RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 TMC1Q8TDI8 760 aa30.03■■■□□ 2.4
ABCD4-202ENST00000460308 ZNF692Q9BU19 519 aaPredicted RBP30.02■■■□□ 2.4
ABCD4-202ENST00000460308 AFF2P51816 1311 aa30.01■■■□□ 2.4
ABCD4-202ENST00000460308 ILDR2Q71H61 639 aa30.01■■■□□ 2.39
ABCD4-202ENST00000460308 ALS2Q96Q42 1657 aa30■■■□□ 2.39
ABCD4-202ENST00000460308 ABTB2Q8N961 1025 aa29.99■■■□□ 2.39
ABCD4-202ENST00000460308 BRD4O60885 1362 aaPredicted RBP29.99■■■□□ 2.39
ABCD4-202ENST00000460308 EIF4G2P78344 907 aaKnown RBP eCLIP29.97■■■□□ 2.39
ABCD4-202ENST00000460308 POTEAQ6S8J7 498 aa29.97■■■□□ 2.39
ABCD4-202ENST00000460308 CDCA8Q53HL2 280 aa29.96■■■□□ 2.39
ABCD4-202ENST00000460308 NUTM2GQ5VZR2 741 aa29.96■■■□□ 2.39
ABCD4-202ENST00000460308 USP6P35125 1406 aa29.96■■■□□ 2.39
ABCD4-202ENST00000460308 HDGFL2Q7Z4V5 671 aaPredicted RBP29.94■■■□□ 2.38
ABCD4-202ENST00000460308 SLC12A5Q9H2X9 1139 aa29.94■■■□□ 2.38
ABCD4-202ENST00000460308 MARF1Q9Y4F3 1742 aaKnown RBP29.93■■■□□ 2.38
ABCD4-202ENST00000460308 KTN1Q86UP2 1357 aaKnown RBP29.92■■■□□ 2.38
ABCD4-202ENST00000460308 TERF2IPQ9NYB0 399 aa29.92■■■□□ 2.38
ABCD4-202ENST00000460308 USP21Q9UK80 565 aa29.92■■■□□ 2.38
ABCD4-202ENST00000460308 NLRP13Q86W25 1043 aa29.91■■■□□ 2.38
ABCD4-202ENST00000460308 FNBP4Q8N3X1 1017 aaPredicted RBP29.91■■■□□ 2.38
ABCD4-202ENST00000460308 CPSF1Q10570 1443 aaKnown RBP29.9■■■□□ 2.38
ABCD4-202ENST00000460308 HSPA5P11021 654 aaKnown RBP29.9■■■□□ 2.38
ABCD4-202ENST00000460308 AKAP12Q02952 1782 aa29.9■■■□□ 2.38
ABCD4-202ENST00000460308 QTRT2Q9H974 415 aaKnown RBP29.89■■■□□ 2.38
ABCD4-202ENST00000460308 NINLQ9Y2I6 1382 aa29.89■■■□□ 2.37
ABCD4-202ENST00000460308 TTC21BQ7Z4L5 1316 aa29.88■■■□□ 2.37
ABCD4-202ENST00000460308 ABCA3Q99758 1704 aa29.88■■■□□ 2.37
ABCD4-202ENST00000460308 NLRP6P59044 892 aa29.87■■■□□ 2.37
ABCD4-202ENST00000460308 SSH2Q76I76 1423 aa29.86■■■□□ 2.37
ABCD4-202ENST00000460308 TTC21AQ8NDW8 1320 aa29.85■■■□□ 2.37
ABCD4-202ENST00000460308 RXRBP28702 533 aa29.84■■■□□ 2.37
ABCD4-202ENST00000460308 FAM83GA6ND36 823 aa29.83■■■□□ 2.37
ABCD4-202ENST00000460308 TRPC5Q9UL62 973 aaPredicted RBP29.83■■■□□ 2.37
ABCD4-202ENST00000460308 CD163L1Q9NR16 1453 aa29.82■■■□□ 2.36
ABCD4-202ENST00000460308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.82■■■□□ 2.36
ABCD4-202ENST00000460308 ZC3H6P61129 1189 aaKnown RBP29.81■■■□□ 2.36
ABCD4-202ENST00000460308 PRDM11Q9NQV5 511 aa29.81■■■□□ 2.36
ABCD4-202ENST00000460308 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
ABCD4-202ENST00000460308 MON2Q7Z3U7 1717 aa29.8■■■□□ 2.36
ABCD4-202ENST00000460308 CRYBG1Q9Y4K1 1723 aa29.8■■■□□ 2.36
ABCD4-202ENST00000460308 UNC5CLQ8IV45 518 aa29.8■■■□□ 2.36
ABCD4-202ENST00000460308 POLR3GLQ9BT43 218 aa29.8■■■□□ 2.36
ABCD4-202ENST00000460308 USP19O94966 1318 aa29.79■■■□□ 2.36
ABCD4-202ENST00000460308 SLIT2O94813 1529 aa29.78■■■□□ 2.36
ABCD4-202ENST00000460308 GCP02774 474 aa29.78■■■□□ 2.36
ABCD4-202ENST00000460308 RBM6P78332 1123 aaKnown RBP29.78■■■□□ 2.36
ABCD4-202ENST00000460308 BCL9LQ86UU0 1499 aa29.78■■■□□ 2.36
ABCD4-202ENST00000460308 PHRF1Q9P1Y6 1649 aaKnown RBP29.78■■■□□ 2.36
ABCD4-202ENST00000460308 EDC4Q6P2E9 1401 aaKnown RBP29.77■■■□□ 2.36
ABCD4-202ENST00000460308 KIAA0232Q92628 1395 aa29.76■■■□□ 2.35
ABCD4-202ENST00000460308 NRKQ7Z2Y5 1582 aa29.75■■■□□ 2.35
ABCD4-202ENST00000460308 BTG4Q9NY30 223 aa29.75■■■□□ 2.35
ABCD4-202ENST00000460308 PIK3C2AO00443 1686 aa29.75■■■□□ 2.35
ABCD4-202ENST00000460308 ANKRD36BQ8N2N9 1353 aa29.75■■■□□ 2.35
ABCD4-202ENST00000460308 COL14A1Q05707 1796 aaKnown RBP29.73■■■□□ 2.35
ABCD4-202ENST00000460308 CHRNA2Q15822 529 aa29.73■■■□□ 2.35
ABCD4-202ENST00000460308 PLCH1Q4KWH8 1693 aa29.72■■■□□ 2.35
ABCD4-202ENST00000460308 ATRNO75882 1429 aa29.72■■■□□ 2.35
ABCD4-202ENST00000460308 NME9Q86XW9 330 aa29.72■■■□□ 2.35
ABCD4-202ENST00000460308 KCNH5Q8NCM2 988 aa29.72■■■□□ 2.35
ABCD4-202ENST00000460308 NWD2Q9ULI1 1742 aa29.71■■■□□ 2.35
ABCD4-202ENST00000460308 CCDC9Q9Y3X0 531 aaKnown RBP29.71■■■□□ 2.35
ABCD4-202ENST00000460308 ZBTB7CA1YPR0 619 aa29.7■■■□□ 2.35
ABCD4-202ENST00000460308 GJD4Q96KN9 370 aaPredicted RBP29.7■■■□□ 2.35
ABCD4-202ENST00000460308 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.7■■■□□ 2.34
ABCD4-202ENST00000460308 SOCS7O14512 581 aa29.69■■■□□ 2.34
ABCD4-202ENST00000460308 SOX12O15370 315 aa29.69■■■□□ 2.34
ABCD4-202ENST00000460308 ZRANB1Q9UGI0 708 aa29.69■■■□□ 2.34
ABCD4-202ENST00000460308 CPDO75976 1380 aa29.68■■■□□ 2.34
ABCD4-202ENST00000460308 SLIT3O75094 1523 aa29.68■■■□□ 2.34
ABCD4-202ENST00000460308 USP31Q70CQ4 1352 aa29.67■■■□□ 2.34
ABCD4-202ENST00000460308 VPS72Q15906 364 aa29.67■■■□□ 2.34
ABCD4-202ENST00000460308 EVA1CP58658 441 aa29.65■■■□□ 2.34
ABCD4-202ENST00000460308 CDK12Q9NYV4 1490 aaPredicted RBP29.64■■■□□ 2.34
ABCD4-202ENST00000460308 STRN4Q9NRL3 753 aa29.63■■■□□ 2.33
ABCD4-202ENST00000460308 COG3Q96JB2 828 aa29.62■■■□□ 2.33
ABCD4-202ENST00000460308 MYOM1P52179 1685 aa29.61■■■□□ 2.33
ABCD4-202ENST00000460308 C11orf95C9JLR9 678 aaPredicted RBP29.61■■■□□ 2.33
ABCD4-202ENST00000460308 ARHGEF25Q86VW2 580 aa29.59■■■□□ 2.33
ABCD4-202ENST00000460308 NRAPQ86VF7 1730 aa29.59■■■□□ 2.33
ABCD4-202ENST00000460308 AATKQ6ZMQ8 1374 aa29.57■■■□□ 2.32
ABCD4-202ENST00000460308 CARD14Q9BXL6 1004 aa29.57■■■□□ 2.32
ABCD4-202ENST00000460308 USP54Q70EL1 1684 aa29.56■■■□□ 2.32
ABCD4-202ENST00000460308 RGS12O14924 1447 aa29.56■■■□□ 2.32
ABCD4-202ENST00000460308 FYB1O15117 783 aa29.56■■■□□ 2.32
ABCD4-202ENST00000460308 NSD3Q9BZ95 1437 aa29.55■■■□□ 2.32
ABCD4-202ENST00000460308 GGNBP2Q9H3C7 697 aa29.55■■■□□ 2.32
ABCD4-202ENST00000460308 CAMTA1Q9Y6Y1 1673 aa29.55■■■□□ 2.32
ABCD4-202ENST00000460308 OVOS2A0A0J9YW53 1432 aa29.54■■■□□ 2.32
ABCD4-202ENST00000460308 OVOS2Q6IE36 1432 aa29.54■■■□□ 2.32
ABCD4-202ENST00000460308 GLI3P10071 1580 aa29.54■■■□□ 2.32
ABCD4-202ENST00000460308 KIF7Q2M1P5 1343 aa29.53■■■□□ 2.32
ABCD4-202ENST00000460308 SPATA31A5Q5VU36 1347 aa29.53■■■□□ 2.32
ABCD4-202ENST00000460308 SPATA31A7Q8IWB4 1347 aa29.53■■■□□ 2.32
ABCD4-202ENST00000460308 PANK3Q9H999 370 aa29.53■■■□□ 2.32
ABCD4-202ENST00000460308 NFAT5O94916 1531 aa29.53■■■□□ 2.32
ABCD4-202ENST00000460308 LMO7Q8WWI1 1683 aa29.52■■■□□ 2.32
ABCD4-202ENST00000460308 A0A0G2JS52 829 aa29.51■■■□□ 2.31
ABCD4-202ENST00000460308 MYT1Q01538 1121 aa29.51■■■□□ 2.31
ABCD4-202ENST00000460308 LARP1Q6PKG0 1096 aaKnown RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms