RNA–Protein interactions for RNA: ENST00000463022.1

SP110-208, Transcript of SP110 nuclear body protein, human

TSL 2

Gene SP110, Length 405 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SP110-208	ENST00000463022	COL22A1	Q8NFW1	1626 aa	Predicted RBP	6.15	□□□□□ -1.42
SP110-208	ENST00000463022	FOXO3	O43524	673 aa		6.15	□□□□□ -1.42
SP110-208	ENST00000463022	PSME1	Q06323	249 aa		6.15	□□□□□ -1.42
SP110-208	ENST00000463022	PCGF6	Q9BYE7	350 aa		6.15	□□□□□ -1.42
SP110-208	ENST00000463022	SBNO1	A3KN83	1393 aa		6.15	□□□□□ -1.43
SP110-208	ENST00000463022	SBNO2	Q9Y2G9	1366 aa		6.15	□□□□□ -1.43
SP110-208	ENST00000463022	ATP7B	P35670	1465 aa		6.15	□□□□□ -1.43
SP110-208	ENST00000463022	LRP6	O75581	1613 aa		6.14	□□□□□ -1.43
SP110-208	ENST00000463022	ITSN1	Q15811	1721 aa		6.14	□□□□□ -1.43
SP110-208	ENST00000463022	NBPF8	Q3BBV2	869 aa		6.14	□□□□□ -1.43
SP110-208	ENST00000463022	DDX17	Q92841	729 aa	Known RBP	6.14	□□□□□ -1.43
SP110-208	ENST00000463022	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.14	□□□□□ -1.43
SP110-208	ENST00000463022	FARP1	Q9Y4F1	1045 aa	Predicted RBP	6.14	□□□□□ -1.43
SP110-208	ENST00000463022	SPATA31A3	Q5VYP0	1347 aa		6.14	□□□□□ -1.43
SP110-208	ENST00000463022	PRR36	Q9H6K5	1346 aa		6.14	□□□□□ -1.43
SP110-208	ENST00000463022	RGPD8	O14715	1765 aa	Predicted RBP	6.13	□□□□□ -1.43
SP110-208	ENST00000463022	PLEKHG3	A1L390	1219 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	NUTM2F	A1L443	756 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	SLC24A1	O60721	1099 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	MEX3C	Q5U5Q3	659 aa	Known RBP	6.13	□□□□□ -1.43
SP110-208	ENST00000463022	ZNF772	Q68DY9	489 aa	Predicted RBP	6.13	□□□□□ -1.43
SP110-208	ENST00000463022	KRT28	Q7Z3Y7	464 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	NUDT16	Q96DE0	195 aa	Known RBP	6.13	□□□□□ -1.43
SP110-208	ENST00000463022	CDK19	Q9BWU1	502 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	CCDC61	Q9Y6R9	512 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	POLR3A	O14802	1390 aa	Predicted RBP	6.13	□□□□□ -1.43
SP110-208	ENST00000463022	ARHGEF10	O15013	1369 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	BRD4	O60885	1362 aa	Predicted RBP	6.13	□□□□□ -1.43
SP110-208	ENST00000463022	TNS3	Q68CZ2	1445 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	TOPAZ1	Q8N9V7	1692 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	QRICH2	Q9H0J4	1663 aa		6.13	□□□□□ -1.43
SP110-208	ENST00000463022	NUBP1	P53384	320 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	EVX2	Q03828	476 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	ILDR2	Q71H61	639 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	EVC2	Q86UK5	1308 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	RASEF	Q8IZ41	740 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	KLHL34	Q8N239	644 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	CARD11	Q9BXL7	1154 aa		6.12	□□□□□ -1.43
SP110-208	ENST00000463022	RGS17	Q9UGC6	210 aa	Predicted RBP	6.12	□□□□□ -1.43
SP110-208	ENST00000463022	TRPM3	Q9HCF6	1732 aa	Predicted RBP	6.11	□□□□□ -1.43
SP110-208	ENST00000463022	NUTM2B	A6NNL0	878 aa	Predicted RBP	6.11	□□□□□ -1.43
SP110-208	ENST00000463022	NUTM2E	B1AL46	878 aa	Predicted RBP	6.11	□□□□□ -1.43
SP110-208	ENST00000463022	POTEH	Q6S545	545 aa		6.11	□□□□□ -1.43
SP110-208	ENST00000463022	NUTM2A	Q8IVF1	878 aa	Predicted RBP	6.11	□□□□□ -1.43
SP110-208	ENST00000463022	NGDN	Q8NEJ9	315 aa	Known RBP	6.11	□□□□□ -1.43
SP110-208	ENST00000463022	PMFBP1	Q8TBY8	1022 aa		6.11	□□□□□ -1.43
SP110-208	ENST00000463022	PUS7	Q96PZ0	661 aa	Known RBP	6.11	□□□□□ -1.43
SP110-208	ENST00000463022	ALS2	Q96Q42	1657 aa		6.1	□□□□□ -1.43
SP110-208	ENST00000463022	ATAD2	Q6PL18	1390 aa		6.1	□□□□□ -1.43
SP110-208	ENST00000463022	SOCS7	O14512	581 aa		6.1	□□□□□ -1.43
SP110-208	ENST00000463022	SRPK2	P78362	688 aa	Known RBP	6.1	□□□□□ -1.43
SP110-208	ENST00000463022	XPC	Q01831	940 aa	Predicted RBP	6.1	□□□□□ -1.43
SP110-208	ENST00000463022	FNBP4	Q8N3X1	1017 aa	Predicted RBP	6.1	□□□□□ -1.43
SP110-208	ENST00000463022	RTN4	Q9NQC3	1192 aa	Known RBP	6.1	□□□□□ -1.43
SP110-208	ENST00000463022	CDK12	Q9NYV4	1490 aa	Predicted RBP	6.09	□□□□□ -1.43
SP110-208	ENST00000463022	PPIP5K1	Q6PFW1	1433 aa		6.09	□□□□□ -1.43
SP110-208	ENST00000463022	ACE	P12821	1306 aa		6.09	□□□□□ -1.43
SP110-208	ENST00000463022	AFF2	P51816	1311 aa		6.09	□□□□□ -1.43
SP110-208	ENST00000463022	MARF1	Q9Y4F3	1742 aa	Known RBP	6.09	□□□□□ -1.43
SP110-208	ENST00000463022	POTEA	Q6S8J7	498 aa		6.09	□□□□□ -1.43
SP110-208	ENST00000463022	C8orf37	Q96NL8	207 aa		6.09	□□□□□ -1.43
SP110-208	ENST00000463022	CABP2	Q9NPB3	220 aa		6.09	□□□□□ -1.43
SP110-208	ENST00000463022	ADAMTS2	O95450	1211 aa		6.08	□□□□□ -1.44
SP110-208	ENST00000463022	CCER1	Q8TC90	406 aa	Predicted RBP	6.08	□□□□□ -1.44
SP110-208	ENST00000463022	NGLY1	Q96IV0	654 aa		6.08	□□□□□ -1.44
SP110-208	ENST00000463022	ABCA3	Q99758	1704 aa		6.08	□□□□□ -1.44
SP110-208	ENST00000463022	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	6.08	□□□□□ -1.44
SP110-208	ENST00000463022	USP6	P35125	1406 aa		6.08	□□□□□ -1.44
SP110-208	ENST00000463022	NINL	Q9Y2I6	1382 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	RXRB	P28702	533 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	SPOCK2	Q92563	424 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	TESK2	Q96S53	571 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	CABP1	Q9NZU7	370 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	USP21	Q9UK80	565 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	TRPC5	Q9UL62	973 aa	Predicted RBP	6.07	□□□□□ -1.44
SP110-208	ENST00000463022	SLIT2	O94813	1529 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	NWD2	Q9ULI1	1742 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	ATRN	O75882	1429 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	CPSF1	Q10570	1443 aa	Known RBP	6.07	□□□□□ -1.44
SP110-208	ENST00000463022	SSH2	Q76I76	1423 aa		6.07	□□□□□ -1.44
SP110-208	ENST00000463022	USP47	Q96K76	1375 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	USP19	O94966	1318 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	TTC21A	Q8NDW8	1320 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	CRYBG1	Q9Y4K1	1723 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	ST20-MTHFS	A0A0A6YYL1	179 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	PAK3	O75914	559 aa	Predicted RBP	6.06	□□□□□ -1.44
SP110-208	ENST00000463022	HAP1	P54257	671 aa	Predicted RBP	6.06	□□□□□ -1.44
SP110-208	ENST00000463022	RBM6	P78332	1123 aa	Known RBP	6.06	□□□□□ -1.44
SP110-208	ENST00000463022	CDCA8	Q53HL2	280 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	LMOD2	Q6P5Q4	547 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	QTRT2	Q9H974	415 aa	Known RBP	6.06	□□□□□ -1.44
SP110-208	ENST00000463022	BCL9L	Q86UU0	1499 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	AKAP12	Q02952	1782 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	CPD	O75976	1380 aa		6.06	□□□□□ -1.44
SP110-208	ENST00000463022	TMF1	P82094	1093 aa		6.05	□□□□□ -1.44
SP110-208	ENST00000463022	NLRP13	Q86W25	1043 aa		6.05	□□□□□ -1.44
SP110-208	ENST00000463022	UNC5CL	Q8IV45	518 aa		6.05	□□□□□ -1.44
SP110-208	ENST00000463022	ABTB2	Q8N961	1025 aa		6.05	□□□□□ -1.44
SP110-208	ENST00000463022	CABLES1	Q8TDN4	633 aa		6.05	□□□□□ -1.44
SP110-208	ENST00000463022	TSPYL2	Q9H2G4	693 aa	Predicted RBP	6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms