RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
SCFD1-203ENST00000458591 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
SCFD1-203ENST00000458591 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
SCFD1-203ENST00000458591 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
SCFD1-203ENST00000458591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■■■□ 19.6
SCFD1-203ENST00000458591 NSD2O96028 1365 aa17.97■□□□□ 0.47
SCFD1-203ENST00000458591 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
SCFD1-203ENST00000458591 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
SCFD1-203ENST00000458591 UPF2Q9HAU5 1272 aaKnown RBP17.97■□□□□ 0.47
SCFD1-203ENST00000458591 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
SCFD1-203ENST00000458591 ARXQ96QS3 562 aa17.96■□□□□ 0.47
SCFD1-203ENST00000458591 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
SCFD1-203ENST00000458591 ADGRB2O60241 1585 aa17.96■□□□□ 0.47
SCFD1-203ENST00000458591 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
SCFD1-203ENST00000458591 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
SCFD1-203ENST00000458591 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
SCFD1-203ENST00000458591 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
SCFD1-203ENST00000458591 AAMPQ13685 434 aa17.95■□□□□ 0.46
SCFD1-203ENST00000458591 HMOX1P09601 288 aa17.94■□□□□ 0.46
SCFD1-203ENST00000458591 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
SCFD1-203ENST00000458591 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
SCFD1-203ENST00000458591 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
SCFD1-203ENST00000458591 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
SCFD1-203ENST00000458591 TERF2IPQ9NYB0 399 aa17.93■□□□□ 0.46
SCFD1-203ENST00000458591 ELL2O00472 640 aaPredicted RBP17.92■□□□□ 0.46
SCFD1-203ENST00000458591 C1orf115Q9H7X2 142 aa17.92■□□□□ 0.46
SCFD1-203ENST00000458591 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
SCFD1-203ENST00000458591 PTPRMP28827 1452 aa17.92■□□□□ 0.46
SCFD1-203ENST00000458591 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
SCFD1-203ENST00000458591 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
SCFD1-203ENST00000458591 LNPKQ9C0E8 428 aa17.91■□□□□ 0.46
SCFD1-203ENST00000458591 ZBTB40Q9NUA8 1239 aa17.91■□□□□ 0.46
SCFD1-203ENST00000458591 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
SCFD1-203ENST00000458591 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
SCFD1-203ENST00000458591 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
SCFD1-203ENST00000458591 TSPYL6Q8N831 410 aa17.89■□□□□ 0.45
SCFD1-203ENST00000458591 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.45
SCFD1-203ENST00000458591 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
SCFD1-203ENST00000458591 DIP2CQ9Y2E4 1556 aa17.89■□□□□ 0.45
SCFD1-203ENST00000458591 CT47B1P0C2W7 299 aaPredicted RBP17.89■□□□□ 0.45
SCFD1-203ENST00000458591 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
SCFD1-203ENST00000458591 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
SCFD1-203ENST00000458591 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
SCFD1-203ENST00000458591 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
SCFD1-203ENST00000458591 MYO5BQ9ULV0 1848 aa17.88■□□□□ 0.45
SCFD1-203ENST00000458591 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
SCFD1-203ENST00000458591 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
SCFD1-203ENST00000458591 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
SCFD1-203ENST00000458591 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
SCFD1-203ENST00000458591 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
SCFD1-203ENST00000458591 IL16Q14005 1332 aa17.85■□□□□ 0.45
SCFD1-203ENST00000458591 PNPLA6Q8IY17 1366 aa17.84■□□□□ 0.45
SCFD1-203ENST00000458591 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
SCFD1-203ENST00000458591 CFAP74Q9C0B2 1584 aa17.84■□□□□ 0.45
SCFD1-203ENST00000458591 NUCB1Q02818 461 aa17.83■□□□□ 0.45
SCFD1-203ENST00000458591 ZMYM3Q14202 1370 aa17.83■□□□□ 0.45
SCFD1-203ENST00000458591 ZFYVE9O95405 1425 aa17.83■□□□□ 0.44
SCFD1-203ENST00000458591 FCHSD2O94868 740 aa17.83■□□□□ 0.44
SCFD1-203ENST00000458591 NME9Q86XW9 330 aa17.83■□□□□ 0.44
SCFD1-203ENST00000458591 FAM83GA6ND36 823 aa17.82■□□□□ 0.44
SCFD1-203ENST00000458591 VAMP4O75379 141 aa17.82■□□□□ 0.44
SCFD1-203ENST00000458591 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
SCFD1-203ENST00000458591 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
SCFD1-203ENST00000458591 CHD1LQ86WJ1 897 aa17.82■□□□□ 0.44
SCFD1-203ENST00000458591 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
SCFD1-203ENST00000458591 LRRC7Q96NW7 1537 aa17.81■□□□□ 0.44
SCFD1-203ENST00000458591 TMEM131LA2VDJ0 1609 aa17.81■□□□□ 0.44
SCFD1-203ENST00000458591 ZBTB7BO15156 539 aaPredicted RBP17.81■□□□□ 0.44
SCFD1-203ENST00000458591 MCM4P33991 863 aa17.81■□□□□ 0.44
SCFD1-203ENST00000458591 DCTN1Q14203 1278 aa17.81■□□□□ 0.44
SCFD1-203ENST00000458591 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
SCFD1-203ENST00000458591 MRPL50Q8N5N7 158 aaKnown RBP17.81■□□□□ 0.44
SCFD1-203ENST00000458591 MLECQ14165 292 aa17.8■□□□□ 0.44
SCFD1-203ENST00000458591 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
SCFD1-203ENST00000458591 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
SCFD1-203ENST00000458591 SIRT2Q8IXJ6 389 aa17.8■□□□□ 0.44
SCFD1-203ENST00000458591 NEO1Q92859 1461 aa17.8■□□□□ 0.44
SCFD1-203ENST00000458591 NFE2L2Q16236 605 aa17.79■□□□□ 0.44
SCFD1-203ENST00000458591 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
SCFD1-203ENST00000458591 MBIPQ9NS73 344 aa17.79■□□□□ 0.44
SCFD1-203ENST00000458591 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
SCFD1-203ENST00000458591 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
SCFD1-203ENST00000458591 C8orf58Q8NAV2 365 aa17.79■□□□□ 0.44
SCFD1-203ENST00000458591 FAM135BQ49AJ0 1406 aa17.78■□□□□ 0.44
SCFD1-203ENST00000458591 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
SCFD1-203ENST00000458591 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
SCFD1-203ENST00000458591 PANK2Q9BZ23 570 aa17.77■□□□□ 0.44
SCFD1-203ENST00000458591 CD2BP2O95400 341 aaKnown RBP17.77■□□□□ 0.44
SCFD1-203ENST00000458591 IL13P35225 146 aa17.77■□□□□ 0.44
SCFD1-203ENST00000458591 CHMP5Q9NZZ3 219 aa17.77■□□□□ 0.44
SCFD1-203ENST00000458591 MED14O60244 1454 aa17.77■□□□□ 0.43
SCFD1-203ENST00000458591 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
SCFD1-203ENST00000458591 PREX1Q8TCU6 1659 aa17.76■□□□□ 0.43
SCFD1-203ENST00000458591 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
SCFD1-203ENST00000458591 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
SCFD1-203ENST00000458591 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
SCFD1-203ENST00000458591 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
SCFD1-203ENST00000458591 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
SCFD1-203ENST00000458591 RRAGDQ9NQL2 400 aaPredicted RBP17.75■□□□□ 0.43
SCFD1-203ENST00000458591 TRAK2O60296 914 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms