RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 NLRP1Q9C000 1473 aa28.4■■■□□ 2.14
TTC3-210ENST00000450533 FAM69CQ0P6D2 419 aa28.4■■■□□ 2.14
TTC3-210ENST00000450533 ZKSCAN2Q63HK3 967 aa28.38■■■□□ 2.13
TTC3-210ENST00000450533 FTSJ3Q8IY81 847 aaKnown RBP28.38■■■□□ 2.13
TTC3-210ENST00000450533 SMC4Q9NTJ3 1288 aa28.38■■■□□ 2.13
TTC3-210ENST00000450533 USP19O94966 1318 aa28.38■■■□□ 2.13
TTC3-210ENST00000450533 FBLN1P23142 703 aa28.37■■■□□ 2.13
TTC3-210ENST00000450533 AAMPQ13685 434 aa28.37■■■□□ 2.13
TTC3-210ENST00000450533 MVPQ14764 893 aaKnown RBP28.37■■■□□ 2.13
TTC3-210ENST00000450533 WAPLQ7Z5K2 1190 aa28.37■■■□□ 2.13
TTC3-210ENST00000450533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.37■■■□□ 2.137e-7■■■■■ 27.2
TTC3-210ENST00000450533 DIAPH1O60610 1272 aaKnown RBP28.36■■■□□ 2.13
TTC3-210ENST00000450533 PDZRN3Q9UPQ7 1066 aa28.36■■■□□ 2.13
TTC3-210ENST00000450533 CLTCQ00610 1675 aaKnown RBP28.36■■■□□ 2.13
TTC3-210ENST00000450533 RIPK4P57078 832 aa28.36■■■□□ 2.13
TTC3-210ENST00000450533 DZIP1LQ8IYY4 767 aaKnown RBP28.36■■■□□ 2.13
TTC3-210ENST00000450533 NFKBIBQ15653 356 aa28.35■■■□□ 2.13
TTC3-210ENST00000450533 VIRMAQ69YN4 1812 aaKnown RBP28.35■■■□□ 2.13
TTC3-210ENST00000450533 ARHGEF40Q8TER5 1519 aa28.35■■■□□ 2.13
TTC3-210ENST00000450533 ANKRD26Q9UPS8 1709 aa28.34■■■□□ 2.13
TTC3-210ENST00000450533 MED14O60244 1454 aa28.33■■■□□ 2.13
TTC3-210ENST00000450533 SSH1Q8WYL5 1049 aa28.33■■■□□ 2.13
TTC3-210ENST00000450533 RWDD1Q9H446 243 aaPredicted RBP28.33■■■□□ 2.13
TTC3-210ENST00000450533 MLECQ14165 292 aa28.32■■■□□ 2.12
TTC3-210ENST00000450533 CT47B1P0C2W7 299 aaPredicted RBP28.31■■■□□ 2.12
TTC3-210ENST00000450533 TRIM27P14373 513 aa28.31■■■□□ 2.12
TTC3-210ENST00000450533 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
TTC3-210ENST00000450533 PNPLA6Q8IY17 1366 aa28.28■■■□□ 2.12
TTC3-210ENST00000450533 ITPRIPQ8IWB1 547 aa28.27■■■□□ 2.12
TTC3-210ENST00000450533 NOB1Q9ULX3 412 aaKnown RBP28.27■■■□□ 2.12
TTC3-210ENST00000450533 A2ML1A8K2U0 1454 aa28.25■■■□□ 2.11
TTC3-210ENST00000450533 KIF20BQ96Q89 1820 aa28.25■■■□□ 2.11
TTC3-210ENST00000450533 ATF7IPQ6VMQ6 1270 aa28.25■■■□□ 2.11
TTC3-210ENST00000450533 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
TTC3-210ENST00000450533 IL16Q14005 1332 aa28.25■■■□□ 2.11
TTC3-210ENST00000450533 PRKAR2BP31323 418 aa28.24■■■□□ 2.11
TTC3-210ENST00000450533 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
TTC3-210ENST00000450533 PNNQ9H307 717 aaKnown RBP28.22■■■□□ 2.11
TTC3-210ENST00000450533 FCHSD2O94868 740 aa28.21■■■□□ 2.11
TTC3-210ENST00000450533 HMOX1P09601 288 aa28.21■■■□□ 2.11
TTC3-210ENST00000450533 LRRC7Q96NW7 1537 aa28.21■■■□□ 2.11
TTC3-210ENST00000450533 RSPH6AQ9H0K4 717 aa28.2■■■□□ 2.11
TTC3-210ENST00000450533 TMEM57Q8N5G2 664 aa28.2■■■□□ 2.1
TTC3-210ENST00000450533 DIP2BQ9P265 1576 aa28.2■■■□□ 2.1
TTC3-210ENST00000450533 DDX19BQ9UMR2 479 aa28.2■■■□□ 2.1
TTC3-210ENST00000450533 FRAT2O75474 233 aaPredicted RBP28.19■■■□□ 2.1
TTC3-210ENST00000450533 EMILIN1Q9Y6C2 1016 aa28.18■■■□□ 2.1
TTC3-210ENST00000450533 PHACTR3Q96KR7 559 aa28.18■■■□□ 2.1
TTC3-210ENST00000450533 THUMPD2Q9BTF0 503 aaKnown RBP28.17■■■□□ 2.1
TTC3-210ENST00000450533 ZRANB1Q9UGI0 708 aa28.17■■■□□ 2.1
TTC3-210ENST00000450533 NME9Q86XW9 330 aa28.16■■■□□ 2.1
TTC3-210ENST00000450533 UPF2Q9HAU5 1272 aaKnown RBP28.16■■■□□ 2.1
TTC3-210ENST00000450533 ATP7BP35670 1465 aa28.16■■■□□ 2.1
TTC3-210ENST00000450533 DLC1Q96QB1 1528 aa28.16■■■□□ 2.1
TTC3-210ENST00000450533 TXNDC2Q86VQ3 553 aa28.15■■■□□ 2.1
TTC3-210ENST00000450533 PPP6R1Q9UPN7 881 aa28.15■■■□□ 2.1
TTC3-210ENST00000450533 NCKAP5LQ9HCH0 1330 aa28.15■■■□□ 2.1
TTC3-210ENST00000450533 FAM135BQ49AJ0 1406 aa28.15■■■□□ 2.1
TTC3-210ENST00000450533 SPATA31D1Q6ZQQ2 1576 aa28.15■■■□□ 2.1
TTC3-210ENST00000450533 AGLP35573 1532 aa28.14■■■□□ 2.1
TTC3-210ENST00000450533 GSE1Q14687 1217 aa28.14■■■□□ 2.09
TTC3-210ENST00000450533 ZMYM3Q14202 1370 aa28.14■■■□□ 2.09
TTC3-210ENST00000450533 SETD1AO15047 1707 aaKnown RBP28.13■■■□□ 2.09
TTC3-210ENST00000450533 WASLO00401 505 aaPredicted RBP28.13■■■□□ 2.09
TTC3-210ENST00000450533 HDAC1Q13547 482 aaPredicted RBP28.13■■■□□ 2.09
TTC3-210ENST00000450533 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 KIF16BQ96L93 1317 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 METP08581 1390 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 TBC1D32Q96NH3 1257 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 MAP2P11137 1827 aaKnown RBP28.13■■■□□ 2.09
TTC3-210ENST00000450533 PPIP5K1Q6PFW1 1433 aa28.13■■■□□ 2.09
TTC3-210ENST00000450533 BECN1Q14457 450 aa28.12■■■□□ 2.09
TTC3-210ENST00000450533 CDC42BPGQ6DT37 1551 aa28.12■■■□□ 2.09
TTC3-210ENST00000450533 IPO8O15397 1037 aaKnown RBP28.11■■■□□ 2.09
TTC3-210ENST00000450533 SLKQ9H2G2 1235 aaPredicted RBP28.11■■■□□ 2.09
TTC3-210ENST00000450533 ZBTB40Q9NUA8 1239 aa28.11■■■□□ 2.09
TTC3-210ENST00000450533 REREQ9P2R6 1566 aa28.11■■■□□ 2.09
TTC3-210ENST00000450533 NFE2L2Q16236 605 aa28.1■■■□□ 2.09
TTC3-210ENST00000450533 ALDH1L2Q3SY69 923 aa28.08■■■□□ 2.09
TTC3-210ENST00000450533 CPSF1Q10570 1443 aaKnown RBP28.08■■■□□ 2.09
TTC3-210ENST00000450533 IL13P35225 146 aa28.07■■■□□ 2.08
TTC3-210ENST00000450533 NUDT16Q96DE0 195 aaKnown RBP28.07■■■□□ 2.08
TTC3-210ENST00000450533 EDC4Q6P2E9 1401 aaKnown RBP28.07■■■□□ 2.08
TTC3-210ENST00000450533 RRS1Q15050 365 aaKnown RBP28.07■■■□□ 2.08
TTC3-210ENST00000450533 NRXN3Q9Y4C0 1643 aa28.06■■■□□ 2.08
TTC3-210ENST00000450533 ELL2O00472 640 aaPredicted RBP28.06■■■□□ 2.08
TTC3-210ENST00000450533 SMC5Q8IY18 1101 aa28.06■■■□□ 2.08
TTC3-210ENST00000450533 TSPYL6Q8N831 410 aa28.06■■■□□ 2.08
TTC3-210ENST00000450533 MFAP1P55081 439 aaKnown RBP28.03■■■□□ 2.08
TTC3-210ENST00000450533 IL27Q8NEV9 243 aa28.03■■■□□ 2.08
TTC3-210ENST00000450533 ESF1Q9H501 851 aaKnown RBP28.03■■■□□ 2.08
TTC3-210ENST00000450533 VAMP4O75379 141 aa28.02■■■□□ 2.08
TTC3-210ENST00000450533 COG3Q96JB2 828 aa28.02■■■□□ 2.08
TTC3-210ENST00000450533 TBC1D2Q9BYX2 928 aa28.02■■■□□ 2.08
TTC3-210ENST00000450533 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.02■■■□□ 2.08
TTC3-210ENST00000450533 CCDC61Q9Y6R9 512 aa28.01■■■□□ 2.07
TTC3-210ENST00000450533 CPS1P31327 1500 aa28.01■■■□□ 2.07
TTC3-210ENST00000450533 MBIPQ9NS73 344 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms