RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
SSBP1-206ENST00000467681 LRP6O75581 1613 aa18.99■□□□□ 0.63
SSBP1-206ENST00000467681 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
SSBP1-206ENST00000467681 HDGFL2Q7Z4V5 671 aaPredicted RBP18.98■□□□□ 0.63
SSBP1-206ENST00000467681 USP6P35125 1406 aa18.98■□□□□ 0.63
SSBP1-206ENST00000467681 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
SSBP1-206ENST00000467681 NUTM2GQ5VZR2 741 aa18.97■□□□□ 0.63
SSBP1-206ENST00000467681 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
SSBP1-206ENST00000467681 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
SSBP1-206ENST00000467681 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
SSBP1-206ENST00000467681 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
SSBP1-206ENST00000467681 NLRP13Q86W25 1043 aa18.96■□□□□ 0.63
SSBP1-206ENST00000467681 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
SSBP1-206ENST00000467681 HAP1P54257 671 aaPredicted RBP18.95■□□□□ 0.62
SSBP1-206ENST00000467681 C8orf37Q96NL8 207 aa18.95■□□□□ 0.62
SSBP1-206ENST00000467681 C11orf95C9JLR9 678 aaPredicted RBP18.94■□□□□ 0.62
SSBP1-206ENST00000467681 NLRP6P59044 892 aa18.94■□□□□ 0.62
SSBP1-206ENST00000467681 TRPM3Q9HCF6 1732 aaPredicted RBP18.94■□□□□ 0.62
SSBP1-206ENST00000467681 COL22A1Q8NFW1 1626 aaPredicted RBP18.93■□□□□ 0.62
SSBP1-206ENST00000467681 FNBP4Q8N3X1 1017 aaPredicted RBP18.93■□□□□ 0.62
SSBP1-206ENST00000467681 TTC21AQ8NDW8 1320 aa18.93■□□□□ 0.62
SSBP1-206ENST00000467681 CD163L1Q9NR16 1453 aa18.92■□□□□ 0.62
SSBP1-206ENST00000467681 ZNF772Q68DY9 489 aaPredicted RBP18.92■□□□□ 0.62
SSBP1-206ENST00000467681 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
SSBP1-206ENST00000467681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.62
SSBP1-206ENST00000467681 AFF2P51816 1311 aa18.91■□□□□ 0.62
SSBP1-206ENST00000467681 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
SSBP1-206ENST00000467681 POLR3GLQ9BT43 218 aa18.9■□□□□ 0.62
SSBP1-206ENST00000467681 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
SSBP1-206ENST00000467681 ALS2Q96Q42 1657 aa18.89■□□□□ 0.61
SSBP1-206ENST00000467681 GCP02774 474 aa18.89■□□□□ 0.61
SSBP1-206ENST00000467681 USP19O94966 1318 aa18.89■□□□□ 0.61
SSBP1-206ENST00000467681 ANKRD36BQ8N2N9 1353 aa18.88■□□□□ 0.61
SSBP1-206ENST00000467681 ZEB1P37275 1124 aaPredicted RBP18.87■□□□□ 0.61
SSBP1-206ENST00000467681 NME9Q86XW9 330 aa18.87■□□□□ 0.61
SSBP1-206ENST00000467681 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
SSBP1-206ENST00000467681 ZRANB1Q9UGI0 708 aa18.87■□□□□ 0.61
SSBP1-206ENST00000467681 USP21Q9UK80 565 aa18.87■□□□□ 0.61
SSBP1-206ENST00000467681 EDC4Q6P2E9 1401 aaKnown RBP18.86■□□□□ 0.61
SSBP1-206ENST00000467681 ZC3H6P61129 1189 aaKnown RBP18.86■□□□□ 0.61
SSBP1-206ENST00000467681 QTRT2Q9H974 415 aaKnown RBP18.86■□□□□ 0.61
SSBP1-206ENST00000467681 USP31Q70CQ4 1352 aa18.85■□□□□ 0.61
SSBP1-206ENST00000467681 ILDR2Q71H61 639 aa18.85■□□□□ 0.61
SSBP1-206ENST00000467681 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
SSBP1-206ENST00000467681 PRDM11Q9NQV5 511 aa18.84■□□□□ 0.61
SSBP1-206ENST00000467681 AKAP12Q02952 1782 aa18.83■□□□□ 0.61
SSBP1-206ENST00000467681 KIF7Q2M1P5 1343 aa18.83■□□□□ 0.61
SSBP1-206ENST00000467681 FYB1O15117 783 aa18.83■□□□□ 0.6
SSBP1-206ENST00000467681 KCNH5Q8NCM2 988 aa18.83■□□□□ 0.6
SSBP1-206ENST00000467681 PANK3Q9H999 370 aa18.82■□□□□ 0.6
SSBP1-206ENST00000467681 TRPC5Q9UL62 973 aaPredicted RBP18.82■□□□□ 0.6
SSBP1-206ENST00000467681 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
SSBP1-206ENST00000467681 RXRBP28702 533 aa18.81■□□□□ 0.6
SSBP1-206ENST00000467681 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
SSBP1-206ENST00000467681 BCL9LQ86UU0 1499 aa18.81■□□□□ 0.6
SSBP1-206ENST00000467681 CPDO75976 1380 aa18.81■□□□□ 0.6
SSBP1-206ENST00000467681 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
SSBP1-206ENST00000467681 SLIT2O94813 1529 aa18.79■□□□□ 0.6
SSBP1-206ENST00000467681 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
SSBP1-206ENST00000467681 ARHGEF25Q86VW2 580 aa18.79■□□□□ 0.6
SSBP1-206ENST00000467681 MON2Q7Z3U7 1717 aa18.78■□□□□ 0.6
SSBP1-206ENST00000467681 COG3Q96JB2 828 aa18.78■□□□□ 0.6
SSBP1-206ENST00000467681 SOX12O15370 315 aa18.77■□□□□ 0.6
SSBP1-206ENST00000467681 VPS72Q15906 364 aa18.77■□□□□ 0.6
SSBP1-206ENST00000467681 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.6
SSBP1-206ENST00000467681 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
SSBP1-206ENST00000467681 GJD4Q96KN9 370 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-206ENST00000467681 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
SSBP1-206ENST00000467681 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
SSBP1-206ENST00000467681 EVA1CP58658 441 aa18.75■□□□□ 0.59
SSBP1-206ENST00000467681 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 ATRNO75882 1429 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 SLIT3O75094 1523 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 NRKQ7Z2Y5 1582 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
SSBP1-206ENST00000467681 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
SSBP1-206ENST00000467681 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
SSBP1-206ENST00000467681 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
SSBP1-206ENST00000467681 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
SSBP1-206ENST00000467681 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
SSBP1-206ENST00000467681 FBLN1P23142 703 aa18.71■□□□□ 0.59
SSBP1-206ENST00000467681 STRN4Q9NRL3 753 aa18.71■□□□□ 0.59
SSBP1-206ENST00000467681 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.59
SSBP1-206ENST00000467681 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.59
SSBP1-206ENST00000467681 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
SSBP1-206ENST00000467681 MYOM1P52179 1685 aa18.69■□□□□ 0.58
SSBP1-206ENST00000467681 COL14A1Q05707 1796 aaKnown RBP18.69■□□□□ 0.58
SSBP1-206ENST00000467681 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-206ENST00000467681 PHRF1Q9P1Y6 1649 aaKnown RBP18.69■□□□□ 0.58
SSBP1-206ENST00000467681 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
SSBP1-206ENST00000467681 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
SSBP1-206ENST00000467681 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
SSBP1-206ENST00000467681 CAMTA1Q9Y6Y1 1673 aa18.68■□□□□ 0.58
SSBP1-206ENST00000467681 IP6K1Q92551 441 aa18.67■□□□□ 0.58
SSBP1-206ENST00000467681 NFAT5O94916 1531 aa18.67■□□□□ 0.58
SSBP1-206ENST00000467681 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
SSBP1-206ENST00000467681 MAP3K19Q56UN5 1328 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms