RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 FSD1Q9BTV5 496 aa7.97□□□□□ -1.13
HCG18-239ENST00000454129 NOB1Q9ULX3 412 aaKnown RBP7.97□□□□□ -1.13
HCG18-239ENST00000454129 RBM33Q96EV2 1170 aaKnown RBP7.96□□□□□ -1.13
HCG18-239ENST00000454129 STRN4Q9NRL3 753 aa7.96□□□□□ -1.13
HCG18-239ENST00000454129 NEK4P51957 841 aa7.96□□□□□ -1.13
HCG18-239ENST00000454129 GOLGA6L1Q8N7Z2 621 aa7.96□□□□□ -1.13
HCG18-239ENST00000454129 A0A0U1RQG5 324 aaPredicted RBP7.96□□□□□ -1.14
HCG18-239ENST00000454129 SAFBQ15424 915 aaKnown RBP eCLIP7.96□□□□□ -1.14
HCG18-239ENST00000454129 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
HCG18-239ENST00000454129 RBM42Q9BTD8 480 aaKnown RBP7.96□□□□□ -1.14
HCG18-239ENST00000454129 NFKBIBQ15653 356 aa7.96□□□□□ -1.14
HCG18-239ENST00000454129 CNTROBQ8N137 903 aa7.96□□□□□ -1.14
HCG18-239ENST00000454129 DENND4BO75064 1496 aaPredicted RBP7.95□□□□□ -1.14
HCG18-239ENST00000454129 GNAI2P04899 355 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 PODXL2Q9NZ53 605 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 FYB1O15117 783 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 TATP17735 454 aaPredicted RBP7.95□□□□□ -1.14
HCG18-239ENST00000454129 ZNF530Q6P9A1 599 aaPredicted RBP7.95□□□□□ -1.14
HCG18-239ENST00000454129 CCDC73Q6ZRK6 1079 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 WWC1Q8IX03 1113 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 ZNF428Q96B54 188 aa7.95□□□□□ -1.14
HCG18-239ENST00000454129 CTDP1Q9Y5B0 961 aaPredicted RBP7.95□□□□□ -1.14
HCG18-239ENST00000454129 TPM2P07951 284 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 SAMD1Q6SPF0 538 aaPredicted RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 CCDC47Q96A33 483 aaKnown RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 PCMTD1Q96MG8 357 aaPredicted RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 AKNAQ7Z591 1439 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 IPO7O95373 1038 aaKnown RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 RRS1Q15050 365 aaKnown RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 SASS6Q6UVJ0 657 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 WDR63Q8IWG1 891 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 TCEAL9Q9UHQ7 104 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 ATF7IPQ6VMQ6 1270 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 ANKRD20A12PQ8NF67 263 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 GCC1Q96CN9 775 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 HOOK1Q9UJC3 728 aaKnown RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 GRIN2AQ12879 1464 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 POLR1AO95602 1720 aaPredicted RBP7.94□□□□□ -1.14
HCG18-239ENST00000454129 SDF4Q9BRK5 362 aa7.94□□□□□ -1.14
HCG18-239ENST00000454129 PSMA5P28066 241 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 MTMR7Q9Y216 660 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 CCDC61Q9Y6R9 512 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 ABCA5Q8WWZ7 1642 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 WDR62O43379 1518 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 PLEKHH2Q8IVE3 1493 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 RTEL1-TNFRSF6BF6WH68 1400 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 TOM1L2Q6ZVM7 507 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 SRCIN1Q9C0H9 1055 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 TBC1D2BQ9UPU7 963 aa7.93□□□□□ -1.14
HCG18-239ENST00000454129 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.93□□□□□ -1.14
HCG18-239ENST00000454129 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 ANKLE2Q86XL3 938 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 ANKRD30BQ9BXX2 1392 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 NINLQ9Y2I6 1382 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 KDM4AO75164 1064 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 HOMER1Q86YM7 354 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 KLHL34Q8N239 644 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 RNF214Q8ND24 703 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 BRPF3Q9ULD4 1205 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 CCT4P50991 539 aaKnown RBP7.92□□□□□ -1.14
HCG18-239ENST00000454129 ERBINQ96RT1 1412 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 EFCAB5A4FU69 1503 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 CABP4P57796 275 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 AEBP2Q6ZN18 517 aaPredicted RBP7.92□□□□□ -1.14
HCG18-239ENST00000454129 SIL1Q9H173 461 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 PRDM11Q9NQV5 511 aa7.92□□□□□ -1.14
HCG18-239ENST00000454129 PLB1Q6P1J6 1458 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 FCHSD2O94868 740 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 CT47B1P0C2W7 299 aaPredicted RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 XPCQ01831 940 aaPredicted RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 KIF6Q6ZMV9 814 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 DAPK1P53355 1430 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 PTPRKQ15262 1439 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 SMG6Q86US8 1419 aaKnown RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 EIF4G3O43432 1585 aaKnown RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 ERC1Q8IUD2 1116 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 CNNM1Q9NRU3 951 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 MYL6BP14649 208 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 ZC3H6P61129 1189 aaKnown RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 MVPQ14764 893 aaKnown RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 RABEP1Q15276 862 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 NUDT16Q96DE0 195 aaKnown RBP7.91□□□□□ -1.14
HCG18-239ENST00000454129 PRM3Q9NNZ6 103 aa7.91□□□□□ -1.14
HCG18-239ENST00000454129 NAIPQ13075 1403 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 EHBP1L1Q8N3D4 1523 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 TRAK2O60296 914 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 TNNT3P45378 269 aaPredicted RBP7.9□□□□□ -1.14
HCG18-239ENST00000454129 SART3Q15020 963 aaKnown RBP7.9□□□□□ -1.14
HCG18-239ENST00000454129 PDCP20941 246 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 TMPOP42166 694 aaKnown RBP7.9□□□□□ -1.14
HCG18-239ENST00000454129 MCM2P49736 904 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 WAPLQ7Z5K2 1190 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 LRRCC1Q9C099 1032 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 ATAD2Q6PL18 1390 aa7.9□□□□□ -1.14
HCG18-239ENST00000454129 HIP1O00291 1037 aa7.9□□□□□ -1.15
HCG18-239ENST00000454129 XBP1P17861 261 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms