RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 MAP3K11Q16584 847 aa12.26□□□□□ -0.45
LIN54-202ENST00000442461 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
LIN54-202ENST00000442461 ZNF830Q96NB3 372 aaPredicted RBP12.26□□□□□ -0.45
LIN54-202ENST00000442461 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
LIN54-202ENST00000442461 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
LIN54-202ENST00000442461 URI1O94763 535 aaPredicted RBP12.25□□□□□ -0.45
LIN54-202ENST00000442461 BRD2P25440 801 aaKnown RBP12.25□□□□□ -0.45
LIN54-202ENST00000442461 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIN54-202ENST00000442461 CEP135Q66GS9 1140 aa12.25□□□□□ -0.45
LIN54-202ENST00000442461 A0A1B0GUL7 405 aa12.25□□□□□ -0.45
LIN54-202ENST00000442461 MVPQ14764 893 aaKnown RBP12.25□□□□□ -0.45
LIN54-202ENST00000442461 OLFM4Q6UX06 510 aa12.25□□□□□ -0.45
LIN54-202ENST00000442461 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
LIN54-202ENST00000442461 IBSPP21815 317 aaPredicted RBP12.24□□□□□ -0.45
LIN54-202ENST00000442461 CHD1LQ86WJ1 897 aa12.24□□□□□ -0.45
LIN54-202ENST00000442461 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
LIN54-202ENST00000442461 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
LIN54-202ENST00000442461 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
LIN54-202ENST00000442461 SLC26A8Q96RN1 970 aa12.24□□□□□ -0.45
LIN54-202ENST00000442461 ERC2O15083 957 aa12.24□□□□□ -0.45
LIN54-202ENST00000442461 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
LIN54-202ENST00000442461 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
LIN54-202ENST00000442461 NF2P35240 595 aa12.23□□□□□ -0.45
LIN54-202ENST00000442461 JAKMIP3Q5VZ66 844 aa12.23□□□□□ -0.45
LIN54-202ENST00000442461 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
LIN54-202ENST00000442461 CRACR2AQ9BSW2 395 aa12.23□□□□□ -0.45
LIN54-202ENST00000442461 CLIP2Q9UDT6 1046 aa12.23□□□□□ -0.45
LIN54-202ENST00000442461 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
LIN54-202ENST00000442461 CEP57L1Q8IYX8 460 aa12.23□□□□□ -0.45
LIN54-202ENST00000442461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
LIN54-202ENST00000442461 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
LIN54-202ENST00000442461 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
LIN54-202ENST00000442461 RASSF8Q8NHQ8 419 aa12.22□□□□□ -0.45
LIN54-202ENST00000442461 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
LIN54-202ENST00000442461 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
LIN54-202ENST00000442461 TRMT1Q9NXH9 659 aaKnown RBP12.22□□□□□ -0.45
LIN54-202ENST00000442461 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
LIN54-202ENST00000442461 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
LIN54-202ENST00000442461 LRRFIP2Q9Y608 721 aaKnown RBP12.22□□□□□ -0.45
LIN54-202ENST00000442461 SMTNL1A8MU46 457 aa12.21□□□□□ -0.45
LIN54-202ENST00000442461 SERPINC1P01008 464 aa12.21□□□□□ -0.45
LIN54-202ENST00000442461 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.45
LIN54-202ENST00000442461 RSPH14Q9UHP6 348 aa12.21□□□□□ -0.45
LIN54-202ENST00000442461 CCDC171Q6TFL3 1326 aa12.21□□□□□ -0.45
LIN54-202ENST00000442461 ZNF500O60304 480 aaPredicted RBP12.21□□□□□ -0.45
LIN54-202ENST00000442461 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
LIN54-202ENST00000442461 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.46
LIN54-202ENST00000442461 FAM193AP78312 1265 aa12.21□□□□□ -0.46
LIN54-202ENST00000442461 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.46
LIN54-202ENST00000442461 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
LIN54-202ENST00000442461 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 ZSCAN12O43309 604 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 SLU7O95391 586 aaKnown RBP12.2□□□□□ -0.46
LIN54-202ENST00000442461 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 TCP11L2Q8N4U5 519 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 ARFGAP3Q9NP61 516 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 SMARCE1Q969G3 411 aa12.2□□□□□ -0.46
LIN54-202ENST00000442461 SPAG9O60271 1321 aaKnown RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 CAPN2P17655 700 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 PCMTD1Q96MG8 357 aaPredicted RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 RBM28Q9NW13 759 aaKnown RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 V9GYY5 206 aaPredicted RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 CBFA2T2O43439 604 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 SARNPP82979 210 aaKnown RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 MICALL1Q8N3F8 863 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 SNX21Q969T3 373 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 CUX2O14529 1486 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 MAP9Q49MG5 647 aa12.19□□□□□ -0.46
LIN54-202ENST00000442461 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
LIN54-202ENST00000442461 KIF21BO75037 1637 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 TMX1Q9H3N1 280 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 RIPK4P57078 832 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 ZNF526Q8TF50 670 aaPredicted RBP12.18□□□□□ -0.46
LIN54-202ENST00000442461 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 CEP89Q96ST8 783 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 GSDMDP57764 484 aa12.18□□□□□ -0.46
LIN54-202ENST00000442461 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 CPLX1O14810 134 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 PSMA5P28066 241 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.17□□□□□ -0.46
LIN54-202ENST00000442461 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
LIN54-202ENST00000442461 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
LIN54-202ENST00000442461 GBP6Q6ZN66 633 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 IGHDP01880 384 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
LIN54-202ENST00000442461 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms