RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 AFF2P51816 1311 aa20.23■□□□□ 0.83
ABCD4-204ENST00000466822 USP47Q96K76 1375 aa20.22■□□□□ 0.83
ABCD4-204ENST00000466822 TMF1P82094 1093 aa20.22■□□□□ 0.83
ABCD4-204ENST00000466822 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
ABCD4-204ENST00000466822 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
ABCD4-204ENST00000466822 TOPAZ1Q8N9V7 1692 aa20.2■□□□□ 0.82
ABCD4-204ENST00000466822 NLRP13Q86W25 1043 aa20.2■□□□□ 0.82
ABCD4-204ENST00000466822 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
ABCD4-204ENST00000466822 USP21Q9UK80 565 aa20.19■□□□□ 0.82
ABCD4-204ENST00000466822 TRPC5Q9UL62 973 aaPredicted RBP20.19■□□□□ 0.82
ABCD4-204ENST00000466822 RXRBP28702 533 aa20.18■□□□□ 0.82
ABCD4-204ENST00000466822 QTRT2Q9H974 415 aaKnown RBP20.18■□□□□ 0.82
ABCD4-204ENST00000466822 TERF2IPQ9NYB0 399 aa20.18■□□□□ 0.82
ABCD4-204ENST00000466822 USP6P35125 1406 aa20.18■□□□□ 0.82
ABCD4-204ENST00000466822 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
ABCD4-204ENST00000466822 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
ABCD4-204ENST00000466822 TRPM3Q9HCF6 1732 aaPredicted RBP20.16■□□□□ 0.82
ABCD4-204ENST00000466822 RBM6P78332 1123 aaKnown RBP20.16■□□□□ 0.82
ABCD4-204ENST00000466822 CABLES1Q8TDN4 633 aa20.16■□□□□ 0.82
ABCD4-204ENST00000466822 CPSF1Q10570 1443 aaKnown RBP20.16■□□□□ 0.82
ABCD4-204ENST00000466822 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
ABCD4-204ENST00000466822 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
ABCD4-204ENST00000466822 ALS2Q96Q42 1657 aa20.14■□□□□ 0.81
ABCD4-204ENST00000466822 SSH2Q76I76 1423 aa20.14■□□□□ 0.81
ABCD4-204ENST00000466822 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
ABCD4-204ENST00000466822 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
ABCD4-204ENST00000466822 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
ABCD4-204ENST00000466822 USP19O94966 1318 aa20.11■□□□□ 0.81
ABCD4-204ENST00000466822 FAM83GA6ND36 823 aa20.11■□□□□ 0.81
ABCD4-204ENST00000466822 NLRP6P59044 892 aa20.11■□□□□ 0.81
ABCD4-204ENST00000466822 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
ABCD4-204ENST00000466822 SLIT2O94813 1529 aa20.11■□□□□ 0.81
ABCD4-204ENST00000466822 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
ABCD4-204ENST00000466822 GCP02774 474 aa20.09■□□□□ 0.81
ABCD4-204ENST00000466822 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
ABCD4-204ENST00000466822 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
ABCD4-204ENST00000466822 BCL9LQ86UU0 1499 aa20.09■□□□□ 0.81
ABCD4-204ENST00000466822 CPDO75976 1380 aa20.08■□□□□ 0.8
ABCD4-204ENST00000466822 VPS72Q15906 364 aa20.07■□□□□ 0.8
ABCD4-204ENST00000466822 GJD4Q96KN9 370 aaPredicted RBP20.07■□□□□ 0.8
ABCD4-204ENST00000466822 ATRNO75882 1429 aa20.07■□□□□ 0.8
ABCD4-204ENST00000466822 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
ABCD4-204ENST00000466822 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
ABCD4-204ENST00000466822 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
ABCD4-204ENST00000466822 EDC4Q6P2E9 1401 aaKnown RBP20.05■□□□□ 0.8
ABCD4-204ENST00000466822 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
ABCD4-204ENST00000466822 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
ABCD4-204ENST00000466822 HSPA5P11021 654 aaKnown RBP20.03■□□□□ 0.8
ABCD4-204ENST00000466822 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
ABCD4-204ENST00000466822 ANKRD36BQ8N2N9 1353 aa20.03■□□□□ 0.8
ABCD4-204ENST00000466822 KIAA0232Q92628 1395 aa20.03■□□□□ 0.8
ABCD4-204ENST00000466822 CD163L1Q9NR16 1453 aa20.03■□□□□ 0.8
ABCD4-204ENST00000466822 A0A1W2PP64 1363 aa20.02■□□□□ 0.8
ABCD4-204ENST00000466822 NWD2Q9ULI1 1742 aa20■□□□□ 0.79
ABCD4-204ENST00000466822 ONECUT3O60422 494 aaPredicted RBP20■□□□□ 0.79
ABCD4-204ENST00000466822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
ABCD4-204ENST00000466822 AKAP12Q02952 1782 aa20■□□□□ 0.79
ABCD4-204ENST00000466822 COL14A1Q05707 1796 aaKnown RBP20■□□□□ 0.79
ABCD4-204ENST00000466822 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
ABCD4-204ENST00000466822 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.99■□□□□ 0.79
ABCD4-204ENST00000466822 AATKQ6ZMQ8 1374 aa19.98■□□□□ 0.79
ABCD4-204ENST00000466822 EVA1CP58658 441 aa19.98■□□□□ 0.79
ABCD4-204ENST00000466822 SLIT3O75094 1523 aa19.97■□□□□ 0.79
ABCD4-204ENST00000466822 CRYBG1Q9Y4K1 1723 aa19.97■□□□□ 0.79
ABCD4-204ENST00000466822 ARHGEF25Q86VW2 580 aa19.97■□□□□ 0.79
ABCD4-204ENST00000466822 CCDC9Q9Y3X0 531 aaKnown RBP19.97■□□□□ 0.79
ABCD4-204ENST00000466822 CHRNA2Q15822 529 aa19.96■□□□□ 0.79
ABCD4-204ENST00000466822 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
ABCD4-204ENST00000466822 PHRF1Q9P1Y6 1649 aaKnown RBP19.95■□□□□ 0.78
ABCD4-204ENST00000466822 NME9Q86XW9 330 aa19.95■□□□□ 0.78
ABCD4-204ENST00000466822 COG3Q96JB2 828 aa19.95■□□□□ 0.78
ABCD4-204ENST00000466822 NRKQ7Z2Y5 1582 aa19.94■□□□□ 0.78
ABCD4-204ENST00000466822 SPATA31A5Q5VU36 1347 aa19.94■□□□□ 0.78
ABCD4-204ENST00000466822 SPATA31A7Q8IWB4 1347 aa19.94■□□□□ 0.78
ABCD4-204ENST00000466822 THRAP3Q9Y2W1 955 aaKnown RBP19.93■□□□□ 0.78
ABCD4-204ENST00000466822 PIK3C2AO00443 1686 aa19.93■□□□□ 0.78
ABCD4-204ENST00000466822 RGS12O14924 1447 aa19.92■□□□□ 0.78
ABCD4-204ENST00000466822 PLCH1Q4KWH8 1693 aa19.91■□□□□ 0.78
ABCD4-204ENST00000466822 STRN4Q9NRL3 753 aa19.91■□□□□ 0.78
ABCD4-204ENST00000466822 FYB1O15117 783 aa19.9■□□□□ 0.78
ABCD4-204ENST00000466822 SPATA31A1Q5TZJ5 1347 aa19.9■□□□□ 0.78
ABCD4-204ENST00000466822 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.77
ABCD4-204ENST00000466822 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.77
ABCD4-204ENST00000466822 BARGINQ6ZT62 677 aa19.89■□□□□ 0.77
ABCD4-204ENST00000466822 SEPT12Q8IYM1 358 aa19.89■□□□□ 0.77
ABCD4-204ENST00000466822 ZRANB1Q9UGI0 708 aa19.88■□□□□ 0.77
ABCD4-204ENST00000466822 USP54Q70EL1 1684 aa19.87■□□□□ 0.77
ABCD4-204ENST00000466822 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
ABCD4-204ENST00000466822 ABCC6O95255 1503 aa19.87■□□□□ 0.77
ABCD4-204ENST00000466822 CGNL1Q0VF96 1302 aa19.87■□□□□ 0.77
ABCD4-204ENST00000466822 CCDC125Q86Z20 511 aa19.87■□□□□ 0.77
ABCD4-204ENST00000466822 CARD14Q9BXL6 1004 aa19.87■□□□□ 0.77
ABCD4-204ENST00000466822 ZBTB7CA1YPR0 619 aa19.86■□□□□ 0.77
ABCD4-204ENST00000466822 TCP11L2Q8N4U5 519 aa19.86■□□□□ 0.77
ABCD4-204ENST00000466822 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
ABCD4-204ENST00000466822 GLI3P10071 1580 aa19.86■□□□□ 0.77
ABCD4-204ENST00000466822 SOX12O15370 315 aa19.85■□□□□ 0.77
ABCD4-204ENST00000466822 FAM98CQ17RN3 349 aaKnown RBP19.85■□□□□ 0.77
ABCD4-204ENST00000466822 LARP1Q6PKG0 1096 aaKnown RBP19.85■□□□□ 0.77
ABCD4-204ENST00000466822 NFAT5O94916 1531 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms