RNA–Protein interactions for RNA: ENST00000463784.5

IRF1-207, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-207ENST00000463784 ILDR2Q71H61 639 aa28.57■■■□□ 2.16
IRF1-207ENST00000463784 TMC1Q8TDI8 760 aa28.57■■■□□ 2.16
IRF1-207ENST00000463784 CABLES1Q8TDN4 633 aa28.57■■■□□ 2.16
IRF1-207ENST00000463784 AFF2P51816 1311 aa28.57■■■□□ 2.16
IRF1-207ENST00000463784 CDCA8Q53HL2 280 aa28.56■■■□□ 2.16
IRF1-207ENST00000463784 TRPM3Q9HCF6 1732 aaPredicted RBP28.56■■■□□ 2.16
IRF1-207ENST00000463784 ABTB2Q8N961 1025 aa28.55■■■□□ 2.16
IRF1-207ENST00000463784 EIF4G2P78344 907 aaKnown RBP eCLIP28.54■■■□□ 2.16
IRF1-207ENST00000463784 USP6P35125 1406 aa28.53■■■□□ 2.16
IRF1-207ENST00000463784 POTEAQ6S8J7 498 aa28.53■■■□□ 2.16
IRF1-207ENST00000463784 HDGFL2Q7Z4V5 671 aaPredicted RBP28.52■■■□□ 2.16
IRF1-207ENST00000463784 FNBP4Q8N3X1 1017 aaPredicted RBP28.51■■■□□ 2.15
IRF1-207ENST00000463784 TERF2IPQ9NYB0 399 aa28.51■■■□□ 2.15
IRF1-207ENST00000463784 ALS2Q96Q42 1657 aa28.51■■■□□ 2.15
IRF1-207ENST00000463784 NLRP13Q86W25 1043 aa28.5■■■□□ 2.15
IRF1-207ENST00000463784 SLC12A5Q9H2X9 1139 aa28.5■■■□□ 2.15
IRF1-207ENST00000463784 USP21Q9UK80 565 aa28.5■■■□□ 2.15
IRF1-207ENST00000463784 NINLQ9Y2I6 1382 aa28.5■■■□□ 2.15
IRF1-207ENST00000463784 NUTM2GQ5VZR2 741 aa28.49■■■□□ 2.15
IRF1-207ENST00000463784 KTN1Q86UP2 1357 aaKnown RBP28.49■■■□□ 2.15
IRF1-207ENST00000463784 CPSF1Q10570 1443 aaKnown RBP28.48■■■□□ 2.15
IRF1-207ENST00000463784 QTRT2Q9H974 415 aaKnown RBP28.46■■■□□ 2.15
IRF1-207ENST00000463784 TTC21BQ7Z4L5 1316 aa28.45■■■□□ 2.15
IRF1-207ENST00000463784 TTC21AQ8NDW8 1320 aa28.45■■■□□ 2.15
IRF1-207ENST00000463784 HSPA5P11021 654 aaKnown RBP28.44■■■□□ 2.14
IRF1-207ENST00000463784 RXRBP28702 533 aa28.44■■■□□ 2.14
IRF1-207ENST00000463784 NLRP6P59044 892 aa28.44■■■□□ 2.14
IRF1-207ENST00000463784 SSH2Q76I76 1423 aa28.43■■■□□ 2.14
IRF1-207ENST00000463784 TRPC5Q9UL62 973 aaPredicted RBP28.43■■■□□ 2.14
IRF1-207ENST00000463784 FAM83GA6ND36 823 aa28.4■■■□□ 2.14
IRF1-207ENST00000463784 RBM6P78332 1123 aaKnown RBP28.39■■■□□ 2.14
IRF1-207ENST00000463784 UNC5CLQ8IV45 518 aa28.39■■■□□ 2.14
IRF1-207ENST00000463784 PRDM11Q9NQV5 511 aa28.39■■■□□ 2.14
IRF1-207ENST00000463784 MARF1Q9Y4F3 1742 aaKnown RBP28.39■■■□□ 2.14
IRF1-207ENST00000463784 USP19O94966 1318 aa28.39■■■□□ 2.13
IRF1-207ENST00000463784 GCP02774 474 aa28.37■■■□□ 2.13
IRF1-207ENST00000463784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.37■■■□□ 2.13
IRF1-207ENST00000463784 CD163L1Q9NR16 1453 aa28.37■■■□□ 2.13
IRF1-207ENST00000463784 SLIT2O94813 1529 aa28.37■■■□□ 2.13
IRF1-207ENST00000463784 AKAP12Q02952 1782 aa28.37■■■□□ 2.13
IRF1-207ENST00000463784 A0A1W2PP64 1363 aa28.37■■■□□ 2.13
IRF1-207ENST00000463784 BCL9LQ86UU0 1499 aa28.36■■■□□ 2.13
IRF1-207ENST00000463784 ABCA3Q99758 1704 aa28.36■■■□□ 2.13
IRF1-207ENST00000463784 ZC3H6P61129 1189 aaKnown RBP28.36■■■□□ 2.13
IRF1-207ENST00000463784 EDC4Q6P2E9 1401 aaKnown RBP28.35■■■□□ 2.13
IRF1-207ENST00000463784 ANKRD36BQ8N2N9 1353 aa28.34■■■□□ 2.13
IRF1-207ENST00000463784 KIAA0232Q92628 1395 aa28.34■■■□□ 2.13
IRF1-207ENST00000463784 KCNH5Q8NCM2 988 aa28.33■■■□□ 2.13
IRF1-207ENST00000463784 BTG4Q9NY30 223 aa28.33■■■□□ 2.13
IRF1-207ENST00000463784 ATRNO75882 1429 aa28.32■■■□□ 2.12
IRF1-207ENST00000463784 SOCS7O14512 581 aa28.31■■■□□ 2.12
IRF1-207ENST00000463784 POLR3GLQ9BT43 218 aa28.31■■■□□ 2.12
IRF1-207ENST00000463784 MON2Q7Z3U7 1717 aa28.3■■■□□ 2.12
IRF1-207ENST00000463784 CRYBG1Q9Y4K1 1723 aa28.3■■■□□ 2.12
IRF1-207ENST00000463784 GJD4Q96KN9 370 aaPredicted RBP28.3■■■□□ 2.12
IRF1-207ENST00000463784 PHRF1Q9P1Y6 1649 aaKnown RBP28.29■■■□□ 2.12
IRF1-207ENST00000463784 CPDO75976 1380 aa28.29■■■□□ 2.12
IRF1-207ENST00000463784 USP31Q70CQ4 1352 aa28.28■■■□□ 2.12
IRF1-207ENST00000463784 CHRNA2Q15822 529 aa28.28■■■□□ 2.12
IRF1-207ENST00000463784 VPS72Q15906 364 aa28.28■■■□□ 2.12
IRF1-207ENST00000463784 NME9Q86XW9 330 aa28.28■■■□□ 2.12
IRF1-207ENST00000463784 CCDC9Q9Y3X0 531 aaKnown RBP28.28■■■□□ 2.12
IRF1-207ENST00000463784 NRKQ7Z2Y5 1582 aa28.28■■■□□ 2.12
IRF1-207ENST00000463784 COL14A1Q05707 1796 aaKnown RBP28.27■■■□□ 2.12
IRF1-207ENST00000463784 CDK12Q9NYV4 1490 aaPredicted RBP28.27■■■□□ 2.12
IRF1-207ENST00000463784 PIK3C2AO00443 1686 aa28.26■■■□□ 2.12
IRF1-207ENST00000463784 SLIT3O75094 1523 aa28.25■■■□□ 2.11
IRF1-207ENST00000463784 NWD2Q9ULI1 1742 aa28.24■■■□□ 2.11
IRF1-207ENST00000463784 ZBTB7CA1YPR0 619 aa28.24■■■□□ 2.11
IRF1-207ENST00000463784 EVA1CP58658 441 aa28.23■■■□□ 2.11
IRF1-207ENST00000463784 ZRANB1Q9UGI0 708 aa28.23■■■□□ 2.11
IRF1-207ENST00000463784 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.23■■■□□ 2.11
IRF1-207ENST00000463784 PLCH1Q4KWH8 1693 aa28.23■■■□□ 2.11
IRF1-207ENST00000463784 SOX12O15370 315 aa28.22■■■□□ 2.11
IRF1-207ENST00000463784 COG3Q96JB2 828 aa28.21■■■□□ 2.11
IRF1-207ENST00000463784 STRN4Q9NRL3 753 aa28.2■■■□□ 2.1
IRF1-207ENST00000463784 ARHGEF25Q86VW2 580 aa28.19■■■□□ 2.1
IRF1-207ENST00000463784 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
IRF1-207ENST00000463784 RGS12O14924 1447 aa28.16■■■□□ 2.1
IRF1-207ENST00000463784 C11orf95C9JLR9 678 aaPredicted RBP28.15■■■□□ 2.1
IRF1-207ENST00000463784 FYB1O15117 783 aa28.15■■■□□ 2.1
IRF1-207ENST00000463784 CARD14Q9BXL6 1004 aa28.15■■■□□ 2.1
IRF1-207ENST00000463784 OVOS2A0A0J9YW53 1432 aa28.14■■■□□ 2.1
IRF1-207ENST00000463784 OVOS2Q6IE36 1432 aa28.14■■■□□ 2.1
IRF1-207ENST00000463784 SPATA31A5Q5VU36 1347 aa28.14■■■□□ 2.09
IRF1-207ENST00000463784 SPATA31A7Q8IWB4 1347 aa28.14■■■□□ 2.09
IRF1-207ENST00000463784 GGNBP2Q9H3C7 697 aa28.12■■■□□ 2.09
IRF1-207ENST00000463784 CAMTA1Q9Y6Y1 1673 aa28.12■■■□□ 2.09
IRF1-207ENST00000463784 NRAPQ86VF7 1730 aa28.12■■■□□ 2.09
IRF1-207ENST00000463784 NSD3Q9BZ95 1437 aa28.11■■■□□ 2.09
IRF1-207ENST00000463784 MYOM1P52179 1685 aa28.11■■■□□ 2.09
IRF1-207ENST00000463784 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
IRF1-207ENST00000463784 USP54Q70EL1 1684 aa28.1■■■□□ 2.09
IRF1-207ENST00000463784 PANK3Q9H999 370 aa28.1■■■□□ 2.09
IRF1-207ENST00000463784 CGNL1Q0VF96 1302 aa28.1■■■□□ 2.09
IRF1-207ENST00000463784 NFAT5O94916 1531 aa28.09■■■□□ 2.09
IRF1-207ENST00000463784 GLI3P10071 1580 aa28.09■■■□□ 2.09
IRF1-207ENST00000463784 KIF7Q2M1P5 1343 aa28.09■■■□□ 2.09
IRF1-207ENST00000463784 SPATA31A1Q5TZJ5 1347 aa28.09■■■□□ 2.09
IRF1-207ENST00000463784 A0A0G2JS52 829 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms