RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	TNS3	Q68CZ2	1445 aa		33.74	■■■□□ 2.99
RERE-208	ENST00000465125	EDC4	Q6P2E9	1401 aa	Known RBP	33.74	■■■□□ 2.99
RERE-208	ENST00000465125	PAK3	O75914	559 aa	Predicted RBP	33.73	■■■□□ 2.99
RERE-208	ENST00000465125	LRRC59	Q96AG4	307 aa	Known RBP	33.72	■■■□□ 2.99
RERE-208	ENST00000465125	SSH2	Q76I76	1423 aa		33.71	■■■□□ 2.99
RERE-208	ENST00000465125	PANK3	Q9H999	370 aa		33.71	■■■□□ 2.99
RERE-208	ENST00000465125	SPATA31A3	Q5VYP0	1347 aa		33.7	■■■□□ 2.99
RERE-208	ENST00000465125	TTC21B	Q7Z4L5	1316 aa		33.69	■■■□□ 2.98
RERE-208	ENST00000465125	ALS2	Q96Q42	1657 aa		33.68	■■■□□ 2.98
RERE-208	ENST00000465125	NSD3	Q9BZ95	1437 aa		33.68	■■■□□ 2.98
RERE-208	ENST00000465125	TTC21A	Q8NDW8	1320 aa		33.67	■■■□□ 2.98
RERE-208	ENST00000465125	ARHGEF10	O15013	1369 aa		33.66	■■■□□ 2.98
RERE-208	ENST00000465125	LMOD2	Q6P5Q4	547 aa		33.66	■■■□□ 2.98
RERE-208	ENST00000465125	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.65	■■■□□ 2.98	3e-7	■□□□□ 11.1
RERE-208	ENST00000465125	CARD14	Q9BXL6	1004 aa		33.65	■■■□□ 2.98
RERE-208	ENST00000465125	JCAD	Q9P266	1359 aa		33.62	■■■□□ 2.97
RERE-208	ENST00000465125	PIK3C2A	O00443	1686 aa		33.62	■■■□□ 2.97
RERE-208	ENST00000465125	SHPRH	Q149N8	1683 aa		33.62	■■■□□ 2.97
RERE-208	ENST00000465125	PNPLA6	Q8IY17	1366 aa		33.61	■■■□□ 2.97
RERE-208	ENST00000465125	ABTB2	Q8N961	1025 aa		33.61	■■■□□ 2.97
RERE-208	ENST00000465125	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.58	■■■□□ 2.97
RERE-208	ENST00000465125	KIF20B	Q96Q89	1820 aa		33.58	■■■□□ 2.97
RERE-208	ENST00000465125	NME9	Q86XW9	330 aa		33.57	■■■□□ 2.96
RERE-208	ENST00000465125	CGNL1	Q0VF96	1302 aa		33.56	■■■□□ 2.96
RERE-208	ENST00000465125	DDX10	Q13206	875 aa	Known RBP	33.56	■■■□□ 2.96
RERE-208	ENST00000465125	NUTM2G	Q5VZR2	741 aa		33.56	■■■□□ 2.96
RERE-208	ENST00000465125	KNSTRN	Q9Y448	316 aa		33.56	■■■□□ 2.96
RERE-208	ENST00000465125	MED1	Q15648	1581 aa	Predicted RBP	33.55	■■■□□ 2.96
RERE-208	ENST00000465125	ILDR1	Q86SU0	546 aa	Predicted RBP	33.55	■■■□□ 2.96
RERE-208	ENST00000465125	NLRP6	P59044	892 aa		33.53	■■■□□ 2.96
RERE-208	ENST00000465125	NLRP13	Q86W25	1043 aa		33.53	■■■□□ 2.96
RERE-208	ENST00000465125	USP54	Q70EL1	1684 aa		33.52	■■■□□ 2.96
RERE-208	ENST00000465125	USP31	Q70CQ4	1352 aa		33.51	■■■□□ 2.96
RERE-208	ENST00000465125	PLEKHG5	O94827	1062 aa		33.5	■■■□□ 2.95
RERE-208	ENST00000465125	FYB1	O15117	783 aa		33.49	■■■□□ 2.95
RERE-208	ENST00000465125	PER1	O15534	1290 aa	Predicted RBP	33.49	■■■□□ 2.95
RERE-208	ENST00000465125	ZRANB1	Q9UGI0	708 aa		33.49	■■■□□ 2.95
RERE-208	ENST00000465125	ABCA3	Q99758	1704 aa		33.48	■■■□□ 2.95
RERE-208	ENST00000465125	MARF1	Q9Y4F3	1742 aa	Known RBP	33.48	■■■□□ 2.95
RERE-208	ENST00000465125	CRYBG1	Q9Y4K1	1723 aa		33.48	■■■□□ 2.95
RERE-208	ENST00000465125	OVOS2	A0A0J9YW53	1432 aa		33.48	■■■□□ 2.95
RERE-208	ENST00000465125	OVOS2	Q6IE36	1432 aa		33.48	■■■□□ 2.95
RERE-208	ENST00000465125	USP19	O94966	1318 aa		33.48	■■■□□ 2.95
RERE-208	ENST00000465125	NSD2	O96028	1365 aa		33.47	■■■□□ 2.95
RERE-208	ENST00000465125	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.47	■■■□□ 2.95
RERE-208	ENST00000465125	COG3	Q96JB2	828 aa		33.47	■■■□□ 2.95
RERE-208	ENST00000465125	GGNBP2	Q9H3C7	697 aa		33.47	■■■□□ 2.95
RERE-208	ENST00000465125	SPATA31A6	Q5VVP1	1343 aa		33.47	■■■□□ 2.95
RERE-208	ENST00000465125	HAP1	P54257	671 aa	Predicted RBP	33.45	■■■□□ 2.95
RERE-208	ENST00000465125	CABLES1	Q8TDN4	633 aa		33.45	■■■□□ 2.95
RERE-208	ENST00000465125	ANKRD26	Q9UPS8	1709 aa		33.45	■■■□□ 2.94
RERE-208	ENST00000465125	SLIT3	O75094	1523 aa		33.44	■■■□□ 2.94
RERE-208	ENST00000465125	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.43	■■■□□ 2.94
RERE-208	ENST00000465125	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.41	■■■□□ 2.94
RERE-208	ENST00000465125	NUTM2E	B1AL46	878 aa	Predicted RBP	33.41	■■■□□ 2.94
RERE-208	ENST00000465125	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.41	■■■□□ 2.94
RERE-208	ENST00000465125	NPC1L1	Q9UHC9	1359 aa		33.4	■■■□□ 2.94
RERE-208	ENST00000465125	KCNH5	Q8NCM2	988 aa		33.37	■■■□□ 2.93
RERE-208	ENST00000465125	LRP6	O75581	1613 aa		33.36	■■■□□ 2.93
RERE-208	ENST00000465125	GC	P02774	474 aa		33.36	■■■□□ 2.93
RERE-208	ENST00000465125	CC2D1B	Q5T0F9	858 aa	Known RBP	33.36	■■■□□ 2.93
RERE-208	ENST00000465125	SOX12	O15370	315 aa		33.35	■■■□□ 2.93
RERE-208	ENST00000465125	NFAT5	O94916	1531 aa		33.34	■■■□□ 2.93
RERE-208	ENST00000465125	CNGB1	Q14028	1251 aa	Predicted RBP	33.33	■■■□□ 2.93
RERE-208	ENST00000465125	MORC1	Q86VD1	984 aa		33.33	■■■□□ 2.93
RERE-208	ENST00000465125	ADAMTS2	O95450	1211 aa		33.31	■■■□□ 2.92
RERE-208	ENST00000465125	ZC3H6	P61129	1189 aa	Known RBP	33.28	■■■□□ 2.92
RERE-208	ENST00000465125	MEX3C	Q5U5Q3	659 aa	Known RBP	33.28	■■■□□ 2.92
RERE-208	ENST00000465125	CPD	O75976	1380 aa		33.27	■■■□□ 2.92
RERE-208	ENST00000465125	KIAA0232	Q92628	1395 aa		33.27	■■■□□ 2.92
RERE-208	ENST00000465125	ZBTB7C	A1YPR0	619 aa		33.25	■■■□□ 2.91
RERE-208	ENST00000465125	TNNT2	P45379	298 aa	Predicted RBP	33.25	■■■□□ 2.91
RERE-208	ENST00000465125	PRDM11	Q9NQV5	511 aa		33.25	■■■□□ 2.91
RERE-208	ENST00000465125	LTN1	O94822	1766 aa		33.24	■■■□□ 2.91
RERE-208	ENST00000465125	AATK	Q6ZMQ8	1374 aa		33.22	■■■□□ 2.91
RERE-208	ENST00000465125	COL14A1	Q05707	1796 aa	Known RBP	33.22	■■■□□ 2.91
RERE-208	ENST00000465125	ARHGEF25	Q86VW2	580 aa		33.22	■■■□□ 2.91
RERE-208	ENST00000465125	FBLN1	P23142	703 aa		33.2	■■■□□ 2.91
RERE-208	ENST00000465125	C8orf37	Q96NL8	207 aa		33.2	■■■□□ 2.91
RERE-208	ENST00000465125	RRS1	Q15050	365 aa	Known RBP	33.18	■■■□□ 2.9
RERE-208	ENST00000465125	CHRNA2	Q15822	529 aa		33.18	■■■□□ 2.9
RERE-208	ENST00000465125	MAP3K19	Q56UN5	1328 aa		33.18	■■■□□ 2.9
RERE-208	ENST00000465125	PARD3	Q8TEW0	1356 aa		33.18	■■■□□ 2.9
RERE-208	ENST00000465125	ABCC6	O95255	1503 aa		33.18	■■■□□ 2.9
RERE-208	ENST00000465125	PLCH1	Q4KWH8	1693 aa		33.17	■■■□□ 2.9
RERE-208	ENST00000465125	FAM83G	A6ND36	823 aa		33.17	■■■□□ 2.9
RERE-208	ENST00000465125	NGLY1	Q96IV0	654 aa		33.16	■■■□□ 2.9
RERE-208	ENST00000465125	RTL1	A6NKG5	1358 aa		33.15	■■■□□ 2.9
RERE-208	ENST00000465125	MAP2	P11137	1827 aa	Known RBP	33.15	■■■□□ 2.9
RERE-208	ENST00000465125	LMO7	Q8WWI1	1683 aa		33.14	■■■□□ 2.9
RERE-208	ENST00000465125	AMPH	P49418	695 aa		33.14	■■■□□ 2.9
RERE-208	ENST00000465125	RALBP1	Q15311	655 aa		33.13	■■■□□ 2.89
RERE-208	ENST00000465125	EMILIN1	Q9Y6C2	1016 aa		33.13	■■■□□ 2.89
RERE-208	ENST00000465125	COL18A1	P39060	1754 aa		33.13	■■■□□ 2.89
RERE-208	ENST00000465125	POLK	Q9UBT6	870 aa		33.12	■■■□□ 2.89
RERE-208	ENST00000465125	SMG6	Q86US8	1419 aa	Known RBP	33.11	■■■□□ 2.89
RERE-208	ENST00000465125	PEAK1	Q9H792	1746 aa		33.11	■■■□□ 2.89
RERE-208	ENST00000465125	KIF24	Q5T7B8	1368 aa		33.11	■■■□□ 2.89
RERE-208	ENST00000465125	SLIT2	O94813	1529 aa		33.11	■■■□□ 2.89
RERE-208	ENST00000465125	NWD2	Q9ULI1	1742 aa		33.11	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms