RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 EIF4G2P78344 907 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMPD4-212ENST00000451542 TESK2Q96S53 571 aa16.84■□□□□ 0.29
SMPD4-212ENST00000451542 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
SMPD4-212ENST00000451542 AFF2P51816 1311 aa16.83■□□□□ 0.28
SMPD4-212ENST00000451542 HDGFL2Q7Z4V5 671 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-212ENST00000451542 ABTB2Q8N961 1025 aa16.83■□□□□ 0.28
SMPD4-212ENST00000451542 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
SMPD4-212ENST00000451542 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.28
SMPD4-212ENST00000451542 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
SMPD4-212ENST00000451542 ALS2Q96Q42 1657 aa16.81■□□□□ 0.28
SMPD4-212ENST00000451542 USP6P35125 1406 aa16.81■□□□□ 0.28
SMPD4-212ENST00000451542 CABLES1Q8TDN4 633 aa16.81■□□□□ 0.28
SMPD4-212ENST00000451542 RGS17Q9UGC6 210 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-212ENST00000451542 MARF1Q9Y4F3 1742 aaKnown RBP16.8■□□□□ 0.28
SMPD4-212ENST00000451542 USP21Q9UK80 565 aa16.8■□□□□ 0.28
SMPD4-212ENST00000451542 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
SMPD4-212ENST00000451542 FNBP4Q8N3X1 1017 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-212ENST00000451542 TTC21AQ8NDW8 1320 aa16.78■□□□□ 0.28
SMPD4-212ENST00000451542 ILDR2Q71H61 639 aa16.78■□□□□ 0.28
SMPD4-212ENST00000451542 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-212ENST00000451542 RXRBP28702 533 aa16.77■□□□□ 0.28
SMPD4-212ENST00000451542 NLRP6P59044 892 aa16.77■□□□□ 0.28
SMPD4-212ENST00000451542 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
SMPD4-212ENST00000451542 POTEAQ6S8J7 498 aa16.77■□□□□ 0.28
SMPD4-212ENST00000451542 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
SMPD4-212ENST00000451542 QTRT2Q9H974 415 aaKnown RBP16.77■□□□□ 0.28
SMPD4-212ENST00000451542 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
SMPD4-212ENST00000451542 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
SMPD4-212ENST00000451542 TTC21BQ7Z4L5 1316 aa16.75■□□□□ 0.27
SMPD4-212ENST00000451542 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
SMPD4-212ENST00000451542 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
SMPD4-212ENST00000451542 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
SMPD4-212ENST00000451542 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
SMPD4-212ENST00000451542 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
SMPD4-212ENST00000451542 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
SMPD4-212ENST00000451542 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
SMPD4-212ENST00000451542 MON2Q7Z3U7 1717 aa16.72■□□□□ 0.27
SMPD4-212ENST00000451542 USP19O94966 1318 aa16.71■□□□□ 0.27
SMPD4-212ENST00000451542 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
SMPD4-212ENST00000451542 GCP02774 474 aa16.71■□□□□ 0.27
SMPD4-212ENST00000451542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMPD4-212ENST00000451542 SLIT2O94813 1529 aa16.7■□□□□ 0.26
SMPD4-212ENST00000451542 A0A1W2PP64 1363 aa16.7■□□□□ 0.26
SMPD4-212ENST00000451542 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
SMPD4-212ENST00000451542 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
SMPD4-212ENST00000451542 ZC3H6P61129 1189 aaKnown RBP16.7■□□□□ 0.26
SMPD4-212ENST00000451542 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
SMPD4-212ENST00000451542 NWD2Q9ULI1 1742 aa16.7■□□□□ 0.26
SMPD4-212ENST00000451542 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
SMPD4-212ENST00000451542 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
SMPD4-212ENST00000451542 SOCS7O14512 581 aa16.69■□□□□ 0.26
SMPD4-212ENST00000451542 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
SMPD4-212ENST00000451542 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
SMPD4-212ENST00000451542 CRYBG1Q9Y4K1 1723 aa16.69■□□□□ 0.26
SMPD4-212ENST00000451542 PHRF1Q9P1Y6 1649 aaKnown RBP16.69■□□□□ 0.26
SMPD4-212ENST00000451542 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
SMPD4-212ENST00000451542 CDK12Q9NYV4 1490 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-212ENST00000451542 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
SMPD4-212ENST00000451542 ATRNO75882 1429 aa16.68■□□□□ 0.26
SMPD4-212ENST00000451542 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
SMPD4-212ENST00000451542 CPDO75976 1380 aa16.67■□□□□ 0.26
SMPD4-212ENST00000451542 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
SMPD4-212ENST00000451542 VPS72Q15906 364 aa16.67■□□□□ 0.26
SMPD4-212ENST00000451542 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
SMPD4-212ENST00000451542 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
SMPD4-212ENST00000451542 EVA1CP58658 441 aa16.66■□□□□ 0.26
SMPD4-212ENST00000451542 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
SMPD4-212ENST00000451542 USP31Q70CQ4 1352 aa16.65■□□□□ 0.26
SMPD4-212ENST00000451542 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
SMPD4-212ENST00000451542 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
SMPD4-212ENST00000451542 NME9Q86XW9 330 aa16.64■□□□□ 0.25
SMPD4-212ENST00000451542 COG3Q96JB2 828 aa16.64■□□□□ 0.25
SMPD4-212ENST00000451542 SLIT3O75094 1523 aa16.64■□□□□ 0.25
SMPD4-212ENST00000451542 SOX12O15370 315 aa16.63■□□□□ 0.25
SMPD4-212ENST00000451542 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
SMPD4-212ENST00000451542 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
SMPD4-212ENST00000451542 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
SMPD4-212ENST00000451542 A0A0G2JS52 829 aa16.59■□□□□ 0.25
SMPD4-212ENST00000451542 MYT1Q01538 1121 aa16.59■□□□□ 0.25
SMPD4-212ENST00000451542 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
SMPD4-212ENST00000451542 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
SMPD4-212ENST00000451542 CGNL1Q0VF96 1302 aa16.58■□□□□ 0.24
SMPD4-212ENST00000451542 MYOM1P52179 1685 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 RGS12O14924 1447 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 SPATA31A5Q5VU36 1347 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 SPATA31A7Q8IWB4 1347 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
SMPD4-212ENST00000451542 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
SMPD4-212ENST00000451542 FYB1O15117 783 aa16.56■□□□□ 0.24
SMPD4-212ENST00000451542 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
SMPD4-212ENST00000451542 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
SMPD4-212ENST00000451542 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-212ENST00000451542 GGNBP2Q9H3C7 697 aa16.55■□□□□ 0.24
SMPD4-212ENST00000451542 LMO7Q8WWI1 1683 aa16.55■□□□□ 0.24
SMPD4-212ENST00000451542 GLI3P10071 1580 aa16.55■□□□□ 0.24
SMPD4-212ENST00000451542 NFAT5O94916 1531 aa16.55■□□□□ 0.24
SMPD4-212ENST00000451542 ABCC6O95255 1503 aa16.55■□□□□ 0.24
SMPD4-212ENST00000451542 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms