RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.44
MCF2L-218ENST00000442625 GGNBP2Q9H3C7 697 aa17.83■□□□□ 0.44
MCF2L-218ENST00000442625 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
MCF2L-218ENST00000442625 ASXL2Q76L83 1435 aa17.83■□□□□ 0.44
MCF2L-218ENST00000442625 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
MCF2L-218ENST00000442625 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
MCF2L-218ENST00000442625 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
MCF2L-218ENST00000442625 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
MCF2L-218ENST00000442625 HAP1P54257 671 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-218ENST00000442625 TRIM27P14373 513 aa17.8■□□□□ 0.44
MCF2L-218ENST00000442625 CHMP5Q9NZZ3 219 aa17.8■□□□□ 0.44
MCF2L-218ENST00000442625 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
MCF2L-218ENST00000442625 ANKRD36BQ8N2N9 1353 aa17.79■□□□□ 0.44
MCF2L-218ENST00000442625 SRPK2P78362 688 aaKnown RBP17.78■□□□□ 0.44
MCF2L-218ENST00000442625 ZC3H13Q5T200 1668 aaKnown RBP17.78■□□□□ 0.44
MCF2L-218ENST00000442625 LMTK2Q8IWU2 1503 aa17.78■□□□□ 0.44
MCF2L-218ENST00000442625 TULP4Q9NRJ4 1543 aa17.78■□□□□ 0.44
MCF2L-218ENST00000442625 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
MCF2L-218ENST00000442625 TRIM35Q9UPQ4 493 aa17.77■□□□□ 0.44
MCF2L-218ENST00000442625 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.43
MCF2L-218ENST00000442625 LNPKQ9C0E8 428 aa17.77■□□□□ 0.43
MCF2L-218ENST00000442625 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.43
MCF2L-218ENST00000442625 PPLO60437 1756 aa17.77■□□□□ 0.43
MCF2L-218ENST00000442625 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
MCF2L-218ENST00000442625 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
MCF2L-218ENST00000442625 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
MCF2L-218ENST00000442625 ZNF692Q9BU19 519 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-218ENST00000442625 A0A1W2PP64 1363 aa17.75■□□□□ 0.43
MCF2L-218ENST00000442625 TMEM57Q8N5G2 664 aa17.75■□□□□ 0.43
MCF2L-218ENST00000442625 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
MCF2L-218ENST00000442625 GLI2P10070 1586 aa17.74■□□□□ 0.43
MCF2L-218ENST00000442625 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
MCF2L-218ENST00000442625 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-218ENST00000442625 GAS2L3Q86XJ1 694 aa17.74■□□□□ 0.43
MCF2L-218ENST00000442625 MINK1Q8N4C8 1332 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-218ENST00000442625 VGFO15240 615 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-218ENST00000442625 GRPEL1Q9HAV7 217 aa17.73■□□□□ 0.43
MCF2L-218ENST00000442625 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
MCF2L-218ENST00000442625 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
MCF2L-218ENST00000442625 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
MCF2L-218ENST00000442625 RAPGEF3O95398 923 aa17.72■□□□□ 0.43
MCF2L-218ENST00000442625 RIPK4P57078 832 aa17.72■□□□□ 0.43
MCF2L-218ENST00000442625 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
MCF2L-218ENST00000442625 FBLN1P23142 703 aa17.71■□□□□ 0.43
MCF2L-218ENST00000442625 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
MCF2L-218ENST00000442625 USP32Q8NFA0 1604 aa17.71■□□□□ 0.43
MCF2L-218ENST00000442625 NSD2O96028 1365 aa17.71■□□□□ 0.43
MCF2L-218ENST00000442625 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
MCF2L-218ENST00000442625 C1orf115Q9H7X2 142 aa17.71■□□□□ 0.43
MCF2L-218ENST00000442625 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.43
MCF2L-218ENST00000442625 FYB1O15117 783 aa17.71■□□□□ 0.42
MCF2L-218ENST00000442625 CLCN1P35523 988 aa17.71■□□□□ 0.42
MCF2L-218ENST00000442625 IDI1Q13907 227 aa17.71■□□□□ 0.42
MCF2L-218ENST00000442625 MRE11P49959 708 aa17.7■□□□□ 0.42
MCF2L-218ENST00000442625 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
MCF2L-218ENST00000442625 ZMYM3Q14202 1370 aa17.69■□□□□ 0.42
MCF2L-218ENST00000442625 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-218ENST00000442625 ABCC11Q96J66 1382 aa17.69■□□□□ 0.42
MCF2L-218ENST00000442625 POGZQ7Z3K3 1410 aa17.69■□□□□ 0.42
MCF2L-218ENST00000442625 ABCC3O15438 1527 aa17.69■□□□□ 0.42
MCF2L-218ENST00000442625 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
MCF2L-218ENST00000442625 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
MCF2L-218ENST00000442625 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
MCF2L-218ENST00000442625 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-218ENST00000442625 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
MCF2L-218ENST00000442625 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
MCF2L-218ENST00000442625 CAMSAP1Q5T5Y3 1602 aa17.67■□□□□ 0.42
MCF2L-218ENST00000442625 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
MCF2L-218ENST00000442625 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
MCF2L-218ENST00000442625 SIGLEC1Q9BZZ2 1709 aa17.66■□□□□ 0.42
MCF2L-218ENST00000442625 ESPNB1AK53 854 aa17.65■□□□□ 0.42
MCF2L-218ENST00000442625 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
MCF2L-218ENST00000442625 DDIT3P35638 169 aa17.65■□□□□ 0.42
MCF2L-218ENST00000442625 NEXMIFQ5QGS0 1516 aa17.65■□□□□ 0.42
MCF2L-218ENST00000442625 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
MCF2L-218ENST00000442625 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
MCF2L-218ENST00000442625 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
MCF2L-218ENST00000442625 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-218ENST00000442625 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.42
MCF2L-218ENST00000442625 THUMPD2Q9BTF0 503 aaKnown RBP17.64■□□□□ 0.42
MCF2L-218ENST00000442625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.64■□□□□ 0.413e-6■□□□□ 10.5
MCF2L-218ENST00000442625 KIF2CQ99661 725 aa17.64■□□□□ 0.41
MCF2L-218ENST00000442625 TERF2IPQ9NYB0 399 aa17.64■□□□□ 0.41
MCF2L-218ENST00000442625 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-218ENST00000442625 NUCB1Q02818 461 aa17.63■□□□□ 0.41
MCF2L-218ENST00000442625 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
MCF2L-218ENST00000442625 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
MCF2L-218ENST00000442625 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
MCF2L-218ENST00000442625 SSFA2P28290 1259 aa17.62■□□□□ 0.41
MCF2L-218ENST00000442625 RBM25P49756 843 aaKnown RBP17.62■□□□□ 0.41
MCF2L-218ENST00000442625 HMOX1P09601 288 aa17.62■□□□□ 0.41
MCF2L-218ENST00000442625 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
MCF2L-218ENST00000442625 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
MCF2L-218ENST00000442625 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
MCF2L-218ENST00000442625 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-218ENST00000442625 TRIM44Q96DX7 344 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-218ENST00000442625 IL16Q14005 1332 aa17.6■□□□□ 0.41
MCF2L-218ENST00000442625 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
MCF2L-218ENST00000442625 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
MCF2L-218ENST00000442625 CDK19Q9BWU1 502 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms