RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.4
LINC00343-203ENST00000454555 BLMP54132 1417 aaPredicted RBP17.51■□□□□ 0.39
LINC00343-203ENST00000454555 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
LINC00343-203ENST00000454555 TOM1O60784 492 aa17.51■□□□□ 0.39
LINC00343-203ENST00000454555 MS4A1P11836 297 aa17.51■□□□□ 0.39
LINC00343-203ENST00000454555 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
LINC00343-203ENST00000454555 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
LINC00343-203ENST00000454555 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
LINC00343-203ENST00000454555 TOPAZ1Q8N9V7 1692 aa17.49■□□□□ 0.39
LINC00343-203ENST00000454555 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
LINC00343-203ENST00000454555 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
LINC00343-203ENST00000454555 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
LINC00343-203ENST00000454555 PHF8Q9UPP1 1060 aa17.48■□□□□ 0.39
LINC00343-203ENST00000454555 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
LINC00343-203ENST00000454555 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
LINC00343-203ENST00000454555 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
LINC00343-203ENST00000454555 RGPD8O14715 1765 aaPredicted RBP17.46■□□□□ 0.39
LINC00343-203ENST00000454555 POLR3AO14802 1390 aaPredicted RBP17.46■□□□□ 0.39
LINC00343-203ENST00000454555 BRINP3Q76B58 766 aa17.45■□□□□ 0.38
LINC00343-203ENST00000454555 UBAP1LF5GYI3 381 aa17.45■□□□□ 0.38
LINC00343-203ENST00000454555 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
LINC00343-203ENST00000454555 TERF2IPQ9NYB0 399 aa17.45■□□□□ 0.38
LINC00343-203ENST00000454555 MYOM1P52179 1685 aa17.45■□□□□ 0.38
LINC00343-203ENST00000454555 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
LINC00343-203ENST00000454555 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
LINC00343-203ENST00000454555 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
LINC00343-203ENST00000454555 ACEP12821 1306 aa17.44■□□□□ 0.38
LINC00343-203ENST00000454555 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
LINC00343-203ENST00000454555 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
LINC00343-203ENST00000454555 KIF1AQ12756 1690 aa17.43■□□□□ 0.38
LINC00343-203ENST00000454555 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
LINC00343-203ENST00000454555 PANK3Q9H999 370 aa17.43■□□□□ 0.38
LINC00343-203ENST00000454555 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
LINC00343-203ENST00000454555 FOXO3O43524 673 aa17.4■□□□□ 0.38
LINC00343-203ENST00000454555 DEKP35659 375 aaKnown RBP17.4■□□□□ 0.38
LINC00343-203ENST00000454555 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
LINC00343-203ENST00000454555 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
LINC00343-203ENST00000454555 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
LINC00343-203ENST00000454555 PSME1Q06323 249 aa17.38■□□□□ 0.37
LINC00343-203ENST00000454555 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
LINC00343-203ENST00000454555 USP6P35125 1406 aa17.38■□□□□ 0.37
LINC00343-203ENST00000454555 ROBO1Q9Y6N7 1651 aa17.38■□□□□ 0.37
LINC00343-203ENST00000454555 PIP4K2BP78356 416 aa17.38■□□□□ 0.37
LINC00343-203ENST00000454555 EXOC6Q8TAG9 804 aa17.38■□□□□ 0.37
LINC00343-203ENST00000454555 SSH2Q76I76 1423 aa17.37■□□□□ 0.37
LINC00343-203ENST00000454555 PAK3O75914 559 aaPredicted RBP17.37■□□□□ 0.37
LINC00343-203ENST00000454555 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
LINC00343-203ENST00000454555 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
LINC00343-203ENST00000454555 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
LINC00343-203ENST00000454555 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
LINC00343-203ENST00000454555 SOS2Q07890 1332 aaPredicted RBP17.36■□□□□ 0.37
LINC00343-203ENST00000454555 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
LINC00343-203ENST00000454555 ADRA2BP18089 450 aa17.35■□□□□ 0.37
LINC00343-203ENST00000454555 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
LINC00343-203ENST00000454555 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
LINC00343-203ENST00000454555 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
LINC00343-203ENST00000454555 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
LINC00343-203ENST00000454555 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
LINC00343-203ENST00000454555 PXDNQ92626 1479 aa17.34■□□□□ 0.37
LINC00343-203ENST00000454555 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
LINC00343-203ENST00000454555 NSD3Q9BZ95 1437 aa17.33■□□□□ 0.37
LINC00343-203ENST00000454555 PDE4AP27815 886 aa17.33■□□□□ 0.37
LINC00343-203ENST00000454555 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
LINC00343-203ENST00000454555 SBNO1A3KN83 1393 aa17.33■□□□□ 0.36
LINC00343-203ENST00000454555 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
LINC00343-203ENST00000454555 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.36
LINC00343-203ENST00000454555 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
LINC00343-203ENST00000454555 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
LINC00343-203ENST00000454555 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
LINC00343-203ENST00000454555 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
LINC00343-203ENST00000454555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00343-203ENST00000454555 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
LINC00343-203ENST00000454555 FYB1O15117 783 aa17.29■□□□□ 0.36
LINC00343-203ENST00000454555 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
LINC00343-203ENST00000454555 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
LINC00343-203ENST00000454555 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
LINC00343-203ENST00000454555 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
LINC00343-203ENST00000454555 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
LINC00343-203ENST00000454555 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
LINC00343-203ENST00000454555 NBR1Q14596 966 aa17.28■□□□□ 0.36
LINC00343-203ENST00000454555 NSD2O96028 1365 aa17.27■□□□□ 0.36
LINC00343-203ENST00000454555 USP31Q70CQ4 1352 aa17.27■□□□□ 0.36
LINC00343-203ENST00000454555 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.35
LINC00343-203ENST00000454555 NME9Q86XW9 330 aa17.27■□□□□ 0.35
LINC00343-203ENST00000454555 ABTB2Q8N961 1025 aa17.27■□□□□ 0.35
LINC00343-203ENST00000454555 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
LINC00343-203ENST00000454555 CDCA7LQ96GN5 454 aa17.25■□□□□ 0.35
LINC00343-203ENST00000454555 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
LINC00343-203ENST00000454555 ARHGEF10O15013 1369 aa17.25■□□□□ 0.35
LINC00343-203ENST00000454555 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
LINC00343-203ENST00000454555 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC00343-203ENST00000454555 CENPQQ7L2Z9 268 aaPredicted RBP17.25■□□□□ 0.35
LINC00343-203ENST00000454555 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
LINC00343-203ENST00000454555 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
LINC00343-203ENST00000454555 NLRP6P59044 892 aa17.23■□□□□ 0.35
LINC00343-203ENST00000454555 ZNF521Q96K83 1311 aa17.23■□□□□ 0.35
LINC00343-203ENST00000454555 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
LINC00343-203ENST00000454555 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
LINC00343-203ENST00000454555 COG3Q96JB2 828 aa17.23■□□□□ 0.35
LINC00343-203ENST00000454555 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms