RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 AFF2P51816 1311 aa13.91□□□□□ -0.18
ZC3HC1-204ENST00000467642 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
ZC3HC1-204ENST00000467642 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
ZC3HC1-204ENST00000467642 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
ZC3HC1-204ENST00000467642 TRPM3Q9HCF6 1732 aaPredicted RBP13.88□□□□□ -0.19
ZC3HC1-204ENST00000467642 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
ZC3HC1-204ENST00000467642 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
ZC3HC1-204ENST00000467642 USP47Q96K76 1375 aa13.88□□□□□ -0.19
ZC3HC1-204ENST00000467642 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
ZC3HC1-204ENST00000467642 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
ZC3HC1-204ENST00000467642 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
ZC3HC1-204ENST00000467642 TMC1Q8TDI8 760 aa13.86□□□□□ -0.19
ZC3HC1-204ENST00000467642 TESK2Q96S53 571 aa13.86□□□□□ -0.19
ZC3HC1-204ENST00000467642 USP21Q9UK80 565 aa13.86□□□□□ -0.19
ZC3HC1-204ENST00000467642 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
ZC3HC1-204ENST00000467642 QTRT2Q9H974 415 aaKnown RBP13.86□□□□□ -0.19
ZC3HC1-204ENST00000467642 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
ZC3HC1-204ENST00000467642 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
ZC3HC1-204ENST00000467642 RXRBP28702 533 aa13.84□□□□□ -0.19
ZC3HC1-204ENST00000467642 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.19
ZC3HC1-204ENST00000467642 USP6P35125 1406 aa13.83□□□□□ -0.2
ZC3HC1-204ENST00000467642 SOCS7O14512 581 aa13.83□□□□□ -0.2
ZC3HC1-204ENST00000467642 TMF1P82094 1093 aa13.83□□□□□ -0.2
ZC3HC1-204ENST00000467642 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
ZC3HC1-204ENST00000467642 BRD4O60885 1362 aaPredicted RBP13.82□□□□□ -0.2
ZC3HC1-204ENST00000467642 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
ZC3HC1-204ENST00000467642 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
ZC3HC1-204ENST00000467642 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
ZC3HC1-204ENST00000467642 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
ZC3HC1-204ENST00000467642 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
ZC3HC1-204ENST00000467642 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
ZC3HC1-204ENST00000467642 NLRP6P59044 892 aa13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 CPSF1Q10570 1443 aaKnown RBP13.8□□□□□ -0.2
ZC3HC1-204ENST00000467642 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
ZC3HC1-204ENST00000467642 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
ZC3HC1-204ENST00000467642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZC3HC1-204ENST00000467642 SSH2Q76I76 1423 aa13.78□□□□□ -0.2
ZC3HC1-204ENST00000467642 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
ZC3HC1-204ENST00000467642 SLIT2O94813 1529 aa13.78□□□□□ -0.2
ZC3HC1-204ENST00000467642 BTG4Q9NY30 223 aa13.78□□□□□ -0.2
ZC3HC1-204ENST00000467642 GCP02774 474 aa13.77□□□□□ -0.21
ZC3HC1-204ENST00000467642 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.21
ZC3HC1-204ENST00000467642 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 SUPT16HQ9Y5B9 1047 aaKnown RBP13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 CRYBG1Q9Y4K1 1723 aa13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 ATRNO75882 1429 aa13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 GJD4Q96KN9 370 aaPredicted RBP13.76□□□□□ -0.21
ZC3HC1-204ENST00000467642 USP19O94966 1318 aa13.75□□□□□ -0.21
ZC3HC1-204ENST00000467642 A0A1W2PP64 1363 aa13.75□□□□□ -0.21
ZC3HC1-204ENST00000467642 PHRF1Q9P1Y6 1649 aaKnown RBP13.75□□□□□ -0.21
ZC3HC1-204ENST00000467642 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
ZC3HC1-204ENST00000467642 POLR3GLQ9BT43 218 aa13.74□□□□□ -0.21
ZC3HC1-204ENST00000467642 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
ZC3HC1-204ENST00000467642 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
ZC3HC1-204ENST00000467642 MON2Q7Z3U7 1717 aa13.74□□□□□ -0.21
ZC3HC1-204ENST00000467642 COL14A1Q05707 1796 aaKnown RBP13.74□□□□□ -0.21
ZC3HC1-204ENST00000467642 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
ZC3HC1-204ENST00000467642 SOX12O15370 315 aa13.73□□□□□ -0.21
ZC3HC1-204ENST00000467642 VPS72Q15906 364 aa13.73□□□□□ -0.21
ZC3HC1-204ENST00000467642 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
ZC3HC1-204ENST00000467642 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
ZC3HC1-204ENST00000467642 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
ZC3HC1-204ENST00000467642 NME9Q86XW9 330 aa13.72□□□□□ -0.21
ZC3HC1-204ENST00000467642 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
ZC3HC1-204ENST00000467642 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
ZC3HC1-204ENST00000467642 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
ZC3HC1-204ENST00000467642 EVA1CP58658 441 aa13.72□□□□□ -0.21
ZC3HC1-204ENST00000467642 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
ZC3HC1-204ENST00000467642 STRN4Q9NRL3 753 aa13.71□□□□□ -0.21
ZC3HC1-204ENST00000467642 CPDO75976 1380 aa13.71□□□□□ -0.21
ZC3HC1-204ENST00000467642 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
ZC3HC1-204ENST00000467642 RGS12O14924 1447 aa13.71□□□□□ -0.22
ZC3HC1-204ENST00000467642 SLIT3O75094 1523 aa13.69□□□□□ -0.22
ZC3HC1-204ENST00000467642 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
ZC3HC1-204ENST00000467642 NRAPQ86VF7 1730 aa13.68□□□□□ -0.22
ZC3HC1-204ENST00000467642 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
ZC3HC1-204ENST00000467642 A0A0G2JS52 829 aa13.68□□□□□ -0.22
ZC3HC1-204ENST00000467642 GLI3P10071 1580 aa13.67□□□□□ -0.22
ZC3HC1-204ENST00000467642 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
ZC3HC1-204ENST00000467642 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
ZC3HC1-204ENST00000467642 COG3Q96JB2 828 aa13.67□□□□□ -0.22
ZC3HC1-204ENST00000467642 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
ZC3HC1-204ENST00000467642 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
ZC3HC1-204ENST00000467642 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
ZC3HC1-204ENST00000467642 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
ZC3HC1-204ENST00000467642 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
ZC3HC1-204ENST00000467642 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms