RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TXNDC2Q86VQ3 553 aa21.64■■□□□ 1.05
CCDC43-202ENST00000457422 EDC4Q6P2E9 1401 aaKnown RBP21.64■■□□□ 1.05
CCDC43-202ENST00000457422 MON2Q7Z3U7 1717 aa21.64■■□□□ 1.05
CCDC43-202ENST00000457422 MYH16Q9H6N6 1097 aa21.63■■□□□ 1.05
CCDC43-202ENST00000457422 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
CCDC43-202ENST00000457422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
CCDC43-202ENST00000457422 PDE4AP27815 886 aa21.62■■□□□ 1.05
CCDC43-202ENST00000457422 RARSP54136 660 aaKnown RBP21.62■■□□□ 1.05
CCDC43-202ENST00000457422 SKAP1Q86WV1 359 aa21.62■■□□□ 1.05
CCDC43-202ENST00000457422 BACH2Q9BYV9 841 aa21.62■■□□□ 1.05
CCDC43-202ENST00000457422 ANP32AP39687 249 aaKnown RBP21.61■■□□□ 1.05
CCDC43-202ENST00000457422 AKAP12Q02952 1782 aa21.61■■□□□ 1.05
CCDC43-202ENST00000457422 DIAPH1O60610 1272 aaKnown RBP21.6■■□□□ 1.05
CCDC43-202ENST00000457422 MAP2P11137 1827 aaKnown RBP21.6■■□□□ 1.05
CCDC43-202ENST00000457422 ADAMTS13Q76LX8 1427 aa21.6■■□□□ 1.05
CCDC43-202ENST00000457422 PNNQ9H307 717 aaKnown RBP21.59■■□□□ 1.05
CCDC43-202ENST00000457422 ITSN1Q15811 1721 aa21.59■■□□□ 1.05
CCDC43-202ENST00000457422 TMPOP42166 694 aaKnown RBP21.59■■□□□ 1.05
CCDC43-202ENST00000457422 CT47B1P0C2W7 299 aaPredicted RBP21.58■■□□□ 1.05
CCDC43-202ENST00000457422 CANXP27824 592 aaKnown RBP21.58■■□□□ 1.05
CCDC43-202ENST00000457422 ERICH6Q7L0X2 663 aa21.58■■□□□ 1.05
CCDC43-202ENST00000457422 PLEKHG1Q9ULL1 1385 aa21.58■■□□□ 1.04
CCDC43-202ENST00000457422 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.04
CCDC43-202ENST00000457422 C3P01024 1663 aa21.57■■□□□ 1.04
CCDC43-202ENST00000457422 IL16Q14005 1332 aa21.56■■□□□ 1.04
CCDC43-202ENST00000457422 NUDT16Q96DE0 195 aaKnown RBP21.56■■□□□ 1.04
CCDC43-202ENST00000457422 LRRC7Q96NW7 1537 aa21.56■■□□□ 1.04
CCDC43-202ENST00000457422 IPO9Q96P70 1041 aaKnown RBP21.56■■□□□ 1.04
CCDC43-202ENST00000457422 POLKQ9UBT6 870 aa21.56■■□□□ 1.04
CCDC43-202ENST00000457422 TRIM35Q9UPQ4 493 aa21.56■■□□□ 1.04
CCDC43-202ENST00000457422 CCDC61Q9Y6R9 512 aa21.56■■□□□ 1.04
CCDC43-202ENST00000457422 AAMPQ13685 434 aa21.55■■□□□ 1.04
CCDC43-202ENST00000457422 AATKQ6ZMQ8 1374 aa21.55■■□□□ 1.04
CCDC43-202ENST00000457422 ROBO2Q9HCK4 1378 aa21.55■■□□□ 1.04
CCDC43-202ENST00000457422 PANK1Q8TE04 598 aa21.54■■□□□ 1.04
CCDC43-202ENST00000457422 CDK12Q9NYV4 1490 aaPredicted RBP21.54■■□□□ 1.04
CCDC43-202ENST00000457422 FCHSD2O94868 740 aa21.54■■□□□ 1.04
CCDC43-202ENST00000457422 FBLN1P23142 703 aa21.54■■□□□ 1.04
CCDC43-202ENST00000457422 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
CCDC43-202ENST00000457422 TOPAZ1Q8N9V7 1692 aa21.53■■□□□ 1.04
CCDC43-202ENST00000457422 NME9Q86XW9 330 aa21.53■■□□□ 1.04
CCDC43-202ENST00000457422 FRAT1Q92837 279 aaPredicted RBP21.53■■□□□ 1.04
CCDC43-202ENST00000457422 NOP58Q9Y2X3 529 aaKnown RBP21.53■■□□□ 1.04
CCDC43-202ENST00000457422 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.53■■□□□ 1.04
CCDC43-202ENST00000457422 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.04
CCDC43-202ENST00000457422 SLIT1O75093 1534 aa21.52■■□□□ 1.04
CCDC43-202ENST00000457422 LTKP29376 864 aa21.52■■□□□ 1.04
CCDC43-202ENST00000457422 CLUAP1Q96AJ1 413 aa21.52■■□□□ 1.04
CCDC43-202ENST00000457422 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-202ENST00000457422 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
CCDC43-202ENST00000457422 BCL2L13Q9BXK5 485 aa21.51■■□□□ 1.03
CCDC43-202ENST00000457422 ARHGAP23Q9P227 1491 aa21.51■■□□□ 1.03
CCDC43-202ENST00000457422 PRR36Q9H6K5 1346 aa21.5■■□□□ 1.03
CCDC43-202ENST00000457422 TSR2Q969E8 191 aaKnown RBP21.5■■□□□ 1.03
CCDC43-202ENST00000457422 FER1L4A9Z1Z3 1794 aa21.5■■□□□ 1.03
CCDC43-202ENST00000457422 NRKQ7Z2Y5 1582 aa21.5■■□□□ 1.03
CCDC43-202ENST00000457422 ZNF692Q9BU19 519 aaPredicted RBP21.49■■□□□ 1.03
CCDC43-202ENST00000457422 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
CCDC43-202ENST00000457422 ZRANB1Q9UGI0 708 aa21.49■■□□□ 1.03
CCDC43-202ENST00000457422 RIPK4P57078 832 aa21.48■■□□□ 1.03
CCDC43-202ENST00000457422 TNNQ9UQP3 1299 aa21.48■■□□□ 1.03
CCDC43-202ENST00000457422 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
CCDC43-202ENST00000457422 RLBP1P12271 317 aa21.46■■□□□ 1.03
CCDC43-202ENST00000457422 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
CCDC43-202ENST00000457422 PTPRUQ92729 1446 aa21.45■■□□□ 1.02
CCDC43-202ENST00000457422 IGHDP01880 384 aa21.45■■□□□ 1.02
CCDC43-202ENST00000457422 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
CCDC43-202ENST00000457422 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.02
CCDC43-202ENST00000457422 COG3Q96JB2 828 aa21.45■■□□□ 1.02
CCDC43-202ENST00000457422 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
CCDC43-202ENST00000457422 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-202ENST00000457422 IL13P35225 146 aa21.44■■□□□ 1.02
CCDC43-202ENST00000457422 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
CCDC43-202ENST00000457422 EID1Q9Y6B2 187 aa21.43■■□□□ 1.02
CCDC43-202ENST00000457422 NEFMP07197 916 aa21.43■■□□□ 1.02
CCDC43-202ENST00000457422 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
CCDC43-202ENST00000457422 SLC26A8Q96RN1 970 aa21.43■■□□□ 1.02
CCDC43-202ENST00000457422 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
CCDC43-202ENST00000457422 ZBTB47Q9UFB7 747 aaPredicted RBP21.42■■□□□ 1.02
CCDC43-202ENST00000457422 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
CCDC43-202ENST00000457422 PLEKHG3A1L390 1219 aa21.41■■□□□ 1.02
CCDC43-202ENST00000457422 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
CCDC43-202ENST00000457422 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
CCDC43-202ENST00000457422 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
CCDC43-202ENST00000457422 HMOX1P09601 288 aa21.41■■□□□ 1.02
CCDC43-202ENST00000457422 RGS3P49796 1198 aa21.4■■□□□ 1.02
CCDC43-202ENST00000457422 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
CCDC43-202ENST00000457422 MVPQ14764 893 aaKnown RBP21.4■■□□□ 1.02
CCDC43-202ENST00000457422 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
CCDC43-202ENST00000457422 TBX22Q9Y458 520 aa21.4■■□□□ 1.02
CCDC43-202ENST00000457422 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.02
CCDC43-202ENST00000457422 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.02
CCDC43-202ENST00000457422 C8orf34Q49A92 452 aa21.39■■□□□ 1.01
CCDC43-202ENST00000457422 SMC4Q9NTJ3 1288 aa21.39■■□□□ 1.01
CCDC43-202ENST00000457422 PHACTR3Q96KR7 559 aa21.38■■□□□ 1.01
CCDC43-202ENST00000457422 USP6P35125 1406 aa21.38■■□□□ 1.01
CCDC43-202ENST00000457422 DZIP1LQ8IYY4 767 aaKnown RBP21.38■■□□□ 1.01
CCDC43-202ENST00000457422 SSH1Q8WYL5 1049 aa21.38■■□□□ 1.01
CCDC43-202ENST00000457422 DLG5Q8TDM6 1919 aa21.37■■□□□ 1.01
CCDC43-202ENST00000457422 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms