RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SIRT1Q96EB6 747 aa16.11■□□□□ 0.17
ECHDC1-209ENST00000454591 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
ECHDC1-209ENST00000454591 FBXO31Q5XUX0 539 aaPredicted RBP16.1■□□□□ 0.17
ECHDC1-209ENST00000454591 POGKQ9P215 609 aa16.1■□□□□ 0.17
ECHDC1-209ENST00000454591 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
ECHDC1-209ENST00000454591 PPIP5K1Q6PFW1 1433 aa16.1■□□□□ 0.17
ECHDC1-209ENST00000454591 MON2Q7Z3U7 1717 aa16.1■□□□□ 0.17
ECHDC1-209ENST00000454591 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 CPS1P31327 1500 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 CANXP27824 592 aaKnown RBP16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 STK26Q9P289 416 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 TRIM35Q9UPQ4 493 aa16.09■□□□□ 0.17
ECHDC1-209ENST00000454591 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.17
ECHDC1-209ENST00000454591 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
ECHDC1-209ENST00000454591 AKAP12Q02952 1782 aa16.08■□□□□ 0.16
ECHDC1-209ENST00000454591 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.16
ECHDC1-209ENST00000454591 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
ECHDC1-209ENST00000454591 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
ECHDC1-209ENST00000454591 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
ECHDC1-209ENST00000454591 GGNBP2Q9H3C7 697 aa16.07■□□□□ 0.16
ECHDC1-209ENST00000454591 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 FCHSD2O94868 740 aa16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 RLBP1P12271 317 aa16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 NBR1Q14596 966 aa16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
ECHDC1-209ENST00000454591 BRPF1P55201 1214 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-209ENST00000454591 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
ECHDC1-209ENST00000454591 CDK12Q9NYV4 1490 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-209ENST00000454591 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
ECHDC1-209ENST00000454591 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
ECHDC1-209ENST00000454591 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
ECHDC1-209ENST00000454591 C3P01024 1663 aa16.04■□□□□ 0.16
ECHDC1-209ENST00000454591 RGS3P49796 1198 aa16.04■□□□□ 0.16
ECHDC1-209ENST00000454591 CYB5RLQ6IPT4 315 aa16.04■□□□□ 0.16
ECHDC1-209ENST00000454591 RWDD1Q9H446 243 aaPredicted RBP16.04■□□□□ 0.16
ECHDC1-209ENST00000454591 PCDHB15Q9Y5E8 787 aa16.04■□□□□ 0.16
ECHDC1-209ENST00000454591 USP19O94966 1318 aa16.03■□□□□ 0.16
ECHDC1-209ENST00000454591 FRAT1Q92837 279 aaPredicted RBP16.03■□□□□ 0.16
ECHDC1-209ENST00000454591 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.15
ECHDC1-209ENST00000454591 DZIP1LQ8IYY4 767 aaKnown RBP16.02■□□□□ 0.15
ECHDC1-209ENST00000454591 BCL11AQ9H165 835 aa16.02■□□□□ 0.15
ECHDC1-209ENST00000454591 CABP1Q9NZU7 370 aa16.02■□□□□ 0.15
ECHDC1-209ENST00000454591 ITSN1Q15811 1721 aa16.02■□□□□ 0.15
ECHDC1-209ENST00000454591 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
ECHDC1-209ENST00000454591 NRKQ7Z2Y5 1582 aa16.01■□□□□ 0.15
ECHDC1-209ENST00000454591 UBR1Q8IWV7 1749 aa16.01■□□□□ 0.15
ECHDC1-209ENST00000454591 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
ECHDC1-209ENST00000454591 RSPH6AQ9H0K4 717 aa16■□□□□ 0.15
ECHDC1-209ENST00000454591 U2SURPO15042 1029 aaKnown RBP15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 KIF16BQ96L93 1317 aa15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 WASLO00401 505 aaPredicted RBP15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 TNNQ9UQP3 1299 aa15.99■□□□□ 0.15
ECHDC1-209ENST00000454591 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-209ENST00000454591 RIPK4P57078 832 aa15.98■□□□□ 0.15
ECHDC1-209ENST00000454591 ATF7IPQ6VMQ6 1270 aa15.98■□□□□ 0.15
ECHDC1-209ENST00000454591 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
ECHDC1-209ENST00000454591 PIK3R4Q99570 1358 aa15.97■□□□□ 0.15
ECHDC1-209ENST00000454591 NEFMP07197 916 aa15.97■□□□□ 0.15
ECHDC1-209ENST00000454591 TRIM27P14373 513 aa15.97■□□□□ 0.15
ECHDC1-209ENST00000454591 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
ECHDC1-209ENST00000454591 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
ECHDC1-209ENST00000454591 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
ECHDC1-209ENST00000454591 METP08581 1390 aa15.96■□□□□ 0.15
ECHDC1-209ENST00000454591 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
ECHDC1-209ENST00000454591 ADRA2BP18089 450 aa15.96■□□□□ 0.15
ECHDC1-209ENST00000454591 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
ECHDC1-209ENST00000454591 NFE2L2Q16236 605 aa15.95■□□□□ 0.14
ECHDC1-209ENST00000454591 FTSJ3Q8IY81 847 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-209ENST00000454591 DAXXQ9UER7 740 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-209ENST00000454591 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
ECHDC1-209ENST00000454591 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
ECHDC1-209ENST00000454591 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
ECHDC1-209ENST00000454591 SMC5Q8IY18 1101 aa15.94■□□□□ 0.14
ECHDC1-209ENST00000454591 ARHGAP45Q92619 1136 aa15.94■□□□□ 0.14
ECHDC1-209ENST00000454591 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
ECHDC1-209ENST00000454591 LAS1LQ9Y4W2 734 aaKnown RBP15.94■□□□□ 0.14
ECHDC1-209ENST00000454591 IL13P35225 146 aa15.94■□□□□ 0.14
ECHDC1-209ENST00000454591 WAPLQ7Z5K2 1190 aa15.94■□□□□ 0.14
ECHDC1-209ENST00000454591 TNRQ92752 1358 aa15.93■□□□□ 0.14
ECHDC1-209ENST00000454591 ZNF853P0CG23 659 aa15.93■□□□□ 0.14
ECHDC1-209ENST00000454591 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
ECHDC1-209ENST00000454591 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
ECHDC1-209ENST00000454591 TMEM2Q9UHN6 1383 aa15.92■□□□□ 0.14
ECHDC1-209ENST00000454591 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
ECHDC1-209ENST00000454591 ADAMTS13Q76LX8 1427 aa15.91■□□□□ 0.14
ECHDC1-209ENST00000454591 PRKAR2BP31323 418 aa15.91■□□□□ 0.14
ECHDC1-209ENST00000454591 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms