RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 COL22A1Q8NFW1 1626 aaPredicted RBP25.59■■□□□ 1.69
HOXA9-203ENST00000465941 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
HOXA9-203ENST00000465941 ALS2Q96Q42 1657 aa25.56■■□□□ 1.68
HOXA9-203ENST00000465941 NUTM2BA6NNL0 878 aaPredicted RBP25.56■■□□□ 1.68
HOXA9-203ENST00000465941 NUTM2EB1AL46 878 aaPredicted RBP25.56■■□□□ 1.68
HOXA9-203ENST00000465941 NUTM2AQ8IVF1 878 aaPredicted RBP25.56■■□□□ 1.68
HOXA9-203ENST00000465941 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
HOXA9-203ENST00000465941 TTC21BQ7Z4L5 1316 aa25.55■■□□□ 1.68
HOXA9-203ENST00000465941 A0A1W2PP64 1363 aa25.55■■□□□ 1.68
HOXA9-203ENST00000465941 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
HOXA9-203ENST00000465941 ANKRD36BQ8N2N9 1353 aa25.54■■□□□ 1.68
HOXA9-203ENST00000465941 MED1Q15648 1581 aaPredicted RBP25.53■■□□□ 1.68
HOXA9-203ENST00000465941 LRP6O75581 1613 aa25.53■■□□□ 1.68
HOXA9-203ENST00000465941 TTC21AQ8NDW8 1320 aa25.53■■□□□ 1.68
HOXA9-203ENST00000465941 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
HOXA9-203ENST00000465941 CABLES1Q8TDN4 633 aa25.51■■□□□ 1.67
HOXA9-203ENST00000465941 EDC4Q6P2E9 1401 aaKnown RBP25.51■■□□□ 1.67
HOXA9-203ENST00000465941 KIF7Q2M1P5 1343 aa25.5■■□□□ 1.67
HOXA9-203ENST00000465941 NLRP13Q86W25 1043 aa25.5■■□□□ 1.67
HOXA9-203ENST00000465941 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
HOXA9-203ENST00000465941 NUTM2GQ5VZR2 741 aa25.49■■□□□ 1.67
HOXA9-203ENST00000465941 MEX3CQ5U5Q3 659 aaKnown RBP25.48■■□□□ 1.67
HOXA9-203ENST00000465941 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
HOXA9-203ENST00000465941 ADAMTS2O95450 1211 aa25.47■■□□□ 1.67
HOXA9-203ENST00000465941 NLRP6P59044 892 aa25.47■■□□□ 1.67
HOXA9-203ENST00000465941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.47■■□□□ 1.67
HOXA9-203ENST00000465941 MYOM1P52179 1685 aa25.46■■□□□ 1.67
HOXA9-203ENST00000465941 HAP1P54257 671 aaPredicted RBP25.46■■□□□ 1.67
HOXA9-203ENST00000465941 USP19O94966 1318 aa25.45■■□□□ 1.66
HOXA9-203ENST00000465941 PLEKHG5O94827 1062 aa25.45■■□□□ 1.66
HOXA9-203ENST00000465941 CARD14Q9BXL6 1004 aa25.44■■□□□ 1.66
HOXA9-203ENST00000465941 USP31Q70CQ4 1352 aa25.43■■□□□ 1.66
HOXA9-203ENST00000465941 WASHC2AQ641Q2 1341 aa25.42■■□□□ 1.66
HOXA9-203ENST00000465941 NME9Q86XW9 330 aa25.42■■□□□ 1.66
HOXA9-203ENST00000465941 CCDC7Q96M83 1385 aa25.42■■□□□ 1.66
HOXA9-203ENST00000465941 PIK3C2AO00443 1686 aa25.42■■□□□ 1.66
HOXA9-203ENST00000465941 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
HOXA9-203ENST00000465941 C8orf37Q96NL8 207 aa25.41■■□□□ 1.66
HOXA9-203ENST00000465941 PHF23Q9BUL5 403 aaPredicted RBP25.41■■□□□ 1.66
HOXA9-203ENST00000465941 GCP02774 474 aa25.4■■□□□ 1.66
HOXA9-203ENST00000465941 NGLY1Q96IV0 654 aa25.4■■□□□ 1.66
HOXA9-203ENST00000465941 PANK3Q9H999 370 aa25.4■■□□□ 1.66
HOXA9-203ENST00000465941 ABCA3Q99758 1704 aa25.39■■□□□ 1.65
HOXA9-203ENST00000465941 CRYBG1Q9Y4K1 1723 aa25.39■■□□□ 1.65
HOXA9-203ENST00000465941 FNBP4Q8N3X1 1017 aaPredicted RBP25.38■■□□□ 1.65
HOXA9-203ENST00000465941 ZRANB1Q9UGI0 708 aa25.38■■□□□ 1.65
HOXA9-203ENST00000465941 FYB1O15117 783 aa25.37■■□□□ 1.65
HOXA9-203ENST00000465941 RGS17Q9UGC6 210 aaPredicted RBP25.37■■□□□ 1.65
HOXA9-203ENST00000465941 FAM83GA6ND36 823 aa25.36■■□□□ 1.65
HOXA9-203ENST00000465941 KCNH5Q8NCM2 988 aa25.36■■□□□ 1.65
HOXA9-203ENST00000465941 SLIT3O75094 1523 aa25.36■■□□□ 1.65
HOXA9-203ENST00000465941 NSD3Q9BZ95 1437 aa25.36■■□□□ 1.65
HOXA9-203ENST00000465941 AFF2P51816 1311 aa25.36■■□□□ 1.65
HOXA9-203ENST00000465941 PHRF1Q9P1Y6 1649 aaKnown RBP25.34■■□□□ 1.65
HOXA9-203ENST00000465941 ZC3H6P61129 1189 aaKnown RBP25.34■■□□□ 1.65
HOXA9-203ENST00000465941 ZNF772Q68DY9 489 aaPredicted RBP25.34■■□□□ 1.65
HOXA9-203ENST00000465941 MARF1Q9Y4F3 1742 aaKnown RBP25.34■■□□□ 1.65
HOXA9-203ENST00000465941 CPDO75976 1380 aa25.33■■□□□ 1.65
HOXA9-203ENST00000465941 OVOS2A0A0J9YW53 1432 aa25.33■■□□□ 1.65
HOXA9-203ENST00000465941 OVOS2Q6IE36 1432 aa25.33■■□□□ 1.65
HOXA9-203ENST00000465941 COG3Q96JB2 828 aa25.33■■□□□ 1.65
HOXA9-203ENST00000465941 KIAA0232Q92628 1395 aa25.32■■□□□ 1.64
HOXA9-203ENST00000465941 PRDM11Q9NQV5 511 aa25.32■■□□□ 1.64
HOXA9-203ENST00000465941 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
HOXA9-203ENST00000465941 CGNL1Q0VF96 1302 aa25.32■■□□□ 1.64
HOXA9-203ENST00000465941 GGNBP2Q9H3C7 697 aa25.31■■□□□ 1.64
HOXA9-203ENST00000465941 USP21Q9UK80 565 aa25.3■■□□□ 1.64
HOXA9-203ENST00000465941 SLIT2O94813 1529 aa25.3■■□□□ 1.64
HOXA9-203ENST00000465941 BCL9LQ86UU0 1499 aa25.28■■□□□ 1.64
HOXA9-203ENST00000465941 SOCS7O14512 581 aa25.28■■□□□ 1.64
HOXA9-203ENST00000465941 PER1O15534 1290 aaPredicted RBP25.27■■□□□ 1.64
HOXA9-203ENST00000465941 CHRNA2Q15822 529 aa25.27■■□□□ 1.64
HOXA9-203ENST00000465941 ARHGEF25Q86VW2 580 aa25.27■■□□□ 1.64
HOXA9-203ENST00000465941 KNSTRNQ9Y448 316 aa25.27■■□□□ 1.64
HOXA9-203ENST00000465941 SOX12O15370 315 aa25.26■■□□□ 1.63
HOXA9-203ENST00000465941 POTEAQ6S8J7 498 aa25.26■■□□□ 1.63
HOXA9-203ENST00000465941 UNC5CLQ8IV45 518 aa25.26■■□□□ 1.63
HOXA9-203ENST00000465941 NFAT5O94916 1531 aa25.26■■□□□ 1.63
HOXA9-203ENST00000465941 COL14A1Q05707 1796 aaKnown RBP25.26■■□□□ 1.63
HOXA9-203ENST00000465941 BTG4Q9NY30 223 aa25.25■■□□□ 1.63
HOXA9-203ENST00000465941 AATKQ6ZMQ8 1374 aa25.24■■□□□ 1.63
HOXA9-203ENST00000465941 QTRT2Q9H974 415 aaKnown RBP25.24■■□□□ 1.63
HOXA9-203ENST00000465941 TRPC5Q9UL62 973 aaPredicted RBP25.23■■□□□ 1.63
HOXA9-203ENST00000465941 KIF20BQ96Q89 1820 aa25.21■■□□□ 1.63
HOXA9-203ENST00000465941 NSD2O96028 1365 aa25.21■■□□□ 1.63
HOXA9-203ENST00000465941 AMER1Q5JTC6 1135 aaPredicted RBP25.21■■□□□ 1.63
HOXA9-203ENST00000465941 NWD2Q9ULI1 1742 aa25.2■■□□□ 1.63
HOXA9-203ENST00000465941 PLCH1Q4KWH8 1693 aa25.2■■□□□ 1.62
HOXA9-203ENST00000465941 ZBTB7CA1YPR0 619 aa25.19■■□□□ 1.62
HOXA9-203ENST00000465941 ATRNO75882 1429 aa25.19■■□□□ 1.62
HOXA9-203ENST00000465941 VPS72Q15906 364 aa25.18■■□□□ 1.62
HOXA9-203ENST00000465941 LMO7Q8WWI1 1683 aa25.17■■□□□ 1.62
HOXA9-203ENST00000465941 CAMTA1Q9Y6Y1 1673 aa25.17■■□□□ 1.62
HOXA9-203ENST00000465941 AXIN2Q9Y2T1 843 aa25.17■■□□□ 1.62
HOXA9-203ENST00000465941 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
HOXA9-203ENST00000465941 FBLN1P23142 703 aa25.16■■□□□ 1.62
HOXA9-203ENST00000465941 RXRBP28702 533 aa25.16■■□□□ 1.62
HOXA9-203ENST00000465941 EVA1CP58658 441 aa25.15■■□□□ 1.62
HOXA9-203ENST00000465941 RBM6P78332 1123 aaKnown RBP25.15■■□□□ 1.62
HOXA9-203ENST00000465941 GJD4Q96KN9 370 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms