
EPHA4-211ENST00000469354 FCHSD2O94868 740 aa11.16□□□□□ -0.62
EPHA4-211ENST00000469354 CANXP27824 592 aaKnown RBP11.16□□□□□ -0.62
EPHA4-211ENST00000469354 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
EPHA4-211ENST00000469354 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
EPHA4-211ENST00000469354 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
EPHA4-211ENST00000469354 MYH16Q9H6N6 1097 aa11.16□□□□□ -0.62
EPHA4-211ENST00000469354 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
EPHA4-211ENST00000469354 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
EPHA4-211ENST00000469354 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.62
EPHA4-211ENST00000469354 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
EPHA4-211ENST00000469354 USP6P35125 1406 aa11.15□□□□□ -0.62
EPHA4-211ENST00000469354 FRAT1Q92837 279 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms