RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-211	ENST00000466912	ITSN1	Q15811	1721 aa		14	□□□□□ -0.17
PTPN20-211	ENST00000466912	LRP6	O75581	1613 aa		14	□□□□□ -0.17
PTPN20-211	ENST00000466912	ARHGEF10	O15013	1369 aa		13.99	□□□□□ -0.17
PTPN20-211	ENST00000466912	SHPRH	Q149N8	1683 aa		13.99	□□□□□ -0.17
PTPN20-211	ENST00000466912	PAK3	O75914	559 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN20-211	ENST00000466912	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN20-211	ENST00000466912	NUTM2E	B1AL46	878 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN20-211	ENST00000466912	LMOD2	Q6P5Q4	547 aa		13.98	□□□□□ -0.17
PTPN20-211	ENST00000466912	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN20-211	ENST00000466912	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN20-211	ENST00000466912		A0A1W2PP64	1363 aa		13.97	□□□□□ -0.17
PTPN20-211	ENST00000466912	TTC21B	Q7Z4L5	1316 aa		13.97	□□□□□ -0.17
PTPN20-211	ENST00000466912	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN20-211	ENST00000466912	CABLES1	Q8TDN4	633 aa		13.97	□□□□□ -0.17
PTPN20-211	ENST00000466912	TERF2IP	Q9NYB0	399 aa		13.97	□□□□□ -0.17
PTPN20-211	ENST00000466912	KTN1	Q86UP2	1357 aa	Known RBP	13.96	□□□□□ -0.17
PTPN20-211	ENST00000466912	MED1	Q15648	1581 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN20-211	ENST00000466912	ZEB1	P37275	1124 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN20-211	ENST00000466912	ABTB2	Q8N961	1025 aa		13.96	□□□□□ -0.17
PTPN20-211	ENST00000466912	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN20-211	ENST00000466912	ANKRD36B	Q8N2N9	1353 aa		13.96	□□□□□ -0.18
PTPN20-211	ENST00000466912	NUTM2G	Q5VZR2	741 aa		13.95	□□□□□ -0.18
PTPN20-211	ENST00000466912	RGS17	Q9UGC6	210 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN20-211	ENST00000466912	KIF7	Q2M1P5	1343 aa		13.94	□□□□□ -0.18
PTPN20-211	ENST00000466912	TTC21A	Q8NDW8	1320 aa		13.94	□□□□□ -0.18
PTPN20-211	ENST00000466912	ADAMTS2	O95450	1211 aa		13.94	□□□□□ -0.18
PTPN20-211	ENST00000466912	ALS2	Q96Q42	1657 aa		13.94	□□□□□ -0.18
PTPN20-211	ENST00000466912	USP19	O94966	1318 aa		13.93	□□□□□ -0.18
PTPN20-211	ENST00000466912	EDC4	Q6P2E9	1401 aa	Known RBP	13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	PLEKHG5	O94827	1062 aa		13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	MEX3C	Q5U5Q3	659 aa	Known RBP	13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	NLRP13	Q86W25	1043 aa		13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	POLR3GL	Q9BT43	218 aa		13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	CARD14	Q9BXL6	1004 aa		13.92	□□□□□ -0.18
PTPN20-211	ENST00000466912	NLRP6	P59044	892 aa		13.91	□□□□□ -0.18
PTPN20-211	ENST00000466912	NME9	Q86XW9	330 aa		13.91	□□□□□ -0.18
PTPN20-211	ENST00000466912	C8orf37	Q96NL8	207 aa		13.91	□□□□□ -0.18
PTPN20-211	ENST00000466912	ZRANB1	Q9UGI0	708 aa		13.91	□□□□□ -0.18
PTPN20-211	ENST00000466912	USP31	Q70CQ4	1352 aa		13.91	□□□□□ -0.18
PTPN20-211	ENST00000466912	WASHC2A	Q641Q2	1341 aa		13.9	□□□□□ -0.18
PTPN20-211	ENST00000466912	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN20-211	ENST00000466912	AKAP12	Q02952	1782 aa		13.89	□□□□□ -0.19
PTPN20-211	ENST00000466912	NRK	Q7Z2Y5	1582 aa		13.89	□□□□□ -0.19
PTPN20-211	ENST00000466912	FAM83G	A6ND36	823 aa		13.89	□□□□□ -0.19
PTPN20-211	ENST00000466912	GC	P02774	474 aa		13.89	□□□□□ -0.19
PTPN20-211	ENST00000466912	HAP1	P54257	671 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN20-211	ENST00000466912	CCDC7	Q96M83	1385 aa		13.88	□□□□□ -0.19
PTPN20-211	ENST00000466912	MON2	Q7Z3U7	1717 aa		13.88	□□□□□ -0.19
PTPN20-211	ENST00000466912	NGLY1	Q96IV0	654 aa		13.88	□□□□□ -0.19
PTPN20-211	ENST00000466912	PANK3	Q9H999	370 aa		13.88	□□□□□ -0.19
PTPN20-211	ENST00000466912	AFF2	P51816	1311 aa		13.88	□□□□□ -0.19
PTPN20-211	ENST00000466912	FYB1	O15117	783 aa		13.87	□□□□□ -0.19
PTPN20-211	ENST00000466912	PIK3C2A	O00443	1686 aa		13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	MYOM1	P52179	1685 aa		13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	ZC3H6	P61129	1189 aa	Known RBP	13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	POTEA	Q6S8J7	498 aa		13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	OVOS2	A0A0J9YW53	1432 aa		13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	OVOS2	Q6IE36	1432 aa		13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	NSD3	Q9BZ95	1437 aa		13.86	□□□□□ -0.19
PTPN20-211	ENST00000466912	SLIT3	O75094	1523 aa		13.85	□□□□□ -0.19
PTPN20-211	ENST00000466912	SLIT2	O94813	1529 aa		13.85	□□□□□ -0.19
PTPN20-211	ENST00000466912	CPD	O75976	1380 aa		13.85	□□□□□ -0.19
PTPN20-211	ENST00000466912	KIAA0232	Q92628	1395 aa		13.85	□□□□□ -0.19
PTPN20-211	ENST00000466912	ZNF772	Q68DY9	489 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN20-211	ENST00000466912	BCL9L	Q86UU0	1499 aa		13.85	□□□□□ -0.19
PTPN20-211	ENST00000466912	CRYBG1	Q9Y4K1	1723 aa		13.84	□□□□□ -0.19
PTPN20-211	ENST00000466912	C1QBP	Q07021	282 aa	Known RBP	13.84	□□□□□ -0.19
PTPN20-211	ENST00000466912	KCNH5	Q8NCM2	988 aa		13.84	□□□□□ -0.19
PTPN20-211	ENST00000466912	GGNBP2	Q9H3C7	697 aa		13.84	□□□□□ -0.19
PTPN20-211	ENST00000466912	PRDM11	Q9NQV5	511 aa		13.84	□□□□□ -0.19
PTPN20-211	ENST00000466912	USP21	Q9UK80	565 aa		13.84	□□□□□ -0.19
PTPN20-211	ENST00000466912	CHRNA2	Q15822	529 aa		13.83	□□□□□ -0.2
PTPN20-211	ENST00000466912	ARHGEF25	Q86VW2	580 aa		13.83	□□□□□ -0.2
PTPN20-211	ENST00000466912	UNC5CL	Q8IV45	518 aa		13.83	□□□□□ -0.2
PTPN20-211	ENST00000466912	ABCA3	Q99758	1704 aa		13.83	□□□□□ -0.2
PTPN20-211	ENST00000466912	PER1	O15534	1290 aa	Predicted RBP	13.82	□□□□□ -0.2
PTPN20-211	ENST00000466912	COG3	Q96JB2	828 aa		13.82	□□□□□ -0.2
PTPN20-211	ENST00000466912	CGNL1	Q0VF96	1302 aa		13.82	□□□□□ -0.2
PTPN20-211	ENST00000466912	SOX12	O15370	315 aa		13.81	□□□□□ -0.2
PTPN20-211	ENST00000466912	QTRT2	Q9H974	415 aa	Known RBP	13.81	□□□□□ -0.2
PTPN20-211	ENST00000466912	BTG4	Q9NY30	223 aa		13.81	□□□□□ -0.2
PTPN20-211	ENST00000466912	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.81	□□□□□ -0.2
PTPN20-211	ENST00000466912	NFAT5	O94916	1531 aa		13.8	□□□□□ -0.2
PTPN20-211	ENST00000466912	FBLN1	P23142	703 aa		13.8	□□□□□ -0.2
PTPN20-211	ENST00000466912	TRPC5	Q9UL62	973 aa	Predicted RBP	13.8	□□□□□ -0.2
PTPN20-211	ENST00000466912	MARF1	Q9Y4F3	1742 aa	Known RBP	13.8	□□□□□ -0.2
PTPN20-211	ENST00000466912	AATK	Q6ZMQ8	1374 aa		13.8	□□□□□ -0.2
PTPN20-211	ENST00000466912	ATRN	O75882	1429 aa		13.8	□□□□□ -0.2
PTPN20-211	ENST00000466912	USP54	Q70EL1	1684 aa		13.79	□□□□□ -0.2
PTPN20-211	ENST00000466912	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN20-211	ENST00000466912	ILDR2	Q71H61	639 aa		13.79	□□□□□ -0.2
PTPN20-211	ENST00000466912	AXIN2	Q9Y2T1	843 aa		13.79	□□□□□ -0.2
PTPN20-211	ENST00000466912	DCAF8L1	A6NGE4	600 aa		13.78	□□□□□ -0.2
PTPN20-211	ENST00000466912	VPS72	Q15906	364 aa		13.78	□□□□□ -0.2
PTPN20-211	ENST00000466912	KNSTRN	Q9Y448	316 aa		13.78	□□□□□ -0.2
PTPN20-211	ENST00000466912	CAMTA1	Q9Y6Y1	1673 aa		13.77	□□□□□ -0.21
PTPN20-211	ENST00000466912	COL14A1	Q05707	1796 aa	Known RBP	13.76	□□□□□ -0.21
PTPN20-211	ENST00000466912	MAP3K19	Q56UN5	1328 aa		13.76	□□□□□ -0.21
PTPN20-211	ENST00000466912	ZBTB7C	A1YPR0	619 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms