RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 IFT172Q9UG01 1749 aa16.34■□□□□ 0.21
SHC1-210ENST00000448116 POGZQ7Z3K3 1410 aa16.34■□□□□ 0.21
SHC1-210ENST00000448116 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.21
SHC1-210ENST00000448116 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.21
SHC1-210ENST00000448116 ZMYND15Q9H091 742 aa16.33■□□□□ 0.2
SHC1-210ENST00000448116 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
SHC1-210ENST00000448116 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
SHC1-210ENST00000448116 NSD2O96028 1365 aa16.32■□□□□ 0.2
SHC1-210ENST00000448116 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
SHC1-210ENST00000448116 CABP1Q9NZU7 370 aa16.32■□□□□ 0.2
SHC1-210ENST00000448116 PUS7Q96PZ0 661 aaKnown RBP16.32■□□□□ 0.2
SHC1-210ENST00000448116 C22orf23Q9BZE7 217 aa16.32■□□□□ 0.2
SHC1-210ENST00000448116 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
SHC1-210ENST00000448116 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
SHC1-210ENST00000448116 FBXO31Q5XUX0 539 aaPredicted RBP16.31■□□□□ 0.2
SHC1-210ENST00000448116 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
SHC1-210ENST00000448116 CDK19Q9BWU1 502 aa16.31■□□□□ 0.2
SHC1-210ENST00000448116 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
SHC1-210ENST00000448116 HMOX1P09601 288 aa16.3■□□□□ 0.2
SHC1-210ENST00000448116 ABCC3O15438 1527 aa16.3■□□□□ 0.2
SHC1-210ENST00000448116 CT47B1P0C2W7 299 aaPredicted RBP16.29■□□□□ 0.2
SHC1-210ENST00000448116 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
SHC1-210ENST00000448116 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
SHC1-210ENST00000448116 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
SHC1-210ENST00000448116 GLI2P10070 1586 aa16.29■□□□□ 0.2
SHC1-210ENST00000448116 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
SHC1-210ENST00000448116 PPLO60437 1756 aa16.29■□□□□ 0.2
SHC1-210ENST00000448116 PRKAR2BP31323 418 aa16.29■□□□□ 0.2
SHC1-210ENST00000448116 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
SHC1-210ENST00000448116 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
SHC1-210ENST00000448116 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
SHC1-210ENST00000448116 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
SHC1-210ENST00000448116 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
SHC1-210ENST00000448116 NLRP1Q9C000 1473 aa16.27■□□□□ 0.19
SHC1-210ENST00000448116 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
SHC1-210ENST00000448116 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
SHC1-210ENST00000448116 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
SHC1-210ENST00000448116 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
SHC1-210ENST00000448116 ATAD2Q6PL18 1390 aa16.26■□□□□ 0.19
SHC1-210ENST00000448116 FGD1P98174 961 aa16.25■□□□□ 0.19
SHC1-210ENST00000448116 ZBTB40Q9NUA8 1239 aa16.25■□□□□ 0.19
SHC1-210ENST00000448116 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
SHC1-210ENST00000448116 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
SHC1-210ENST00000448116 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
SHC1-210ENST00000448116 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
SHC1-210ENST00000448116 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
SHC1-210ENST00000448116 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
SHC1-210ENST00000448116 ZC3H13Q5T200 1668 aaKnown RBP16.23■□□□□ 0.19
SHC1-210ENST00000448116 PHACTR3Q96KR7 559 aa16.23■□□□□ 0.19
SHC1-210ENST00000448116 FCHSD2O94868 740 aa16.22■□□□□ 0.19
SHC1-210ENST00000448116 IL16Q14005 1332 aa16.22■□□□□ 0.19
SHC1-210ENST00000448116 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
SHC1-210ENST00000448116 MLECQ14165 292 aa16.21■□□□□ 0.19
SHC1-210ENST00000448116 POLKQ9UBT6 870 aa16.21■□□□□ 0.19
SHC1-210ENST00000448116 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
SHC1-210ENST00000448116 EMILIN1Q9Y6C2 1016 aa16.21■□□□□ 0.18
SHC1-210ENST00000448116 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
SHC1-210ENST00000448116 MCM4P33991 863 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 TSPYL6Q8N831 410 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
SHC1-210ENST00000448116 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
SHC1-210ENST00000448116 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
SHC1-210ENST00000448116 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
SHC1-210ENST00000448116 RBM10P98175 930 aaKnown RBP16.19■□□□□ 0.18
SHC1-210ENST00000448116 SIGLEC1Q9BZZ2 1709 aa16.18■□□□□ 0.18
SHC1-210ENST00000448116 NUCB1Q02818 461 aa16.18■□□□□ 0.18
SHC1-210ENST00000448116 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
SHC1-210ENST00000448116 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
SHC1-210ENST00000448116 VIRMAQ69YN4 1812 aaKnown RBP16.18■□□□□ 0.18
SHC1-210ENST00000448116 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
SHC1-210ENST00000448116 ALDH1L2Q3SY69 923 aa16.18■□□□□ 0.18
SHC1-210ENST00000448116 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
SHC1-210ENST00000448116 L1TD1Q5T7N2 865 aaKnown RBP16.17■□□□□ 0.18
SHC1-210ENST00000448116 NME9Q86XW9 330 aa16.17■□□□□ 0.18
SHC1-210ENST00000448116 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
SHC1-210ENST00000448116 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
SHC1-210ENST00000448116 VAMP4O75379 141 aa16.16■□□□□ 0.18
SHC1-210ENST00000448116 GOLGA6L3A6NEY3 463 aa16.15■□□□□ 0.18
SHC1-210ENST00000448116 DCTN1Q14203 1278 aa16.15■□□□□ 0.18
SHC1-210ENST00000448116 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
SHC1-210ENST00000448116 COL3A1P02461 1466 aaPredicted RBP16.15■□□□□ 0.18
SHC1-210ENST00000448116 TRAK2O60296 914 aa16.15■□□□□ 0.18
SHC1-210ENST00000448116 PTPRMP28827 1452 aa16.15■□□□□ 0.18
SHC1-210ENST00000448116 FAM83GA6ND36 823 aa16.15■□□□□ 0.18
SHC1-210ENST00000448116 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
SHC1-210ENST00000448116 PIK3C2BO00750 1634 aa16.14■□□□□ 0.17
SHC1-210ENST00000448116 ZBTB7BO15156 539 aaPredicted RBP16.14■□□□□ 0.17
SHC1-210ENST00000448116 GNAI1P63096 354 aa16.14■□□□□ 0.17
SHC1-210ENST00000448116 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
SHC1-210ENST00000448116 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
SHC1-210ENST00000448116 CD163L1Q9NR16 1453 aa16.14■□□□□ 0.17
SHC1-210ENST00000448116 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
SHC1-210ENST00000448116 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
SHC1-210ENST00000448116 CFAP74Q9C0B2 1584 aa16.13■□□□□ 0.17
SHC1-210ENST00000448116 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
SHC1-210ENST00000448116 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms