RNA–Protein interactions for RNA: ENST00000461923.5

KRT40-203, Transcript of keratin 40, humanhuman

TSL 2

Gene KRT40, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-203ENST00000461923 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
KRT40-203ENST00000461923 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
KRT40-203ENST00000461923 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
KRT40-203ENST00000461923 TNNQ9UQP3 1299 aa15.96■□□□□ 0.15
KRT40-203ENST00000461923 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
KRT40-203ENST00000461923 NEFMP07197 916 aa15.95■□□□□ 0.14
KRT40-203ENST00000461923 CT47B1P0C2W7 299 aaPredicted RBP15.95■□□□□ 0.14
KRT40-203ENST00000461923 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
KRT40-203ENST00000461923 NRXN3Q9Y4C0 1643 aa15.95■□□□□ 0.14
KRT40-203ENST00000461923 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
KRT40-203ENST00000461923 PNPLA6Q8IY17 1366 aa15.94■□□□□ 0.14
KRT40-203ENST00000461923 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
KRT40-203ENST00000461923 CYB5RLQ6IPT4 315 aa15.94■□□□□ 0.14
KRT40-203ENST00000461923 ATP7BP35670 1465 aa15.93■□□□□ 0.14
KRT40-203ENST00000461923 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
KRT40-203ENST00000461923 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
KRT40-203ENST00000461923 CDK19Q9BWU1 502 aa15.93■□□□□ 0.14
KRT40-203ENST00000461923 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
KRT40-203ENST00000461923 PCDHB15Q9Y5E8 787 aa15.93■□□□□ 0.14
KRT40-203ENST00000461923 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
KRT40-203ENST00000461923 TSR2Q969E8 191 aaKnown RBP15.92■□□□□ 0.14
KRT40-203ENST00000461923 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
KRT40-203ENST00000461923 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
KRT40-203ENST00000461923 KNDC1Q76NI1 1749 aa15.91■□□□□ 0.14
KRT40-203ENST00000461923 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
KRT40-203ENST00000461923 SLC4A3P48751 1232 aa15.91■□□□□ 0.14
KRT40-203ENST00000461923 MVPQ14764 893 aaKnown RBP15.91■□□□□ 0.14
KRT40-203ENST00000461923 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
KRT40-203ENST00000461923 USP19O94966 1318 aa15.9■□□□□ 0.14
KRT40-203ENST00000461923 IL16Q14005 1332 aa15.9■□□□□ 0.14
KRT40-203ENST00000461923 ZKSCAN2Q63HK3 967 aa15.9■□□□□ 0.14
KRT40-203ENST00000461923 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
KRT40-203ENST00000461923 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
KRT40-203ENST00000461923 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
KRT40-203ENST00000461923 CABP1Q9NZU7 370 aa15.89■□□□□ 0.13
KRT40-203ENST00000461923 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
KRT40-203ENST00000461923 EXOSC9Q06265 439 aaKnown RBP15.89■□□□□ 0.13
KRT40-203ENST00000461923 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
KRT40-203ENST00000461923 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
KRT40-203ENST00000461923 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
KRT40-203ENST00000461923 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
KRT40-203ENST00000461923 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
KRT40-203ENST00000461923 PNNQ9H307 717 aaKnown RBP15.86■□□□□ 0.13
KRT40-203ENST00000461923 RWDD1Q9H446 243 aaPredicted RBP15.86■□□□□ 0.13
KRT40-203ENST00000461923 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
KRT40-203ENST00000461923 KIF13AQ9H1H9 1805 aa15.86■□□□□ 0.13
KRT40-203ENST00000461923 RIPK4P57078 832 aa15.86■□□□□ 0.13
KRT40-203ENST00000461923 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
KRT40-203ENST00000461923 SEC24BO95487 1268 aa15.85■□□□□ 0.13
KRT40-203ENST00000461923 TRIM27P14373 513 aa15.85■□□□□ 0.13
KRT40-203ENST00000461923 WAPLQ7Z5K2 1190 aa15.85■□□□□ 0.13
KRT40-203ENST00000461923 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
KRT40-203ENST00000461923 SSH1Q8WYL5 1049 aa15.85■□□□□ 0.13
KRT40-203ENST00000461923 FCHSD2O94868 740 aa15.84■□□□□ 0.13
KRT40-203ENST00000461923 NFKBIBQ15653 356 aa15.84■□□□□ 0.13
KRT40-203ENST00000461923 C3P01024 1663 aa15.84■□□□□ 0.13
KRT40-203ENST00000461923 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
KRT40-203ENST00000461923 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
KRT40-203ENST00000461923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.12
KRT40-203ENST00000461923 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
KRT40-203ENST00000461923 POLKQ9UBT6 870 aa15.83■□□□□ 0.12
KRT40-203ENST00000461923 CPS1P31327 1500 aa15.82■□□□□ 0.12
KRT40-203ENST00000461923 PPIP5K1Q6PFW1 1433 aa15.82■□□□□ 0.12
KRT40-203ENST00000461923 CDK12Q9NYV4 1490 aaPredicted RBP15.82■□□□□ 0.12
KRT40-203ENST00000461923 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
KRT40-203ENST00000461923 UBR1Q8IWV7 1749 aa15.81■□□□□ 0.12
KRT40-203ENST00000461923 KIF16BQ96L93 1317 aa15.8■□□□□ 0.12
KRT40-203ENST00000461923 METP08581 1390 aa15.8■□□□□ 0.12
KRT40-203ENST00000461923 FBLN1P23142 703 aa15.8■□□□□ 0.12
KRT40-203ENST00000461923 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
KRT40-203ENST00000461923 NOB1Q9ULX3 412 aaKnown RBP15.8■□□□□ 0.12
KRT40-203ENST00000461923 TECPR2O15040 1411 aa15.79■□□□□ 0.12
KRT40-203ENST00000461923 WASLO00401 505 aaPredicted RBP15.79■□□□□ 0.12
KRT40-203ENST00000461923 HDAC1Q13547 482 aaPredicted RBP15.79■□□□□ 0.12
KRT40-203ENST00000461923 ITPRIPQ8IWB1 547 aa15.79■□□□□ 0.12
KRT40-203ENST00000461923 ALDH1L2Q3SY69 923 aa15.79■□□□□ 0.12
KRT40-203ENST00000461923 MLECQ14165 292 aa15.78■□□□□ 0.12
KRT40-203ENST00000461923 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.12
KRT40-203ENST00000461923 NRKQ7Z2Y5 1582 aa15.77■□□□□ 0.12
KRT40-203ENST00000461923 TMEM57Q8N5G2 664 aa15.77■□□□□ 0.11
KRT40-203ENST00000461923 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.77■□□□□ 0.11
KRT40-203ENST00000461923 TOPAZ1Q8N9V7 1692 aa15.77■□□□□ 0.11
KRT40-203ENST00000461923 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
KRT40-203ENST00000461923 ZNF428Q96B54 188 aa15.76■□□□□ 0.11
KRT40-203ENST00000461923 TBC1D32Q96NH3 1257 aa15.76■□□□□ 0.11
KRT40-203ENST00000461923 EMILIN1Q9Y6C2 1016 aa15.76■□□□□ 0.11
KRT40-203ENST00000461923 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
KRT40-203ENST00000461923 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
KRT40-203ENST00000461923 ZBTB40Q9NUA8 1239 aa15.76■□□□□ 0.11
KRT40-203ENST00000461923 IL13P35225 146 aa15.75■□□□□ 0.11
KRT40-203ENST00000461923 NME9Q86XW9 330 aa15.75■□□□□ 0.11
KRT40-203ENST00000461923 SMC5Q8IY18 1101 aa15.75■□□□□ 0.11
KRT40-203ENST00000461923 PHACTR3Q96KR7 559 aa15.75■□□□□ 0.11
KRT40-203ENST00000461923 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
KRT40-203ENST00000461923 HMOX1P09601 288 aa15.74■□□□□ 0.11
KRT40-203ENST00000461923 BECN1Q14457 450 aa15.74■□□□□ 0.11
KRT40-203ENST00000461923 TXNDC2Q86VQ3 553 aa15.74■□□□□ 0.11
KRT40-203ENST00000461923 NUDT16Q96DE0 195 aaKnown RBP15.74■□□□□ 0.11
KRT40-203ENST00000461923 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
KRT40-203ENST00000461923 NALCNQ8IZF0 1738 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms