RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FOXD4L3Q6VB84 417 aaPredicted RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 ZNF397Q8NF99 534 aaPredicted RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 ZFP91Q96JP5 570 aaPredicted RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 KIF21BO75037 1637 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 PBRM1Q86U86 1689 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 PTPN14Q15678 1187 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 ANKRD45Q5TZF3 282 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 PDZRN3Q9UPQ7 1066 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 KIAA0586Q9BVV6 1533 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 SHTN1A0MZ66 631 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 RGL3Q3MIN7 710 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 GBP3Q9H0R5 595 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 TOMM22Q9NS69 142 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 GORABQ5T7V8 394 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 STK11IPQ8N1F8 1099 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 DYDC1Q8WWB3 177 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.43
SCN11A-202ENST00000444237 STAC3Q96MF2 364 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 POLR3GO15318 223 aaPredicted RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 RRP12Q5JTH9 1297 aaKnown RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 INCENPQ9NQS7 918 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 V9GYY5 206 aaPredicted RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 ARHGAP5Q13017 1502 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 GOLGA6L7A0A1B0GV03 622 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 NEMFO60524 1076 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 KIAA1328Q86T90 577 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 GOLIM4O00461 696 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 C10orf67Q8IYJ2 551 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 BICD2Q8TD16 824 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 WDR97A6NE52 1622 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 KIF3BO15066 747 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 ZNF500O60304 480 aaPredicted RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 IGSF3O75054 1194 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 USP47Q96K76 1375 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 DZIP1LQ8IYY4 767 aaKnown RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 LMAN1P49257 510 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 MPNDQ8N594 471 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 TBC1D32Q96NH3 1257 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 CT47B1P0C2W7 299 aaPredicted RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 LRSAM1Q6UWE0 723 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 MICALCLQ6ZW33 695 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 RTF1Q92541 710 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 RSPH14Q9UHP6 348 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 MYO6Q9UM54 1294 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 TSR1Q2NL82 804 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 CPSF2Q9P2I0 782 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 ADAMTS12P58397 1594 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 WDR33Q9C0J8 1336 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 SETSIPP0DME0 302 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 BRMS1Q9HCU9 246 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 THOC2Q8NI27 1593 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 UACAQ9BZF9 1416 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 GOLGA6L10A6NI86 522 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 OS9Q13438 667 aaPredicted RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 MORC1Q86VD1 984 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC102AQ96A19 550 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 STK31Q9BXU1 1019 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 A0A0G2JS52 829 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 SF3A1Q15459 793 aaKnown RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 HECW1Q76N89 1606 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 EFCAB5A4FU69 1503 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 SMTNL1A8MU46 457 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CENPHQ9H3R5 247 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC171Q6TFL3 1326 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 PLEKHH2Q8IVE3 1493 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 APBB1O00213 710 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 ATP6V1AP38606 617 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC183Q5T5S1 534 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 GBP6Q6ZN66 633 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CDCA7LQ96GN5 454 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 C16orf45Q96MC5 204 aaPredicted RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 LRRFIP2Q9Y608 721 aaKnown RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 MRVI1Q9Y6F6 885 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 H3BQV1 296 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 MPHOSPH10O00566 681 aaKnown RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 SMC2O95347 1197 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 IFFO2Q5TF58 517 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC73Q6ZRK6 1079 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 PPM1EQ8WY54 764 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 POTEB2H3BUK9 544 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 IPO7O95373 1038 aaKnown RBP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 MAP2K2P36507 400 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 ZRSR2Q15696 482 aaKnown RBP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 USP25Q9UHP3 1055 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 ADCY5O95622 1261 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 DRC1Q96MC2 740 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 PPP1R9BQ96SB3 815 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 BAG4O95429 457 aaKnown RBP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 U2AF2P26368 475 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 C8orf34Q49A92 452 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 CEP135Q66GS9 1140 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms