RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
EPHA4-210ENST00000463446 PNNQ9H307 717 aaKnown RBP9.98□□□□□ -0.81
EPHA4-210ENST00000463446 PRKRIP1Q9H875 184 aaPredicted RBP9.98□□□□□ -0.81
EPHA4-210ENST00000463446 TTC21BQ7Z4L5 1316 aa9.98□□□□□ -0.81
EPHA4-210ENST00000463446 ITSN1Q15811 1721 aa9.98□□□□□ -0.81
EPHA4-210ENST00000463446 NLRP6P59044 892 aa9.97□□□□□ -0.81
EPHA4-210ENST00000463446 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-210ENST00000463446 BRINP3Q76B58 766 aa9.97□□□□□ -0.81
EPHA4-210ENST00000463446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.97□□□□□ -0.81
EPHA4-210ENST00000463446 A0A1W2PP64 1363 aa9.97□□□□□ -0.81
EPHA4-210ENST00000463446 SBNO1A3KN83 1393 aa9.97□□□□□ -0.81
EPHA4-210ENST00000463446 ARHGEF10O15013 1369 aa9.97□□□□□ -0.81
EPHA4-210ENST00000463446 MST1RQ04912 1400 aa9.97□□□□□ -0.81
EPHA4-210ENST00000463446 LTBP4Q8N2S1 1624 aa9.96□□□□□ -0.81
EPHA4-210ENST00000463446 CC2D1BQ5T0F9 858 aaKnown RBP9.96□□□□□ -0.82
EPHA4-210ENST00000463446 USP6P35125 1406 aa9.96□□□□□ -0.82
EPHA4-210ENST00000463446 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
EPHA4-210ENST00000463446 PPP4R3CPQ6ZMV5 832 aa9.95□□□□□ -0.82
EPHA4-210ENST00000463446 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
EPHA4-210ENST00000463446 MYBBP1AQ9BQG0 1328 aaKnown RBP9.95□□□□□ -0.82
EPHA4-210ENST00000463446 NSD3Q9BZ95 1437 aa9.95□□□□□ -0.82
EPHA4-210ENST00000463446 FMN2Q9NZ56 1722 aa9.95□□□□□ -0.82
EPHA4-210ENST00000463446 KIF1AQ12756 1690 aa9.94□□□□□ -0.82
EPHA4-210ENST00000463446 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
EPHA4-210ENST00000463446 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
EPHA4-210ENST00000463446 HOXD11P31277 338 aaPredicted RBP9.94□□□□□ -0.82
EPHA4-210ENST00000463446 HAP1P54257 671 aaPredicted RBP9.94□□□□□ -0.82
EPHA4-210ENST00000463446 KIF24Q5T7B8 1368 aa9.93□□□□□ -0.82
EPHA4-210ENST00000463446 GGNBP2Q9H3C7 697 aa9.93□□□□□ -0.82
EPHA4-210ENST00000463446 STRCP1A6NGW2 1772 aa9.93□□□□□ -0.82
EPHA4-210ENST00000463446 NALCNQ8IZF0 1738 aa9.93□□□□□ -0.82
EPHA4-210ENST00000463446 AATKQ6ZMQ8 1374 aa9.92□□□□□ -0.82
EPHA4-210ENST00000463446 SPATA31A3Q5VYP0 1347 aa9.92□□□□□ -0.82
EPHA4-210ENST00000463446 DCAF8L1A6NGE4 600 aa9.92□□□□□ -0.82
EPHA4-210ENST00000463446 NEFMP07197 916 aa9.92□□□□□ -0.82
EPHA4-210ENST00000463446 PIP4K2BP78356 416 aa9.92□□□□□ -0.82
EPHA4-210ENST00000463446 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
EPHA4-210ENST00000463446 SSH2Q76I76 1423 aa9.9□□□□□ -0.82
EPHA4-210ENST00000463446 PARD3Q8TEW0 1356 aa9.9□□□□□ -0.82
EPHA4-210ENST00000463446 GCP02774 474 aa9.9□□□□□ -0.82
EPHA4-210ENST00000463446 PPP2R1AP30153 589 aa9.9□□□□□ -0.82
EPHA4-210ENST00000463446 AMPHP49418 695 aa9.9□□□□□ -0.82
EPHA4-210ENST00000463446 NME9Q86XW9 330 aa9.9□□□□□ -0.82
EPHA4-210ENST00000463446 WDR43Q15061 677 aaKnown RBP eCLIP9.89□□□□□ -0.83
EPHA4-210ENST00000463446 MIER1Q8N108 512 aa9.89□□□□□ -0.83
EPHA4-210ENST00000463446 NGEFQ8N5V2 710 aa9.89□□□□□ -0.83
EPHA4-210ENST00000463446 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
EPHA4-210ENST00000463446 MTHFSP49914 203 aa9.88□□□□□ -0.83
EPHA4-210ENST00000463446 MRS2Q9HD23 443 aa9.88□□□□□ -0.83
EPHA4-210ENST00000463446 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
EPHA4-210ENST00000463446 PPM1GO15355 546 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-210ENST00000463446 DIAPH1O60610 1272 aaKnown RBP9.87□□□□□ -0.83
EPHA4-210ENST00000463446 TNNT2P45379 298 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-210ENST00000463446 CNGB1Q14028 1251 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-210ENST00000463446 TNS3Q68CZ2 1445 aa9.87□□□□□ -0.83
EPHA4-210ENST00000463446 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
EPHA4-210ENST00000463446 SPATA31A6Q5VVP1 1343 aa9.86□□□□□ -0.83
EPHA4-210ENST00000463446 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
EPHA4-210ENST00000463446 XPCQ01831 940 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-210ENST00000463446 IP6K1Q92551 441 aa9.86□□□□□ -0.83
EPHA4-210ENST00000463446 POLKQ9UBT6 870 aa9.86□□□□□ -0.83
EPHA4-210ENST00000463446 MYOM1P52179 1685 aa9.86□□□□□ -0.83
EPHA4-210ENST00000463446 INSRP06213 1382 aa9.86□□□□□ -0.83
EPHA4-210ENST00000463446 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
EPHA4-210ENST00000463446 RGPD8O14715 1765 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-210ENST00000463446 JCADQ9P266 1359 aa9.85□□□□□ -0.83
EPHA4-210ENST00000463446 USP19O94966 1318 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 FCHSD2O94868 740 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 EVA1CP58658 441 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 ARHGEF25Q86VW2 580 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 RTL1A6NKG5 1358 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 MON2Q7Z3U7 1717 aa9.84□□□□□ -0.83
EPHA4-210ENST00000463446 SMG6Q86US8 1419 aaKnown RBP9.83□□□□□ -0.84
EPHA4-210ENST00000463446 NCBP3Q53F19 620 aaKnown RBP9.83□□□□□ -0.84
EPHA4-210ENST00000463446 PRDM11Q9NQV5 511 aa9.83□□□□□ -0.84
EPHA4-210ENST00000463446 FLT4P35916 1363 aa9.83□□□□□ -0.84
EPHA4-210ENST00000463446 PXDNQ92626 1479 aa9.83□□□□□ -0.84
EPHA4-210ENST00000463446 OVOS2A0A0J9YW53 1432 aa9.82□□□□□ -0.84
EPHA4-210ENST00000463446 OVOS2Q6IE36 1432 aa9.82□□□□□ -0.84
EPHA4-210ENST00000463446 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
EPHA4-210ENST00000463446 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
EPHA4-210ENST00000463446 DDX17Q92841 729 aaKnown RBP9.82□□□□□ -0.84
EPHA4-210ENST00000463446 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
EPHA4-210ENST00000463446 CPDO75976 1380 aa9.82□□□□□ -0.84
EPHA4-210ENST00000463446 PNPLA6Q8IY17 1366 aa9.82□□□□□ -0.84
EPHA4-210ENST00000463446 HOXC9P31274 260 aa9.81□□□□□ -0.84
EPHA4-210ENST00000463446 BLMP54132 1417 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-210ENST00000463446 MAP3K19Q56UN5 1328 aa9.81□□□□□ -0.84
EPHA4-210ENST00000463446 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
EPHA4-210ENST00000463446 SOX12O15370 315 aa9.8□□□□□ -0.84
EPHA4-210ENST00000463446 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-210ENST00000463446 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
EPHA4-210ENST00000463446 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
EPHA4-210ENST00000463446 RRS1Q15050 365 aaKnown RBP9.8□□□□□ -0.84
EPHA4-210ENST00000463446 FAM9BQ8IZU0 186 aa9.8□□□□□ -0.84
EPHA4-210ENST00000463446 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
EPHA4-210ENST00000463446 U2SURPO15042 1029 aaKnown RBP9.79□□□□□ -0.84
EPHA4-210ENST00000463446 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms