RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 YTHDC2Q9H6S0 1430 aaKnown RBP8.07□□□□□ -1.12
CLK1-207ENST00000461981 RBM10P98175 930 aaKnown RBP8.07□□□□□ -1.12
CLK1-207ENST00000461981 ADGRB1O14514 1584 aa8.07□□□□□ -1.12
CLK1-207ENST00000461981 SPATA31A3Q5VYP0 1347 aa8.07□□□□□ -1.12
CLK1-207ENST00000461981 VPS72Q15906 364 aa8.07□□□□□ -1.12
CLK1-207ENST00000461981 C14orf37Q86TY3 774 aa8.07□□□□□ -1.12
CLK1-207ENST00000461981 NOP58Q9Y2X3 529 aaKnown RBP8.07□□□□□ -1.12
CLK1-207ENST00000461981 BCL9O00512 1426 aa8.07□□□□□ -1.12
CLK1-207ENST00000461981 PHRF1Q9P1Y6 1649 aaKnown RBP8.07□□□□□ -1.12
CLK1-207ENST00000461981 PAK3O75914 559 aaPredicted RBP8.06□□□□□ -1.12
CLK1-207ENST00000461981 QTRT2Q9H974 415 aaKnown RBP8.06□□□□□ -1.12
CLK1-207ENST00000461981 BRWD3Q6RI45 1802 aa8.06□□□□□ -1.12
CLK1-207ENST00000461981 WNK3Q9BYP7 1800 aa8.06□□□□□ -1.12
CLK1-207ENST00000461981 FAM50AQ14320 339 aaKnown RBP8.06□□□□□ -1.12
CLK1-207ENST00000461981 PARP4Q9UKK3 1724 aaKnown RBP8.06□□□□□ -1.12
CLK1-207ENST00000461981 DHX57Q6P158 1386 aaKnown RBP8.06□□□□□ -1.12
CLK1-207ENST00000461981 ZRANB1Q9UGI0 708 aa8.05□□□□□ -1.12
CLK1-207ENST00000461981 AAMPQ13685 434 aa8.05□□□□□ -1.12
CLK1-207ENST00000461981 CHIC2Q9UKJ5 165 aa8.05□□□□□ -1.12
CLK1-207ENST00000461981 QSER1Q2KHR3 1735 aa8.04□□□□□ -1.12
CLK1-207ENST00000461981 TRPM1Q7Z4N2 1603 aa8.04□□□□□ -1.12
CLK1-207ENST00000461981 UNC5CLQ8IV45 518 aa8.04□□□□□ -1.12
CLK1-207ENST00000461981 KLHL34Q8N239 644 aa8.04□□□□□ -1.12
CLK1-207ENST00000461981 BRPF3Q9ULD4 1205 aa8.04□□□□□ -1.12
CLK1-207ENST00000461981 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
CLK1-207ENST00000461981 USP21Q9UK80 565 aa8.04□□□□□ -1.12
CLK1-207ENST00000461981 ARHGEF28Q8N1W1 1705 aaKnown RBP8.03□□□□□ -1.12
CLK1-207ENST00000461981 COL24A1Q17RW2 1714 aa8.03□□□□□ -1.12
CLK1-207ENST00000461981 LMO7Q8WWI1 1683 aa8.03□□□□□ -1.12
CLK1-207ENST00000461981 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
CLK1-207ENST00000461981 CPDO75976 1380 aa8.01□□□□□ -1.13
CLK1-207ENST00000461981 ZNF326Q5BKZ1 582 aaKnown RBP8.01□□□□□ -1.13
CLK1-207ENST00000461981 NUP188Q5SRE5 1749 aa8.01□□□□□ -1.13
CLK1-207ENST00000461981 QRICH2Q9H0J4 1663 aa8□□□□□ -1.13
CLK1-207ENST00000461981 CHGAP10645 457 aaKnown RBP8□□□□□ -1.13
CLK1-207ENST00000461981 SLIT3O75094 1523 aa8□□□□□ -1.13
CLK1-207ENST00000461981 PEAK1Q9H792 1746 aa8□□□□□ -1.13
CLK1-207ENST00000461981 HMGB2P26583 209 aaKnown RBP8□□□□□ -1.13
CLK1-207ENST00000461981 RSPH6AQ9H0K4 717 aa8□□□□□ -1.13
CLK1-207ENST00000461981 POLR3AO14802 1390 aaPredicted RBP7.99□□□□□ -1.13
CLK1-207ENST00000461981 NRKQ7Z2Y5 1582 aa7.99□□□□□ -1.13
CLK1-207ENST00000461981 FAM208AQ9UK61 1670 aaKnown RBP7.98□□□□□ -1.13
CLK1-207ENST00000461981 AATKQ6ZMQ8 1374 aa7.98□□□□□ -1.13
CLK1-207ENST00000461981 THRAP3Q9Y2W1 955 aaKnown RBP7.98□□□□□ -1.13
CLK1-207ENST00000461981 CAMTA1Q9Y6Y1 1673 aa7.98□□□□□ -1.13
CLK1-207ENST00000461981 RGPD8O14715 1765 aaPredicted RBP7.98□□□□□ -1.13
CLK1-207ENST00000461981 C8orf37Q96NL8 207 aa7.97□□□□□ -1.13
CLK1-207ENST00000461981 GPRASP1Q5JY77 1395 aa7.97□□□□□ -1.13
CLK1-207ENST00000461981 NINLQ9Y2I6 1382 aa7.97□□□□□ -1.13
CLK1-207ENST00000461981 IRX6P78412 446 aaPredicted RBP7.97□□□□□ -1.13
CLK1-207ENST00000461981 BARGINQ6ZT62 677 aa7.97□□□□□ -1.13
CLK1-207ENST00000461981 TRIM52Q96A61 297 aa7.97□□□□□ -1.13
CLK1-207ENST00000461981 CASZ1Q86V15 1759 aa7.97□□□□□ -1.13
CLK1-207ENST00000461981 PHF8Q9UPP1 1060 aa7.96□□□□□ -1.13
CLK1-207ENST00000461981 BAG6P46379 1132 aa7.96□□□□□ -1.14
CLK1-207ENST00000461981 AKAP12Q02952 1782 aa7.96□□□□□ -1.14
CLK1-207ENST00000461981 SF3B2Q13435 895 aaKnown RBP7.96□□□□□ -1.14
CLK1-207ENST00000461981 USP19O94966 1318 aa7.95□□□□□ -1.14
CLK1-207ENST00000461981 KRT28Q7Z3Y7 464 aa7.95□□□□□ -1.14
CLK1-207ENST00000461981 SLC4A1APQ9BWU0 796 aaKnown RBP7.94□□□□□ -1.14
CLK1-207ENST00000461981 SPATA31A5Q5VU36 1347 aa7.94□□□□□ -1.14
CLK1-207ENST00000461981 SPATA31A7Q8IWB4 1347 aa7.94□□□□□ -1.14
CLK1-207ENST00000461981 NEFMP07197 916 aa7.94□□□□□ -1.14
CLK1-207ENST00000461981 CDCA7Q9BWT1 371 aaPredicted RBP7.94□□□□□ -1.14
CLK1-207ENST00000461981 PLEKHG2Q9H7P9 1386 aa7.94□□□□□ -1.14
CLK1-207ENST00000461981 MAP3K5Q99683 1374 aa7.94□□□□□ -1.14
CLK1-207ENST00000461981 COL18A1P39060 1754 aa7.93□□□□□ -1.14
CLK1-207ENST00000461981 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
CLK1-207ENST00000461981 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
CLK1-207ENST00000461981 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
CLK1-207ENST00000461981 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
CLK1-207ENST00000461981 PLEKHG3A1L390 1219 aa7.93□□□□□ -1.14
CLK1-207ENST00000461981 ORAI2Q96SN7 254 aa7.93□□□□□ -1.14
CLK1-207ENST00000461981 KRT27Q7Z3Y8 459 aa7.92□□□□□ -1.14
CLK1-207ENST00000461981 MPHOSPH9Q99550 1183 aa7.92□□□□□ -1.14
CLK1-207ENST00000461981 SBF2Q86WG5 1849 aa7.92□□□□□ -1.14
CLK1-207ENST00000461981 ADGRF5Q8IZF2 1346 aa7.92□□□□□ -1.14
CLK1-207ENST00000461981 PUS7Q96PZ0 661 aaKnown RBP7.92□□□□□ -1.14
CLK1-207ENST00000461981 ESCO1Q5FWF5 840 aa7.92□□□□□ -1.14
CLK1-207ENST00000461981 NHSQ6T4R5 1651 aa7.91□□□□□ -1.14
CLK1-207ENST00000461981 SBNO2Q9Y2G9 1366 aa7.91□□□□□ -1.14
CLK1-207ENST00000461981 LRRC37A3O60309 1634 aa7.91□□□□□ -1.14
CLK1-207ENST00000461981 HSP90AA2PQ14568 343 aaPredicted RBP7.91□□□□□ -1.14
CLK1-207ENST00000461981 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
CLK1-207ENST00000461981 MON2Q7Z3U7 1717 aa7.9□□□□□ -1.14
CLK1-207ENST00000461981 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.14
CLK1-207ENST00000461981 ZBTB47Q9UFB7 747 aaPredicted RBP7.9□□□□□ -1.14
CLK1-207ENST00000461981 LAS1LQ9Y4W2 734 aaKnown RBP7.9□□□□□ -1.14
CLK1-207ENST00000461981 SSH2Q76I76 1423 aa7.9□□□□□ -1.15
CLK1-207ENST00000461981 SEPT12Q8IYM1 358 aa7.89□□□□□ -1.15
CLK1-207ENST00000461981 PAPPAQ13219 1627 aa7.89□□□□□ -1.15
CLK1-207ENST00000461981 WASLO00401 505 aaPredicted RBP7.89□□□□□ -1.15
CLK1-207ENST00000461981 TAF7LQ5H9L4 462 aa7.89□□□□□ -1.15
CLK1-207ENST00000461981 SPATA31A1Q5TZJ5 1347 aa7.89□□□□□ -1.15
CLK1-207ENST00000461981 WASHC2AQ641Q2 1341 aa7.89□□□□□ -1.15
CLK1-207ENST00000461981 PLEKHH1Q9ULM0 1364 aa7.89□□□□□ -1.15
CLK1-207ENST00000461981 RBM33Q96EV2 1170 aaKnown RBP7.88□□□□□ -1.15
CLK1-207ENST00000461981 ANP32AP39687 249 aaKnown RBP7.87□□□□□ -1.15
CLK1-207ENST00000461981 ADAMTS2O95450 1211 aa7.87□□□□□ -1.15
CLK1-207ENST00000461981 OVOS2A0A0G2JMS6 1433 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms