RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-205ENST00000453246 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
ABCA13-205ENST00000453246 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
ABCA13-205ENST00000453246 MCM4P33991 863 aa12.11□□□□□ -0.47
ABCA13-205ENST00000453246 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.11□□□□□ -0.47
ABCA13-205ENST00000453246 SEC24BO95487 1268 aa12.11□□□□□ -0.47
ABCA13-205ENST00000453246 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
ABCA13-205ENST00000453246 GCC1Q96CN9 775 aa12.11□□□□□ -0.47
ABCA13-205ENST00000453246 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
ABCA13-205ENST00000453246 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
ABCA13-205ENST00000453246 PKNOX2Q96KN3 472 aa12.1□□□□□ -0.47
ABCA13-205ENST00000453246 EMILIN1Q9Y6C2 1016 aa12.1□□□□□ -0.47
ABCA13-205ENST00000453246 CD109Q6YHK3 1445 aa12.1□□□□□ -0.47
ABCA13-205ENST00000453246 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
ABCA13-205ENST00000453246 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
ABCA13-205ENST00000453246 CEP170Q5SW79 1584 aa12.09□□□□□ -0.47
ABCA13-205ENST00000453246 MRE11P49959 708 aa12.09□□□□□ -0.47
ABCA13-205ENST00000453246 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
ABCA13-205ENST00000453246 KDM5CP41229 1560 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 MBD5Q9P267 1494 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 PIK3C2GO75747 1445 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 RTEL1-TNFRSF6BF6WH68 1400 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 KDM2BQ8NHM5 1336 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 NME9Q86XW9 330 aa12.08□□□□□ -0.48
ABCA13-205ENST00000453246 SYAP1Q96A49 352 aaPredicted RBP12.08□□□□□ -0.48
ABCA13-205ENST00000453246 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
ABCA13-205ENST00000453246 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
ABCA13-205ENST00000453246 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
ABCA13-205ENST00000453246 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
ABCA13-205ENST00000453246 POLR3AO14802 1390 aaPredicted RBP12.07□□□□□ -0.48
ABCA13-205ENST00000453246 NLRP6P59044 892 aa12.06□□□□□ -0.48
ABCA13-205ENST00000453246 NUCB2P80303 420 aa12.06□□□□□ -0.48
ABCA13-205ENST00000453246 TEFQ10587 303 aa12.06□□□□□ -0.48
ABCA13-205ENST00000453246 ISY1Q9ULR0 285 aaKnown RBP12.06□□□□□ -0.48
ABCA13-205ENST00000453246 FYB1O15117 783 aa12.06□□□□□ -0.48
ABCA13-205ENST00000453246 MIS18AQ9NYP9 233 aa12.06□□□□□ -0.48
ABCA13-205ENST00000453246 FAM13BQ9NYF5 915 aa12.06□□□□□ -0.48
ABCA13-205ENST00000453246 BLMP54132 1417 aaPredicted RBP12.06□□□□□ -0.48
ABCA13-205ENST00000453246 NEK4P51957 841 aa12.05□□□□□ -0.48
ABCA13-205ENST00000453246 EIF2AK4Q9P2K8 1649 aaKnown RBP12.05□□□□□ -0.48
ABCA13-205ENST00000453246 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
ABCA13-205ENST00000453246 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
ABCA13-205ENST00000453246 MCM10Q7L590 875 aa12.05□□□□□ -0.48
ABCA13-205ENST00000453246 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
ABCA13-205ENST00000453246 ZMYM4Q5VZL5 1548 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 DRC7Q8IY82 874 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 SLC26A8Q96RN1 970 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 ZNF428Q96B54 188 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 GPATCH3Q96I76 525 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 MAGI2Q86UL8 1455 aa12.04□□□□□ -0.48
ABCA13-205ENST00000453246 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 FAM83GA6ND36 823 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 CHMP3Q9Y3E7 222 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 NASPP49321 788 aaPredicted RBP12.03□□□□□ -0.48
ABCA13-205ENST00000453246 RABEP1Q15276 862 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 UBE2Q2Q8WVN8 375 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 CHMP4AQ9BY43 222 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 C9orf78Q9NZ63 289 aaPredicted RBP12.03□□□□□ -0.48
ABCA13-205ENST00000453246 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 DIAPH3Q9NSV4 1193 aa12.03□□□□□ -0.48
ABCA13-205ENST00000453246 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.48
ABCA13-205ENST00000453246 PRPF40AO75400 957 aaKnown RBP12.02□□□□□ -0.48
ABCA13-205ENST00000453246 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
ABCA13-205ENST00000453246 ANKRD36BQ8N2N9 1353 aa12.02□□□□□ -0.49
ABCA13-205ENST00000453246 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
ABCA13-205ENST00000453246 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
ABCA13-205ENST00000453246 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
ABCA13-205ENST00000453246 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
ABCA13-205ENST00000453246 EXOC6BQ9Y2D4 811 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 NSD2O96028 1365 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 IFT57Q9NWB7 429 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 GNAI2P04899 355 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 MBIPQ9NS73 344 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 PLA2R1Q13018 1463 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 GNAI3P08754 354 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
ABCA13-205ENST00000453246 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
ABCA13-205ENST00000453246 HDAC5Q9UQL6 1122 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 ASXL2Q76L83 1435 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 F6X3S4 739 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
ABCA13-205ENST00000453246 PHF14O94880 888 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 HSP90B1P14625 803 aaKnown RBP11.99□□□□□ -0.49
ABCA13-205ENST00000453246 RBM10P98175 930 aaKnown RBP11.99□□□□□ -0.49
ABCA13-205ENST00000453246 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 TBC1D9Q6ZT07 1266 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 ABTB2Q8N961 1025 aa11.99□□□□□ -0.49
ABCA13-205ENST00000453246 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
ABCA13-205ENST00000453246 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
ABCA13-205ENST00000453246 MAST1Q9Y2H9 1570 aa11.98□□□□□ -0.49
ABCA13-205ENST00000453246 ABCC2Q92887 1545 aa11.98□□□□□ -0.49
ABCA13-205ENST00000453246 ERC2O15083 957 aa11.98□□□□□ -0.49
ABCA13-205ENST00000453246 IFIT2P09913 472 aaKnown RBP11.98□□□□□ -0.49
ABCA13-205ENST00000453246 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms