RNA–Protein interactions for RNA: ENST00000464167.5

RPL35A-206, Transcript of ribosomal protein L35a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35A, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-206ENST00000464167 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
RPL35A-206ENST00000464167 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
RPL35A-206ENST00000464167 BRINP3Q76B58 766 aa17.32■□□□□ 0.36
RPL35A-206ENST00000464167 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
RPL35A-206ENST00000464167 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
RPL35A-206ENST00000464167 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
RPL35A-206ENST00000464167 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
RPL35A-206ENST00000464167 POLR3AO14802 1390 aaPredicted RBP17.31■□□□□ 0.36
RPL35A-206ENST00000464167 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
RPL35A-206ENST00000464167 ACEP12821 1306 aa17.3■□□□□ 0.36
RPL35A-206ENST00000464167 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
RPL35A-206ENST00000464167 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
RPL35A-206ENST00000464167 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
RPL35A-206ENST00000464167 PIP4K2BP78356 416 aa17.29■□□□□ 0.36
RPL35A-206ENST00000464167 MYOM1P52179 1685 aa17.29■□□□□ 0.36
RPL35A-206ENST00000464167 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
RPL35A-206ENST00000464167 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
RPL35A-206ENST00000464167 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.36
RPL35A-206ENST00000464167 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
RPL35A-206ENST00000464167 FOXO3O43524 673 aa17.27■□□□□ 0.35
RPL35A-206ENST00000464167 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.35
RPL35A-206ENST00000464167 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
RPL35A-206ENST00000464167 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
RPL35A-206ENST00000464167 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
RPL35A-206ENST00000464167 PSME1Q06323 249 aa17.25■□□□□ 0.35
RPL35A-206ENST00000464167 PANK3Q9H999 370 aa17.25■□□□□ 0.35
RPL35A-206ENST00000464167 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
RPL35A-206ENST00000464167 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
RPL35A-206ENST00000464167 USP6P35125 1406 aa17.23■□□□□ 0.35
RPL35A-206ENST00000464167 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
RPL35A-206ENST00000464167 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
RPL35A-206ENST00000464167 SPDYE1Q8NFV5 336 aaPredicted RBP17.22■□□□□ 0.35
RPL35A-206ENST00000464167 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
RPL35A-206ENST00000464167 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
RPL35A-206ENST00000464167 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
RPL35A-206ENST00000464167 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
RPL35A-206ENST00000464167 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
RPL35A-206ENST00000464167 PXDNQ92626 1479 aa17.21■□□□□ 0.35
RPL35A-206ENST00000464167 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
RPL35A-206ENST00000464167 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.34
RPL35A-206ENST00000464167 AKAP12Q02952 1782 aa17.21■□□□□ 0.34
RPL35A-206ENST00000464167 EDC4Q6P2E9 1401 aaKnown RBP17.2■□□□□ 0.34
RPL35A-206ENST00000464167 SSH2Q76I76 1423 aa17.2■□□□□ 0.34
RPL35A-206ENST00000464167 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
RPL35A-206ENST00000464167 MON2Q7Z3U7 1717 aa17.19■□□□□ 0.34
RPL35A-206ENST00000464167 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
RPL35A-206ENST00000464167 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
RPL35A-206ENST00000464167 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
RPL35A-206ENST00000464167 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
RPL35A-206ENST00000464167 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
RPL35A-206ENST00000464167 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
RPL35A-206ENST00000464167 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
RPL35A-206ENST00000464167 NRKQ7Z2Y5 1582 aa17.17■□□□□ 0.34
RPL35A-206ENST00000464167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPL35A-206ENST00000464167 FBXO41Q8TF61 875 aa17.16■□□□□ 0.34
RPL35A-206ENST00000464167 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
RPL35A-206ENST00000464167 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
RPL35A-206ENST00000464167 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
RPL35A-206ENST00000464167 LRRC59Q96AG4 307 aaKnown RBP17.14■□□□□ 0.33
RPL35A-206ENST00000464167 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
RPL35A-206ENST00000464167 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
RPL35A-206ENST00000464167 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
RPL35A-206ENST00000464167 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
RPL35A-206ENST00000464167 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
RPL35A-206ENST00000464167 FYB1O15117 783 aa17.12■□□□□ 0.33
RPL35A-206ENST00000464167 HSPA1LP34931 641 aa17.12■□□□□ 0.33
RPL35A-206ENST00000464167 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
RPL35A-206ENST00000464167 NME9Q86XW9 330 aa17.12■□□□□ 0.33
RPL35A-206ENST00000464167 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
RPL35A-206ENST00000464167 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
RPL35A-206ENST00000464167 NSD2O96028 1365 aa17.1■□□□□ 0.33
RPL35A-206ENST00000464167 USP31Q70CQ4 1352 aa17.1■□□□□ 0.33
RPL35A-206ENST00000464167 NPC1L1Q9UHC9 1359 aa17.1■□□□□ 0.33
RPL35A-206ENST00000464167 NLRP6P59044 892 aa17.09■□□□□ 0.33
RPL35A-206ENST00000464167 PIK3C2AO00443 1686 aa17.09■□□□□ 0.33
RPL35A-206ENST00000464167 NUTM2GQ5VZR2 741 aa17.08■□□□□ 0.32
RPL35A-206ENST00000464167 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
RPL35A-206ENST00000464167 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
RPL35A-206ENST00000464167 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
RPL35A-206ENST00000464167 COG3Q96JB2 828 aa17.07■□□□□ 0.32
RPL35A-206ENST00000464167 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
RPL35A-206ENST00000464167 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
RPL35A-206ENST00000464167 PNPLA6Q8IY17 1366 aa17.07■□□□□ 0.32
RPL35A-206ENST00000464167 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
RPL35A-206ENST00000464167 JCADQ9P266 1359 aa17.06■□□□□ 0.32
RPL35A-206ENST00000464167 USP19O94966 1318 aa17.06■□□□□ 0.32
RPL35A-206ENST00000464167 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
RPL35A-206ENST00000464167 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
RPL35A-206ENST00000464167 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
RPL35A-206ENST00000464167 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
RPL35A-206ENST00000464167 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
RPL35A-206ENST00000464167 SLIT3O75094 1523 aa17.02■□□□□ 0.31
RPL35A-206ENST00000464167 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.31
RPL35A-206ENST00000464167 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.31
RPL35A-206ENST00000464167 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.31
RPL35A-206ENST00000464167 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
RPL35A-206ENST00000464167 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
RPL35A-206ENST00000464167 GCP02774 474 aa17.01■□□□□ 0.31
RPL35A-206ENST00000464167 ANKRD26Q9UPS8 1709 aa17■□□□□ 0.31
RPL35A-206ENST00000464167 MARF1Q9Y4F3 1742 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms