RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
CUEDC2-202ENST00000465409 USP6P35125 1406 aa18.33■□□□□ 0.53
CUEDC2-202ENST00000465409 TTC21AQ8NDW8 1320 aa18.33■□□□□ 0.53
CUEDC2-202ENST00000465409 LMOD2Q6P5Q4 547 aa18.33■□□□□ 0.52
CUEDC2-202ENST00000465409 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.52
CUEDC2-202ENST00000465409 ALS2Q96Q42 1657 aa18.33■□□□□ 0.52
CUEDC2-202ENST00000465409 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
CUEDC2-202ENST00000465409 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
CUEDC2-202ENST00000465409 FNBP4Q8N3X1 1017 aaPredicted RBP18.32■□□□□ 0.52
CUEDC2-202ENST00000465409 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
CUEDC2-202ENST00000465409 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
CUEDC2-202ENST00000465409 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
CUEDC2-202ENST00000465409 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
CUEDC2-202ENST00000465409 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
CUEDC2-202ENST00000465409 RGS17Q9UGC6 210 aaPredicted RBP18.3■□□□□ 0.52
CUEDC2-202ENST00000465409 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
CUEDC2-202ENST00000465409 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
CUEDC2-202ENST00000465409 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
CUEDC2-202ENST00000465409 TTC21BQ7Z4L5 1316 aa18.28■□□□□ 0.52
CUEDC2-202ENST00000465409 C8orf37Q96NL8 207 aa18.27■□□□□ 0.52
CUEDC2-202ENST00000465409 AKAP12Q02952 1782 aa18.27■□□□□ 0.51
CUEDC2-202ENST00000465409 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
CUEDC2-202ENST00000465409 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
CUEDC2-202ENST00000465409 USP19O94966 1318 aa18.25■□□□□ 0.51
CUEDC2-202ENST00000465409 AFF2P51816 1311 aa18.25■□□□□ 0.51
CUEDC2-202ENST00000465409 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
CUEDC2-202ENST00000465409 NLRP6P59044 892 aa18.25■□□□□ 0.51
CUEDC2-202ENST00000465409 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
CUEDC2-202ENST00000465409 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
CUEDC2-202ENST00000465409 USP31Q70CQ4 1352 aa18.23■□□□□ 0.51
CUEDC2-202ENST00000465409 GCP02774 474 aa18.23■□□□□ 0.51
CUEDC2-202ENST00000465409 KCNH5Q8NCM2 988 aa18.23■□□□□ 0.51
CUEDC2-202ENST00000465409 MARF1Q9Y4F3 1742 aaKnown RBP18.23■□□□□ 0.51
CUEDC2-202ENST00000465409 USP21Q9UK80 565 aa18.22■□□□□ 0.51
CUEDC2-202ENST00000465409 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
CUEDC2-202ENST00000465409 CPDO75976 1380 aa18.21■□□□□ 0.51
CUEDC2-202ENST00000465409 FAM83GA6ND36 823 aa18.21■□□□□ 0.51
CUEDC2-202ENST00000465409 POTEAQ6S8J7 498 aa18.21■□□□□ 0.51
CUEDC2-202ENST00000465409 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
CUEDC2-202ENST00000465409 TRPC5Q9UL62 973 aaPredicted RBP18.21■□□□□ 0.51
CUEDC2-202ENST00000465409 SLIT2O94813 1529 aa18.2■□□□□ 0.5
CUEDC2-202ENST00000465409 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
CUEDC2-202ENST00000465409 UNC5CLQ8IV45 518 aa18.2■□□□□ 0.5
CUEDC2-202ENST00000465409 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
CUEDC2-202ENST00000465409 ABCA3Q99758 1704 aa18.19■□□□□ 0.5
CUEDC2-202ENST00000465409 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
CUEDC2-202ENST00000465409 BCL9LQ86UU0 1499 aa18.19■□□□□ 0.5
CUEDC2-202ENST00000465409 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
CUEDC2-202ENST00000465409 RXRBP28702 533 aa18.18■□□□□ 0.5
CUEDC2-202ENST00000465409 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
CUEDC2-202ENST00000465409 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
CUEDC2-202ENST00000465409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
CUEDC2-202ENST00000465409 SLIT3O75094 1523 aa18.17■□□□□ 0.5
CUEDC2-202ENST00000465409 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 VPS72Q15906 364 aa18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 PHRF1Q9P1Y6 1649 aaKnown RBP18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 ATRNO75882 1429 aa18.15■□□□□ 0.5
CUEDC2-202ENST00000465409 CDK12Q9NYV4 1490 aaPredicted RBP18.14■□□□□ 0.5
CUEDC2-202ENST00000465409 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
CUEDC2-202ENST00000465409 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
CUEDC2-202ENST00000465409 BTG4Q9NY30 223 aa18.14■□□□□ 0.49
CUEDC2-202ENST00000465409 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
CUEDC2-202ENST00000465409 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
CUEDC2-202ENST00000465409 FYB1O15117 783 aa18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 ARHGEF25Q86VW2 580 aa18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 NME9Q86XW9 330 aa18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 GJD4Q96KN9 370 aaPredicted RBP18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
CUEDC2-202ENST00000465409 COG3Q96JB2 828 aa18.12■□□□□ 0.49
CUEDC2-202ENST00000465409 MYOM1P52179 1685 aa18.1■□□□□ 0.49
CUEDC2-202ENST00000465409 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
CUEDC2-202ENST00000465409 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
CUEDC2-202ENST00000465409 CGNL1Q0VF96 1302 aa18.1■□□□□ 0.49
CUEDC2-202ENST00000465409 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
CUEDC2-202ENST00000465409 ONECUT3O60422 494 aaPredicted RBP18.09■□□□□ 0.49
CUEDC2-202ENST00000465409 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
CUEDC2-202ENST00000465409 EVA1CP58658 441 aa18.08■□□□□ 0.48
CUEDC2-202ENST00000465409 PANK3Q9H999 370 aa18.08■□□□□ 0.48
CUEDC2-202ENST00000465409 ABCC6O95255 1503 aa18.08■□□□□ 0.48
CUEDC2-202ENST00000465409 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
CUEDC2-202ENST00000465409 CHRNA2Q15822 529 aa18.07■□□□□ 0.48
CUEDC2-202ENST00000465409 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
CUEDC2-202ENST00000465409 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
CUEDC2-202ENST00000465409 NFAT5O94916 1531 aa18.06■□□□□ 0.48
CUEDC2-202ENST00000465409 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
CUEDC2-202ENST00000465409 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
CUEDC2-202ENST00000465409 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 NSD2O96028 1365 aa18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 KIF24Q5T7B8 1368 aa18.04■□□□□ 0.48
CUEDC2-202ENST00000465409 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
CUEDC2-202ENST00000465409 GGNBP2Q9H3C7 697 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms