RNA–Protein interactions for RNA: ENST00000468886.5

GCOM1-205, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-205ENST00000468886 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
GCOM1-205ENST00000468886 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
GCOM1-205ENST00000468886 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
GCOM1-205ENST00000468886 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
GCOM1-205ENST00000468886 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
GCOM1-205ENST00000468886 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.6
GCOM1-205ENST00000468886 CDK19Q9BWU1 502 aa18.82■□□□□ 0.6
GCOM1-205ENST00000468886 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
GCOM1-205ENST00000468886 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
GCOM1-205ENST00000468886 SMC4Q9NTJ3 1288 aa18.82■□□□□ 0.6
GCOM1-205ENST00000468886 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
GCOM1-205ENST00000468886 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
GCOM1-205ENST00000468886 DIAPH1O60610 1272 aaKnown RBP18.81■□□□□ 0.6
GCOM1-205ENST00000468886 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
GCOM1-205ENST00000468886 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
GCOM1-205ENST00000468886 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
GCOM1-205ENST00000468886 ZMYM3Q14202 1370 aa18.8■□□□□ 0.6
GCOM1-205ENST00000468886 TSPOAP1O95153 1857 aa18.8■□□□□ 0.6
GCOM1-205ENST00000468886 USP19O94966 1318 aa18.79■□□□□ 0.6
GCOM1-205ENST00000468886 IL16Q14005 1332 aa18.79■□□□□ 0.6
GCOM1-205ENST00000468886 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
GCOM1-205ENST00000468886 RIPK4P57078 832 aa18.78■□□□□ 0.6
GCOM1-205ENST00000468886 SEC24BO95487 1268 aa18.77■□□□□ 0.6
GCOM1-205ENST00000468886 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
GCOM1-205ENST00000468886 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.59
GCOM1-205ENST00000468886 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
GCOM1-205ENST00000468886 SSH1Q8WYL5 1049 aa18.76■□□□□ 0.59
GCOM1-205ENST00000468886 REREQ9P2R6 1566 aa18.76■□□□□ 0.59
GCOM1-205ENST00000468886 CDC42BPGQ6DT37 1551 aa18.76■□□□□ 0.59
GCOM1-205ENST00000468886 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
GCOM1-205ENST00000468886 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
GCOM1-205ENST00000468886 DIP2BQ9P265 1576 aa18.75■□□□□ 0.59
GCOM1-205ENST00000468886 TRIM27P14373 513 aa18.75■□□□□ 0.59
GCOM1-205ENST00000468886 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
GCOM1-205ENST00000468886 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
GCOM1-205ENST00000468886 ATP7BP35670 1465 aa18.75■□□□□ 0.59
GCOM1-205ENST00000468886 AGLP35573 1532 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 BECN1Q14457 450 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
GCOM1-205ENST00000468886 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
GCOM1-205ENST00000468886 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
GCOM1-205ENST00000468886 ATF7IPQ6VMQ6 1270 aa18.73■□□□□ 0.59
GCOM1-205ENST00000468886 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
GCOM1-205ENST00000468886 SPATA31D1Q6ZQQ2 1576 aa18.73■□□□□ 0.59
GCOM1-205ENST00000468886 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
GCOM1-205ENST00000468886 FCHSD2O94868 740 aa18.72■□□□□ 0.59
GCOM1-205ENST00000468886 NOB1Q9ULX3 412 aaKnown RBP18.72■□□□□ 0.59
GCOM1-205ENST00000468886 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
GCOM1-205ENST00000468886 FAM135BQ49AJ0 1406 aa18.7■□□□□ 0.58
GCOM1-205ENST00000468886 PRKAR2BP31323 418 aa18.7■□□□□ 0.58
GCOM1-205ENST00000468886 GSE1Q14687 1217 aa18.7■□□□□ 0.58
GCOM1-205ENST00000468886 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
GCOM1-205ENST00000468886 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
GCOM1-205ENST00000468886 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
GCOM1-205ENST00000468886 POLKQ9UBT6 870 aa18.69■□□□□ 0.58
GCOM1-205ENST00000468886 TMEM57Q8N5G2 664 aa18.68■□□□□ 0.58
GCOM1-205ENST00000468886 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
GCOM1-205ENST00000468886 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
GCOM1-205ENST00000468886 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
GCOM1-205ENST00000468886 FBLN1P23142 703 aa18.67■□□□□ 0.58
GCOM1-205ENST00000468886 MLECQ14165 292 aa18.67■□□□□ 0.58
GCOM1-205ENST00000468886 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
GCOM1-205ENST00000468886 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
GCOM1-205ENST00000468886 NRXN3Q9Y4C0 1643 aa18.66■□□□□ 0.58
GCOM1-205ENST00000468886 HMOX1P09601 288 aa18.64■□□□□ 0.57
GCOM1-205ENST00000468886 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
GCOM1-205ENST00000468886 WASLO00401 505 aaPredicted RBP18.64■□□□□ 0.57
GCOM1-205ENST00000468886 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
GCOM1-205ENST00000468886 ZBTB40Q9NUA8 1239 aa18.63■□□□□ 0.57
GCOM1-205ENST00000468886 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
GCOM1-205ENST00000468886 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
GCOM1-205ENST00000468886 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
GCOM1-205ENST00000468886 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
GCOM1-205ENST00000468886 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
GCOM1-205ENST00000468886 SMC5Q8IY18 1101 aa18.62■□□□□ 0.57
GCOM1-205ENST00000468886 KNDC1Q76NI1 1749 aa18.62■□□□□ 0.57
GCOM1-205ENST00000468886 MON2Q7Z3U7 1717 aa18.62■□□□□ 0.57
GCOM1-205ENST00000468886 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
GCOM1-205ENST00000468886 ITSN1Q15811 1721 aa18.61■□□□□ 0.57
GCOM1-205ENST00000468886 NME9Q86XW9 330 aa18.61■□□□□ 0.57
GCOM1-205ENST00000468886 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
GCOM1-205ENST00000468886 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
GCOM1-205ENST00000468886 METP08581 1390 aa18.6■□□□□ 0.57
GCOM1-205ENST00000468886 IL13P35225 146 aa18.59■□□□□ 0.57
GCOM1-205ENST00000468886 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
GCOM1-205ENST00000468886 AKAP12Q02952 1782 aa18.59■□□□□ 0.57
GCOM1-205ENST00000468886 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
GCOM1-205ENST00000468886 GNAI1P63096 354 aa18.59■□□□□ 0.57
GCOM1-205ENST00000468886 TXNDC2Q86VQ3 553 aa18.59■□□□□ 0.57
GCOM1-205ENST00000468886 COG3Q96JB2 828 aa18.59■□□□□ 0.57
GCOM1-205ENST00000468886 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
GCOM1-205ENST00000468886 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
GCOM1-205ENST00000468886 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.57
GCOM1-205ENST00000468886 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms