RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
ATPAF2-203ENST00000465337 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
ATPAF2-203ENST00000465337 SSH2Q76I76 1423 aa18.38■□□□□ 0.53
ATPAF2-203ENST00000465337 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
ATPAF2-203ENST00000465337 DDX17Q92841 729 aaKnown RBP18.37■□□□□ 0.53
ATPAF2-203ENST00000465337 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
ATPAF2-203ENST00000465337 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
ATPAF2-203ENST00000465337 CD163L1Q9NR16 1453 aa18.36■□□□□ 0.53
ATPAF2-203ENST00000465337 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
ATPAF2-203ENST00000465337 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
ATPAF2-203ENST00000465337 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
ATPAF2-203ENST00000465337 USP31Q70CQ4 1352 aa18.33■□□□□ 0.53
ATPAF2-203ENST00000465337 RGPD8O14715 1765 aaPredicted RBP18.33■□□□□ 0.53
ATPAF2-203ENST00000465337 PHLPP1O60346 1717 aa18.33■□□□□ 0.52
ATPAF2-203ENST00000465337 NLRP6P59044 892 aa18.33■□□□□ 0.52
ATPAF2-203ENST00000465337 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
ATPAF2-203ENST00000465337 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
ATPAF2-203ENST00000465337 NSD2O96028 1365 aa18.31■□□□□ 0.52
ATPAF2-203ENST00000465337 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
ATPAF2-203ENST00000465337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATPAF2-203ENST00000465337 PER1O15534 1290 aaPredicted RBP18.3■□□□□ 0.52
ATPAF2-203ENST00000465337 COG3Q96JB2 828 aa18.3■□□□□ 0.52
ATPAF2-203ENST00000465337 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
ATPAF2-203ENST00000465337 FYB1O15117 783 aa18.29■□□□□ 0.52
ATPAF2-203ENST00000465337 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
ATPAF2-203ENST00000465337 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
ATPAF2-203ENST00000465337 USP19O94966 1318 aa18.27■□□□□ 0.52
ATPAF2-203ENST00000465337 GCP02774 474 aa18.26■□□□□ 0.51
ATPAF2-203ENST00000465337 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
ATPAF2-203ENST00000465337 NME9Q86XW9 330 aa18.25■□□□□ 0.51
ATPAF2-203ENST00000465337 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
ATPAF2-203ENST00000465337 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
ATPAF2-203ENST00000465337 MYOM1P52179 1685 aa18.23■□□□□ 0.51
ATPAF2-203ENST00000465337 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
ATPAF2-203ENST00000465337 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
ATPAF2-203ENST00000465337 AMER1Q5JTC6 1135 aaPredicted RBP18.23■□□□□ 0.51
ATPAF2-203ENST00000465337 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
ATPAF2-203ENST00000465337 MED1Q15648 1581 aaPredicted RBP18.22■□□□□ 0.51
ATPAF2-203ENST00000465337 CPDO75976 1380 aa18.22■□□□□ 0.51
ATPAF2-203ENST00000465337 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
ATPAF2-203ENST00000465337 ALS2Q96Q42 1657 aa18.21■□□□□ 0.51
ATPAF2-203ENST00000465337 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
ATPAF2-203ENST00000465337 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
ATPAF2-203ENST00000465337 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
ATPAF2-203ENST00000465337 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
ATPAF2-203ENST00000465337 NRKQ7Z2Y5 1582 aa18.2■□□□□ 0.5
ATPAF2-203ENST00000465337 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
ATPAF2-203ENST00000465337 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
ATPAF2-203ENST00000465337 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
ATPAF2-203ENST00000465337 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
ATPAF2-203ENST00000465337 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
ATPAF2-203ENST00000465337 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
ATPAF2-203ENST00000465337 CABLES1Q8TDN4 633 aa18.18■□□□□ 0.5
ATPAF2-203ENST00000465337 ARHGEF25Q86VW2 580 aa18.17■□□□□ 0.5
ATPAF2-203ENST00000465337 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
ATPAF2-203ENST00000465337 RALBP1Q15311 655 aa18.16■□□□□ 0.5
ATPAF2-203ENST00000465337 NGLY1Q96IV0 654 aa18.16■□□□□ 0.5
ATPAF2-203ENST00000465337 SLIT3O75094 1523 aa18.16■□□□□ 0.5
ATPAF2-203ENST00000465337 FNBP4Q8N3X1 1017 aaPredicted RBP18.15■□□□□ 0.5
ATPAF2-203ENST00000465337 ADAMTS2O95450 1211 aa18.14■□□□□ 0.49
ATPAF2-203ENST00000465337 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
ATPAF2-203ENST00000465337 PIK3C2AO00443 1686 aa18.13■□□□□ 0.49
ATPAF2-203ENST00000465337 USP54Q70EL1 1684 aa18.13■□□□□ 0.49
ATPAF2-203ENST00000465337 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
ATPAF2-203ENST00000465337 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
ATPAF2-203ENST00000465337 ZNF772Q68DY9 489 aaPredicted RBP18.13■□□□□ 0.49
ATPAF2-203ENST00000465337 KIAA0232Q92628 1395 aa18.12■□□□□ 0.49
ATPAF2-203ENST00000465337 AMPHP49418 695 aa18.11■□□□□ 0.49
ATPAF2-203ENST00000465337 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
ATPAF2-203ENST00000465337 IP6K1Q92551 441 aa18.11■□□□□ 0.49
ATPAF2-203ENST00000465337 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
ATPAF2-203ENST00000465337 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
ATPAF2-203ENST00000465337 ABCC6O95255 1503 aa18.1■□□□□ 0.49
ATPAF2-203ENST00000465337 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
ATPAF2-203ENST00000465337 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
ATPAF2-203ENST00000465337 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
ATPAF2-203ENST00000465337 SOX12O15370 315 aa18.08■□□□□ 0.48
ATPAF2-203ENST00000465337 EVA1CP58658 441 aa18.08■□□□□ 0.48
ATPAF2-203ENST00000465337 POLKQ9UBT6 870 aa18.08■□□□□ 0.48
ATPAF2-203ENST00000465337 BLMP54132 1417 aaPredicted RBP18.07■□□□□ 0.48
ATPAF2-203ENST00000465337 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
ATPAF2-203ENST00000465337 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
ATPAF2-203ENST00000465337 USP21Q9UK80 565 aa18.07■□□□□ 0.48
ATPAF2-203ENST00000465337 LRP6O75581 1613 aa18.07■□□□□ 0.48
ATPAF2-203ENST00000465337 NFAT5O94916 1531 aa18.07■□□□□ 0.48
ATPAF2-203ENST00000465337 FLT4P35916 1363 aa18.06■□□□□ 0.48
ATPAF2-203ENST00000465337 TRPC5Q9UL62 973 aaPredicted RBP18.06■□□□□ 0.48
ATPAF2-203ENST00000465337 SLIT2O94813 1529 aa18.06■□□□□ 0.48
ATPAF2-203ENST00000465337 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
ATPAF2-203ENST00000465337 ANP32CO43423 234 aa18.05■□□□□ 0.48
ATPAF2-203ENST00000465337 HOXC9P31274 260 aa18.05■□□□□ 0.48
ATPAF2-203ENST00000465337 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
ATPAF2-203ENST00000465337 INSRP06213 1382 aa18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 AFF2P51816 1311 aa18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
ATPAF2-203ENST00000465337 VPS72Q15906 364 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms