RNA–Protein interactions for RNA: ENST00000456627.1

LINC00355-201, long intergenic non-protein coding RNA 355, humanhuman

TSL 2 BASIC

Gene LINC00355, Length 1,878 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00355-201ENST00000456627 ZNF335Q9H4Z2 1342 aaPredicted RBP17.18■□□□□ 0.34
LINC00355-201ENST00000456627 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
LINC00355-201ENST00000456627 ATF3P18847 181 aa17.16■□□□□ 0.34
LINC00355-201ENST00000456627 COG3Q96JB2 828 aa17.16■□□□□ 0.34
LINC00355-201ENST00000456627 POLR3AO14802 1390 aaPredicted RBP17.16■□□□□ 0.34
LINC00355-201ENST00000456627 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
LINC00355-201ENST00000456627 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
LINC00355-201ENST00000456627 ADAMTS8Q9UP79 889 aa17.14■□□□□ 0.33
LINC00355-201ENST00000456627 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
LINC00355-201ENST00000456627 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
LINC00355-201ENST00000456627 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
LINC00355-201ENST00000456627 FBLN1P23142 703 aa17.14■□□□□ 0.33
LINC00355-201ENST00000456627 ORAI2Q96SN7 254 aa17.14■□□□□ 0.33
LINC00355-201ENST00000456627 PSME1Q06323 249 aa17.12■□□□□ 0.33
LINC00355-201ENST00000456627 NRKQ7Z2Y5 1582 aa17.12■□□□□ 0.33
LINC00355-201ENST00000456627 MSH6P52701 1360 aa17.11■□□□□ 0.33
LINC00355-201ENST00000456627 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
LINC00355-201ENST00000456627 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
LINC00355-201ENST00000456627 SOX12O15370 315 aa17.1■□□□□ 0.33
LINC00355-201ENST00000456627 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
LINC00355-201ENST00000456627 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
LINC00355-201ENST00000456627 FOXO3O43524 673 aa17.1■□□□□ 0.33
LINC00355-201ENST00000456627 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
LINC00355-201ENST00000456627 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
LINC00355-201ENST00000456627 ZBED9Q6R2W3 1325 aa17.09■□□□□ 0.33
LINC00355-201ENST00000456627 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
LINC00355-201ENST00000456627 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
LINC00355-201ENST00000456627 POLKQ9UBT6 870 aa17.08■□□□□ 0.33
LINC00355-201ENST00000456627 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
LINC00355-201ENST00000456627 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
LINC00355-201ENST00000456627 CCDC146Q8IYE0 955 aa17.07■□□□□ 0.32
LINC00355-201ENST00000456627 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
LINC00355-201ENST00000456627 NLRP6P59044 892 aa17.07■□□□□ 0.32
LINC00355-201ENST00000456627 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
LINC00355-201ENST00000456627 DCCP43146 1447 aa17.07■□□□□ 0.32
LINC00355-201ENST00000456627 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
LINC00355-201ENST00000456627 MST1RQ04912 1400 aa17.06■□□□□ 0.32
LINC00355-201ENST00000456627 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
LINC00355-201ENST00000456627 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
LINC00355-201ENST00000456627 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
LINC00355-201ENST00000456627 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
LINC00355-201ENST00000456627 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
LINC00355-201ENST00000456627 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
LINC00355-201ENST00000456627 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
LINC00355-201ENST00000456627 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
LINC00355-201ENST00000456627 LMOD2Q6P5Q4 547 aa17.03■□□□□ 0.32
LINC00355-201ENST00000456627 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
LINC00355-201ENST00000456627 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
LINC00355-201ENST00000456627 INSRP06213 1382 aa17.02■□□□□ 0.32
LINC00355-201ENST00000456627 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
LINC00355-201ENST00000456627 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
LINC00355-201ENST00000456627 SHPRHQ149N8 1683 aa17.02■□□□□ 0.32
LINC00355-201ENST00000456627 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.31
LINC00355-201ENST00000456627 USP31Q70CQ4 1352 aa17.01■□□□□ 0.31
LINC00355-201ENST00000456627 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
LINC00355-201ENST00000456627 KIF1AQ12756 1690 aa17■□□□□ 0.31
LINC00355-201ENST00000456627 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
LINC00355-201ENST00000456627 PNPLA6Q8IY17 1366 aa16.99■□□□□ 0.31
LINC00355-201ENST00000456627 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
LINC00355-201ENST00000456627 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
LINC00355-201ENST00000456627 APAF1O14727 1248 aa16.98■□□□□ 0.31
LINC00355-201ENST00000456627 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
LINC00355-201ENST00000456627 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
LINC00355-201ENST00000456627 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
LINC00355-201ENST00000456627 AMPHP49418 695 aa16.97■□□□□ 0.31
LINC00355-201ENST00000456627 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
LINC00355-201ENST00000456627 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
LINC00355-201ENST00000456627 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
LINC00355-201ENST00000456627 AEBP2Q6ZN18 517 aaPredicted RBP16.95■□□□□ 0.3
LINC00355-201ENST00000456627 BRINP3Q76B58 766 aa16.95■□□□□ 0.3
LINC00355-201ENST00000456627 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
LINC00355-201ENST00000456627 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
LINC00355-201ENST00000456627 IL13P35225 146 aa16.94■□□□□ 0.3
LINC00355-201ENST00000456627 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
LINC00355-201ENST00000456627 HMOX1P09601 288 aa16.93■□□□□ 0.3
LINC00355-201ENST00000456627 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
LINC00355-201ENST00000456627 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
LINC00355-201ENST00000456627 KCNH5Q8NCM2 988 aa16.92■□□□□ 0.3
LINC00355-201ENST00000456627 MARF1Q9Y4F3 1742 aaKnown RBP16.92■□□□□ 0.3
LINC00355-201ENST00000456627 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
LINC00355-201ENST00000456627 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
LINC00355-201ENST00000456627 EIF4A2Q14240 407 aaKnown RBP16.91■□□□□ 0.3
LINC00355-201ENST00000456627 FLT4P35916 1363 aa16.91■□□□□ 0.3
LINC00355-201ENST00000456627 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
LINC00355-201ENST00000456627 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
LINC00355-201ENST00000456627 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
LINC00355-201ENST00000456627 USP54Q70EL1 1684 aa16.89■□□□□ 0.3
LINC00355-201ENST00000456627 FCHSD2O94868 740 aa16.89■□□□□ 0.29
LINC00355-201ENST00000456627 GCP02774 474 aa16.89■□□□□ 0.29
LINC00355-201ENST00000456627 NEFMP07197 916 aa16.89■□□□□ 0.29
LINC00355-201ENST00000456627 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
LINC00355-201ENST00000456627 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
LINC00355-201ENST00000456627 HOXC9P31274 260 aa16.88■□□□□ 0.29
LINC00355-201ENST00000456627 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
LINC00355-201ENST00000456627 LTV1Q96GA3 475 aaPredicted RBP16.88■□□□□ 0.29
LINC00355-201ENST00000456627 PXDNQ92626 1479 aa16.88■□□□□ 0.29
LINC00355-201ENST00000456627 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
LINC00355-201ENST00000456627 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
LINC00355-201ENST00000456627 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
LINC00355-201ENST00000456627 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms