RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 PANK3Q9H999 370 aa18.27■□□□□ 0.52
PDCD11-202ENST00000466959 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
PDCD11-202ENST00000466959 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
PDCD11-202ENST00000466959 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
PDCD11-202ENST00000466959 USP6P35125 1406 aa18.24■□□□□ 0.51
PDCD11-202ENST00000466959 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
PDCD11-202ENST00000466959 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
PDCD11-202ENST00000466959 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
PDCD11-202ENST00000466959 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
PDCD11-202ENST00000466959 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
PDCD11-202ENST00000466959 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
PDCD11-202ENST00000466959 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
PDCD11-202ENST00000466959 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
PDCD11-202ENST00000466959 BRD4O60885 1362 aaPredicted RBP18.22■□□□□ 0.51
PDCD11-202ENST00000466959 KIF20BQ96Q89 1820 aa18.22■□□□□ 0.51
PDCD11-202ENST00000466959 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
PDCD11-202ENST00000466959 PXDNQ92626 1479 aa18.21■□□□□ 0.51
PDCD11-202ENST00000466959 FOXO3O43524 673 aa18.21■□□□□ 0.51
PDCD11-202ENST00000466959 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
PDCD11-202ENST00000466959 PSME1Q06323 249 aa18.2■□□□□ 0.5
PDCD11-202ENST00000466959 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
PDCD11-202ENST00000466959 PER1O15534 1290 aaPredicted RBP18.19■□□□□ 0.5
PDCD11-202ENST00000466959 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
PDCD11-202ENST00000466959 KRT28Q7Z3Y7 464 aa18.18■□□□□ 0.5
PDCD11-202ENST00000466959 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
PDCD11-202ENST00000466959 ALS2Q96Q42 1657 aa18.18■□□□□ 0.5
PDCD11-202ENST00000466959 AFF2P51816 1311 aa18.18■□□□□ 0.5
PDCD11-202ENST00000466959 TTC21BQ7Z4L5 1316 aa18.18■□□□□ 0.5
PDCD11-202ENST00000466959 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
PDCD11-202ENST00000466959 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
PDCD11-202ENST00000466959 TTC21AQ8NDW8 1320 aa18.17■□□□□ 0.5
PDCD11-202ENST00000466959 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
PDCD11-202ENST00000466959 SOS2Q07890 1332 aaPredicted RBP18.16■□□□□ 0.5
PDCD11-202ENST00000466959 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
PDCD11-202ENST00000466959 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
PDCD11-202ENST00000466959 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
PDCD11-202ENST00000466959 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
PDCD11-202ENST00000466959 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
PDCD11-202ENST00000466959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDCD11-202ENST00000466959 NSD2O96028 1365 aa18.14■□□□□ 0.49
PDCD11-202ENST00000466959 TNS3Q68CZ2 1445 aa18.14■□□□□ 0.49
PDCD11-202ENST00000466959 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
PDCD11-202ENST00000466959 RBM6P78332 1123 aaKnown RBP18.13■□□□□ 0.49
PDCD11-202ENST00000466959 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
PDCD11-202ENST00000466959 C8orf37Q96NL8 207 aa18.12■□□□□ 0.49
PDCD11-202ENST00000466959 FYB1O15117 783 aa18.11■□□□□ 0.49
PDCD11-202ENST00000466959 NME9Q86XW9 330 aa18.11■□□□□ 0.49
PDCD11-202ENST00000466959 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
PDCD11-202ENST00000466959 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
PDCD11-202ENST00000466959 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
PDCD11-202ENST00000466959 RGS12O14924 1447 aa18.1■□□□□ 0.49
PDCD11-202ENST00000466959 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
PDCD11-202ENST00000466959 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
PDCD11-202ENST00000466959 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
PDCD11-202ENST00000466959 OVOS2A0A0J9YW53 1432 aa18.09■□□□□ 0.49
PDCD11-202ENST00000466959 OVOS2Q6IE36 1432 aa18.09■□□□□ 0.49
PDCD11-202ENST00000466959 ARHGEF10O15013 1369 aa18.09■□□□□ 0.49
PDCD11-202ENST00000466959 ABTB2Q8N961 1025 aa18.08■□□□□ 0.48
PDCD11-202ENST00000466959 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
PDCD11-202ENST00000466959 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
PDCD11-202ENST00000466959 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
PDCD11-202ENST00000466959 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
PDCD11-202ENST00000466959 COL22A1Q8NFW1 1626 aaPredicted RBP18.06■□□□□ 0.48
PDCD11-202ENST00000466959 PHRF1Q9P1Y6 1649 aaKnown RBP18.06■□□□□ 0.48
PDCD11-202ENST00000466959 COG3Q96JB2 828 aa18.06■□□□□ 0.48
PDCD11-202ENST00000466959 ABCA3Q99758 1704 aa18.06■□□□□ 0.48
PDCD11-202ENST00000466959 SLIT3O75094 1523 aa18.05■□□□□ 0.48
PDCD11-202ENST00000466959 NLRP6P59044 892 aa18.05■□□□□ 0.48
PDCD11-202ENST00000466959 LMOD2Q6P5Q4 547 aa18.05■□□□□ 0.48
PDCD11-202ENST00000466959 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
PDCD11-202ENST00000466959 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
PDCD11-202ENST00000466959 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
PDCD11-202ENST00000466959 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
PDCD11-202ENST00000466959 USP19O94966 1318 aa18.03■□□□□ 0.48
PDCD11-202ENST00000466959 ANP32CO43423 234 aa18.03■□□□□ 0.48
PDCD11-202ENST00000466959 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
PDCD11-202ENST00000466959 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
PDCD11-202ENST00000466959 RALBP1Q15311 655 aa18.02■□□□□ 0.48
PDCD11-202ENST00000466959 PRKRIP1Q9H875 184 aaPredicted RBP18.02■□□□□ 0.48
PDCD11-202ENST00000466959 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.47
PDCD11-202ENST00000466959 NFAT5O94916 1531 aa18.01■□□□□ 0.47
PDCD11-202ENST00000466959 ADAMTS2O95450 1211 aa18■□□□□ 0.47
PDCD11-202ENST00000466959 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
PDCD11-202ENST00000466959 TRPC5Q9UL62 973 aaPredicted RBP17.98■□□□□ 0.47
PDCD11-202ENST00000466959 AATKQ6ZMQ8 1374 aa17.98■□□□□ 0.47
PDCD11-202ENST00000466959 LTN1O94822 1766 aa17.98■□□□□ 0.47
PDCD11-202ENST00000466959 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
PDCD11-202ENST00000466959 USP21Q9UK80 565 aa17.97■□□□□ 0.47
PDCD11-202ENST00000466959 GCP02774 474 aa17.96■□□□□ 0.47
PDCD11-202ENST00000466959 TNNT2P45379 298 aaPredicted RBP17.96■□□□□ 0.47
PDCD11-202ENST00000466959 MYBBP1AQ9BQG0 1328 aaKnown RBP17.96■□□□□ 0.46
PDCD11-202ENST00000466959 CCDC125Q86Z20 511 aa17.95■□□□□ 0.46
PDCD11-202ENST00000466959 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
PDCD11-202ENST00000466959 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
PDCD11-202ENST00000466959 SOX12O15370 315 aa17.94■□□□□ 0.46
PDCD11-202ENST00000466959 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
PDCD11-202ENST00000466959 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
PDCD11-202ENST00000466959 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
PDCD11-202ENST00000466959 FBLN1P23142 703 aa17.92■□□□□ 0.46
PDCD11-202ENST00000466959 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms