RNA–Protein interactions for RNA: ENST00000462357.1

IMP4-209, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-209ENST00000462357 TERF2IPQ9NYB0 399 aa28.74■■■□□ 2.19
IMP4-209ENST00000462357 LRP6O75581 1613 aa28.73■■■□□ 2.19
IMP4-209ENST00000462357 NLRP13Q86W25 1043 aa28.71■■■□□ 2.19
IMP4-209ENST00000462357 COL22A1Q8NFW1 1626 aaPredicted RBP28.71■■■□□ 2.19
IMP4-209ENST00000462357 NINLQ9Y2I6 1382 aa28.71■■■□□ 2.19
IMP4-209ENST00000462357 AFF2P51816 1311 aa28.7■■■□□ 2.19
IMP4-209ENST00000462357 PLEKHG5O94827 1062 aa28.7■■■□□ 2.18
IMP4-209ENST00000462357 RGS17Q9UGC6 210 aaPredicted RBP28.69■■■□□ 2.18
IMP4-209ENST00000462357 CABLES1Q8TDN4 633 aa28.68■■■□□ 2.18
IMP4-209ENST00000462357 TOPAZ1Q8N9V7 1692 aa28.67■■■□□ 2.18
IMP4-209ENST00000462357 FNBP4Q8N3X1 1017 aaPredicted RBP28.66■■■□□ 2.18
IMP4-209ENST00000462357 USP21Q9UK80 565 aa28.66■■■□□ 2.18
IMP4-209ENST00000462357 KTN1Q86UP2 1357 aaKnown RBP28.65■■■□□ 2.18
IMP4-209ENST00000462357 USP6P35125 1406 aa28.65■■■□□ 2.18
IMP4-209ENST00000462357 TTC21AQ8NDW8 1320 aa28.65■■■□□ 2.18
IMP4-209ENST00000462357 SLC12A5Q9H2X9 1139 aa28.64■■■□□ 2.18
IMP4-209ENST00000462357 NLRP6P59044 892 aa28.63■■■□□ 2.17
IMP4-209ENST00000462357 RXRBP28702 533 aa28.62■■■□□ 2.17
IMP4-209ENST00000462357 QTRT2Q9H974 415 aaKnown RBP28.62■■■□□ 2.17
IMP4-209ENST00000462357 TRPC5Q9UL62 973 aaPredicted RBP28.62■■■□□ 2.17
IMP4-209ENST00000462357 NUTM2GQ5VZR2 741 aa28.61■■■□□ 2.17
IMP4-209ENST00000462357 POTEAQ6S8J7 498 aa28.61■■■□□ 2.17
IMP4-209ENST00000462357 HSPA5P11021 654 aaKnown RBP28.6■■■□□ 2.17
IMP4-209ENST00000462357 TTC21BQ7Z4L5 1316 aa28.6■■■□□ 2.17
IMP4-209ENST00000462357 ILDR2Q71H61 639 aa28.59■■■□□ 2.17
IMP4-209ENST00000462357 CPSF1Q10570 1443 aaKnown RBP28.59■■■□□ 2.17
IMP4-209ENST00000462357 TRPM3Q9HCF6 1732 aaPredicted RBP28.58■■■□□ 2.17
IMP4-209ENST00000462357 PRDM11Q9NQV5 511 aa28.57■■■□□ 2.16
IMP4-209ENST00000462357 RBM6P78332 1123 aaKnown RBP28.56■■■□□ 2.16
IMP4-209ENST00000462357 UNC5CLQ8IV45 518 aa28.56■■■□□ 2.16
IMP4-209ENST00000462357 KCNH5Q8NCM2 988 aa28.56■■■□□ 2.16
IMP4-209ENST00000462357 GCP02774 474 aa28.54■■■□□ 2.16
IMP4-209ENST00000462357 ALS2Q96Q42 1657 aa28.54■■■□□ 2.16
IMP4-209ENST00000462357 FAM83GA6ND36 823 aa28.53■■■□□ 2.16
IMP4-209ENST00000462357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.53■■■□□ 2.16
IMP4-209ENST00000462357 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
IMP4-209ENST00000462357 USP19O94966 1318 aa28.51■■■□□ 2.15
IMP4-209ENST00000462357 ZC3H6P61129 1189 aaKnown RBP28.51■■■□□ 2.15
IMP4-209ENST00000462357 POLR3GLQ9BT43 218 aa28.51■■■□□ 2.15
IMP4-209ENST00000462357 EDC4Q6P2E9 1401 aaKnown RBP28.51■■■□□ 2.15
IMP4-209ENST00000462357 ANKRD36BQ8N2N9 1353 aa28.5■■■□□ 2.15
IMP4-209ENST00000462357 BTG4Q9NY30 223 aa28.48■■■□□ 2.15
IMP4-209ENST00000462357 A0A1W2PP64 1363 aa28.48■■■□□ 2.15
IMP4-209ENST00000462357 CCDC9Q9Y3X0 531 aaKnown RBP28.47■■■□□ 2.15
IMP4-209ENST00000462357 EVA1CP58658 441 aa28.46■■■□□ 2.15
IMP4-209ENST00000462357 KIAA0232Q92628 1395 aa28.46■■■□□ 2.15
IMP4-209ENST00000462357 SLIT2O94813 1529 aa28.45■■■□□ 2.15
IMP4-209ENST00000462357 GJD4Q96KN9 370 aaPredicted RBP28.45■■■□□ 2.14
IMP4-209ENST00000462357 SOCS7O14512 581 aa28.44■■■□□ 2.14
IMP4-209ENST00000462357 VPS72Q15906 364 aa28.44■■■□□ 2.14
IMP4-209ENST00000462357 CPDO75976 1380 aa28.44■■■□□ 2.14
IMP4-209ENST00000462357 BCL9LQ86UU0 1499 aa28.44■■■□□ 2.14
IMP4-209ENST00000462357 CD163L1Q9NR16 1453 aa28.43■■■□□ 2.14
IMP4-209ENST00000462357 USP31Q70CQ4 1352 aa28.42■■■□□ 2.14
IMP4-209ENST00000462357 COG3Q96JB2 828 aa28.42■■■□□ 2.14
IMP4-209ENST00000462357 MARF1Q9Y4F3 1742 aaKnown RBP28.42■■■□□ 2.14
IMP4-209ENST00000462357 AKAP12Q02952 1782 aa28.41■■■□□ 2.14
IMP4-209ENST00000462357 ATRNO75882 1429 aa28.41■■■□□ 2.14
IMP4-209ENST00000462357 ZBTB7CA1YPR0 619 aa28.4■■■□□ 2.14
IMP4-209ENST00000462357 CHRNA2Q15822 529 aa28.4■■■□□ 2.14
IMP4-209ENST00000462357 NME9Q86XW9 330 aa28.4■■■□□ 2.14
IMP4-209ENST00000462357 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.13
IMP4-209ENST00000462357 SOX12O15370 315 aa28.37■■■□□ 2.13
IMP4-209ENST00000462357 COL14A1Q05707 1796 aaKnown RBP28.37■■■□□ 2.13
IMP4-209ENST00000462357 ABCA3Q99758 1704 aa28.35■■■□□ 2.13
IMP4-209ENST00000462357 STRN4Q9NRL3 753 aa28.35■■■□□ 2.13
IMP4-209ENST00000462357 MON2Q7Z3U7 1717 aa28.35■■■□□ 2.13
IMP4-209ENST00000462357 AATKQ6ZMQ8 1374 aa28.34■■■□□ 2.13
IMP4-209ENST00000462357 ZEB1P37275 1124 aaPredicted RBP28.33■■■□□ 2.13
IMP4-209ENST00000462357 ARHGEF25Q86VW2 580 aa28.33■■■□□ 2.13
IMP4-209ENST00000462357 NWD2Q9ULI1 1742 aa28.32■■■□□ 2.12
IMP4-209ENST00000462357 CGNL1Q0VF96 1302 aa28.32■■■□□ 2.12
IMP4-209ENST00000462357 SLIT3O75094 1523 aa28.32■■■□□ 2.12
IMP4-209ENST00000462357 PHRF1Q9P1Y6 1649 aaKnown RBP28.31■■■□□ 2.12
IMP4-209ENST00000462357 PIK3C2AO00443 1686 aa28.3■■■□□ 2.12
IMP4-209ENST00000462357 FYB1O15117 783 aa28.3■■■□□ 2.12
IMP4-209ENST00000462357 ZRANB1Q9UGI0 708 aa28.3■■■□□ 2.12
IMP4-209ENST00000462357 NRKQ7Z2Y5 1582 aa28.29■■■□□ 2.12
IMP4-209ENST00000462357 A0A0G2JS52 829 aa28.29■■■□□ 2.12
IMP4-209ENST00000462357 MYT1Q01538 1121 aa28.29■■■□□ 2.12
IMP4-209ENST00000462357 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.29■■■□□ 2.12
IMP4-209ENST00000462357 PANK3Q9H999 370 aa28.28■■■□□ 2.12
IMP4-209ENST00000462357 CRYBG1Q9Y4K1 1723 aa28.28■■■□□ 2.12
IMP4-209ENST00000462357 SPATA31A5Q5VU36 1347 aa28.27■■■□□ 2.12
IMP4-209ENST00000462357 SPATA31A7Q8IWB4 1347 aa28.27■■■□□ 2.12
IMP4-209ENST00000462357 ONECUT3O60422 494 aaPredicted RBP28.26■■■□□ 2.11
IMP4-209ENST00000462357 CSB-PGBD3P0DP91 1061 aa28.26■■■□□ 2.11
IMP4-209ENST00000462357 CARD14Q9BXL6 1004 aa28.26■■■□□ 2.11
IMP4-209ENST00000462357 GGNBP2Q9H3C7 697 aa28.26■■■□□ 2.11
IMP4-209ENST00000462357 THRAP3Q9Y2W1 955 aaKnown RBP28.25■■■□□ 2.11
IMP4-209ENST00000462357 PLCH1Q4KWH8 1693 aa28.25■■■□□ 2.11
IMP4-209ENST00000462357 NSD3Q9BZ95 1437 aa28.25■■■□□ 2.11
IMP4-209ENST00000462357 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
IMP4-209ENST00000462357 KIF7Q2M1P5 1343 aa28.23■■■□□ 2.11
IMP4-209ENST00000462357 C11orf95C9JLR9 678 aaPredicted RBP28.23■■■□□ 2.11
IMP4-209ENST00000462357 OVOS2A0A0J9YW53 1432 aa28.23■■■□□ 2.11
IMP4-209ENST00000462357 OVOS2Q6IE36 1432 aa28.23■■■□□ 2.11
IMP4-209ENST00000462357 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
IMP4-209ENST00000462357 FAM98CQ17RN3 349 aaKnown RBP28.22■■■□□ 2.11
IMP4-209ENST00000462357 TOM1L2Q6ZVM7 507 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms