RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 NSD3Q9BZ95 1437 aa17.45■□□□□ 0.38
HLA-DRB9-201ENST00000449413 KIF1AQ12756 1690 aa17.43■□□□□ 0.38
HLA-DRB9-201ENST00000449413 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
HLA-DRB9-201ENST00000449413 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
HLA-DRB9-201ENST00000449413 PNPLA6Q8IY17 1366 aa17.42■□□□□ 0.38
HLA-DRB9-201ENST00000449413 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
HLA-DRB9-201ENST00000449413 MST1RQ04912 1400 aa17.41■□□□□ 0.38
HLA-DRB9-201ENST00000449413 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
HLA-DRB9-201ENST00000449413 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
HLA-DRB9-201ENST00000449413 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
HLA-DRB9-201ENST00000449413 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
HLA-DRB9-201ENST00000449413 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.38
HLA-DRB9-201ENST00000449413 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
HLA-DRB9-201ENST00000449413 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
HLA-DRB9-201ENST00000449413 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.37
HLA-DRB9-201ENST00000449413 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
HLA-DRB9-201ENST00000449413 CCDC125Q86Z20 511 aa17.37■□□□□ 0.37
HLA-DRB9-201ENST00000449413 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
HLA-DRB9-201ENST00000449413 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
HLA-DRB9-201ENST00000449413 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRB9-201ENST00000449413 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
HLA-DRB9-201ENST00000449413 NSD2O96028 1365 aa17.36■□□□□ 0.37
HLA-DRB9-201ENST00000449413 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
HLA-DRB9-201ENST00000449413 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
HLA-DRB9-201ENST00000449413 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
HLA-DRB9-201ENST00000449413 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
HLA-DRB9-201ENST00000449413 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
HLA-DRB9-201ENST00000449413 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
HLA-DRB9-201ENST00000449413 USP21Q9UK80 565 aa17.35■□□□□ 0.37
HLA-DRB9-201ENST00000449413 DDX17Q92841 729 aaKnown RBP17.34■□□□□ 0.37
HLA-DRB9-201ENST00000449413 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
HLA-DRB9-201ENST00000449413 USP6P35125 1406 aa17.33■□□□□ 0.36
HLA-DRB9-201ENST00000449413 POLR3AO14802 1390 aaPredicted RBP17.33■□□□□ 0.36
HLA-DRB9-201ENST00000449413 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
HLA-DRB9-201ENST00000449413 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
HLA-DRB9-201ENST00000449413 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
HLA-DRB9-201ENST00000449413 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
HLA-DRB9-201ENST00000449413 RALBP1Q15311 655 aa17.32■□□□□ 0.36
HLA-DRB9-201ENST00000449413 ATRNO75882 1429 aa17.31■□□□□ 0.36
HLA-DRB9-201ENST00000449413 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
HLA-DRB9-201ENST00000449413 MARF1Q9Y4F3 1742 aaKnown RBP17.31■□□□□ 0.36
HLA-DRB9-201ENST00000449413 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
HLA-DRB9-201ENST00000449413 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
HLA-DRB9-201ENST00000449413 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
HLA-DRB9-201ENST00000449413 PLEKHG3A1L390 1219 aa17.3■□□□□ 0.36
HLA-DRB9-201ENST00000449413 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
HLA-DRB9-201ENST00000449413 ACEP12821 1306 aa17.28■□□□□ 0.36
HLA-DRB9-201ENST00000449413 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.36
HLA-DRB9-201ENST00000449413 SSH2Q76I76 1423 aa17.27■□□□□ 0.35
HLA-DRB9-201ENST00000449413 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
HLA-DRB9-201ENST00000449413 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
HLA-DRB9-201ENST00000449413 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
HLA-DRB9-201ENST00000449413 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
HLA-DRB9-201ENST00000449413 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
HLA-DRB9-201ENST00000449413 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
HLA-DRB9-201ENST00000449413 PHF8Q9UPP1 1060 aa17.23■□□□□ 0.35
HLA-DRB9-201ENST00000449413 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
HLA-DRB9-201ENST00000449413 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
HLA-DRB9-201ENST00000449413 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
HLA-DRB9-201ENST00000449413 BCL9LQ86UU0 1499 aa17.21■□□□□ 0.35
HLA-DRB9-201ENST00000449413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
HLA-DRB9-201ENST00000449413 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.34
HLA-DRB9-201ENST00000449413 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
HLA-DRB9-201ENST00000449413 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
HLA-DRB9-201ENST00000449413 ESCO1Q5FWF5 840 aa17.2■□□□□ 0.34
HLA-DRB9-201ENST00000449413 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
HLA-DRB9-201ENST00000449413 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
HLA-DRB9-201ENST00000449413 MRS2Q9HD23 443 aa17.2■□□□□ 0.34
HLA-DRB9-201ENST00000449413 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
HLA-DRB9-201ENST00000449413 FYB1O15117 783 aa17.19■□□□□ 0.34
HLA-DRB9-201ENST00000449413 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
HLA-DRB9-201ENST00000449413 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
HLA-DRB9-201ENST00000449413 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
HLA-DRB9-201ENST00000449413 LRP5O75197 1615 aa17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 NME9Q86XW9 330 aa17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 PXDNQ92626 1479 aa17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
HLA-DRB9-201ENST00000449413 LTN1O94822 1766 aa17.17■□□□□ 0.34
HLA-DRB9-201ENST00000449413 ABCA3Q99758 1704 aa17.16■□□□□ 0.34
HLA-DRB9-201ENST00000449413 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
HLA-DRB9-201ENST00000449413 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
HLA-DRB9-201ENST00000449413 COL3A1P02461 1466 aaPredicted RBP17.15■□□□□ 0.34
HLA-DRB9-201ENST00000449413 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
HLA-DRB9-201ENST00000449413 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
HLA-DRB9-201ENST00000449413 SLIT3O75094 1523 aa17.14■□□□□ 0.33
HLA-DRB9-201ENST00000449413 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
HLA-DRB9-201ENST00000449413 COG3Q96JB2 828 aa17.13■□□□□ 0.33
HLA-DRB9-201ENST00000449413 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
HLA-DRB9-201ENST00000449413 NFAT5O94916 1531 aa17.12■□□□□ 0.33
HLA-DRB9-201ENST00000449413 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
HLA-DRB9-201ENST00000449413 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
HLA-DRB9-201ENST00000449413 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
HLA-DRB9-201ENST00000449413 FOXO3O43524 673 aa17.1■□□□□ 0.33
HLA-DRB9-201ENST00000449413 PSME1Q06323 249 aa17.09■□□□□ 0.33
HLA-DRB9-201ENST00000449413 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
HLA-DRB9-201ENST00000449413 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
HLA-DRB9-201ENST00000449413 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms