RNA–Protein interactions for RNA: ENST00000441947.1

LINC00315-201, long intergenic non-protein coding RNA 315, humanhuman

TSL 5 BASIC

Gene LINC00315, Length 2,323 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315-201ENST00000441947 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
LINC00315-201ENST00000441947 SRPK2P78362 688 aaKnown RBP24.35■■□□□ 1.49
LINC00315-201ENST00000441947 GSE1Q14687 1217 aa24.35■■□□□ 1.49
LINC00315-201ENST00000441947 GGNBP2Q9H3C7 697 aa24.34■■□□□ 1.49
LINC00315-201ENST00000441947 ZKSCAN2Q63HK3 967 aa24.34■■□□□ 1.49
LINC00315-201ENST00000441947 RWDD1Q9H446 243 aaPredicted RBP24.33■■□□□ 1.49
LINC00315-201ENST00000441947 YTHDC2Q9H6S0 1430 aaKnown RBP24.33■■□□□ 1.48
LINC00315-201ENST00000441947 KIF20BQ96Q89 1820 aa24.32■■□□□ 1.48
LINC00315-201ENST00000441947 TMPOP42166 694 aaKnown RBP24.32■■□□□ 1.48
LINC00315-201ENST00000441947 TSR2Q969E8 191 aaKnown RBP24.32■■□□□ 1.48
LINC00315-201ENST00000441947 TRIM35Q9UPQ4 493 aa24.32■■□□□ 1.48
LINC00315-201ENST00000441947 U2SURPO15042 1029 aaKnown RBP24.3■■□□□ 1.48
LINC00315-201ENST00000441947 FYB1O15117 783 aa24.3■■□□□ 1.48
LINC00315-201ENST00000441947 DZIP1LQ8IYY4 767 aaKnown RBP24.3■■□□□ 1.48
LINC00315-201ENST00000441947 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
LINC00315-201ENST00000441947 MINK1Q8N4C8 1332 aaPredicted RBP24.3■■□□□ 1.48
LINC00315-201ENST00000441947 FRAT2O75474 233 aaPredicted RBP24.29■■□□□ 1.48
LINC00315-201ENST00000441947 EXOSC9Q06265 439 aaKnown RBP24.29■■□□□ 1.48
LINC00315-201ENST00000441947 PRAM1Q96QH2 718 aa24.29■■□□□ 1.48
LINC00315-201ENST00000441947 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
LINC00315-201ENST00000441947 IL16Q14005 1332 aa24.28■■□□□ 1.48
LINC00315-201ENST00000441947 FTSJ3Q8IY81 847 aaKnown RBP24.28■■□□□ 1.48
LINC00315-201ENST00000441947 IL27Q8NEV9 243 aa24.27■■□□□ 1.48
LINC00315-201ENST00000441947 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
LINC00315-201ENST00000441947 SMC4Q9NTJ3 1288 aa24.27■■□□□ 1.48
LINC00315-201ENST00000441947 ARHGEF40Q8TER5 1519 aa24.26■■□□□ 1.47
LINC00315-201ENST00000441947 CDC42BPGQ6DT37 1551 aa24.26■■□□□ 1.47
LINC00315-201ENST00000441947 PNPLA6Q8IY17 1366 aa24.26■■□□□ 1.47
LINC00315-201ENST00000441947 BECN1Q14457 450 aa24.26■■□□□ 1.47
LINC00315-201ENST00000441947 TRIM27P14373 513 aa24.24■■□□□ 1.47
LINC00315-201ENST00000441947 SSH1Q8WYL5 1049 aa24.24■■□□□ 1.47
LINC00315-201ENST00000441947 TBC1D32Q96NH3 1257 aa24.24■■□□□ 1.47
LINC00315-201ENST00000441947 POGKQ9P215 609 aa24.24■■□□□ 1.47
LINC00315-201ENST00000441947 UPF2Q9HAU5 1272 aaKnown RBP24.22■■□□□ 1.47
LINC00315-201ENST00000441947 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
LINC00315-201ENST00000441947 DIAPH1O60610 1272 aaKnown RBP24.21■■□□□ 1.47
LINC00315-201ENST00000441947 HDGFL2Q7Z4V5 671 aaPredicted RBP24.21■■□□□ 1.47
LINC00315-201ENST00000441947 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
LINC00315-201ENST00000441947 ATF7IPQ6VMQ6 1270 aa24.21■■□□□ 1.47
LINC00315-201ENST00000441947 RIPK4P57078 832 aa24.2■■□□□ 1.46
LINC00315-201ENST00000441947 DDX19BQ9UMR2 479 aa24.2■■□□□ 1.46
LINC00315-201ENST00000441947 CDK19Q9BWU1 502 aa24.19■■□□□ 1.46
LINC00315-201ENST00000441947 FBXO31Q5XUX0 539 aaPredicted RBP24.18■■□□□ 1.46
LINC00315-201ENST00000441947 DLC1Q96QB1 1528 aa24.18■■□□□ 1.46
LINC00315-201ENST00000441947 ITPRIPQ8IWB1 547 aa24.17■■□□□ 1.46
LINC00315-201ENST00000441947 PNNQ9H307 717 aaKnown RBP24.17■■□□□ 1.46
LINC00315-201ENST00000441947 NOB1Q9ULX3 412 aaKnown RBP24.17■■□□□ 1.46
LINC00315-201ENST00000441947 SETD1AO15047 1707 aaKnown RBP24.17■■□□□ 1.46
LINC00315-201ENST00000441947 CABP1Q9NZU7 370 aa24.16■■□□□ 1.46
LINC00315-201ENST00000441947 FAM135BQ49AJ0 1406 aa24.16■■□□□ 1.46
LINC00315-201ENST00000441947 ANTXR1Q9H6X2 564 aa24.15■■□□□ 1.46
LINC00315-201ENST00000441947 KIF16BQ96L93 1317 aa24.15■■□□□ 1.46
LINC00315-201ENST00000441947 ATP7BP35670 1465 aa24.15■■□□□ 1.46
LINC00315-201ENST00000441947 TMEM57Q8N5G2 664 aa24.14■■□□□ 1.45
LINC00315-201ENST00000441947 FCHSD2O94868 740 aa24.13■■□□□ 1.45
LINC00315-201ENST00000441947 MAP2P11137 1827 aaKnown RBP24.13■■□□□ 1.45
LINC00315-201ENST00000441947 SMC5Q8IY18 1101 aa24.13■■□□□ 1.45
LINC00315-201ENST00000441947 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
LINC00315-201ENST00000441947 SLKQ9H2G2 1235 aaPredicted RBP24.13■■□□□ 1.45
LINC00315-201ENST00000441947 BRPF3Q9ULD4 1205 aa24.12■■□□□ 1.45
LINC00315-201ENST00000441947 ZBTB40Q9NUA8 1239 aa24.12■■□□□ 1.45
LINC00315-201ENST00000441947 ALDH1L2Q3SY69 923 aa24.11■■□□□ 1.45
LINC00315-201ENST00000441947 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
LINC00315-201ENST00000441947 PPIP5K1Q6PFW1 1433 aa24.11■■□□□ 1.45
LINC00315-201ENST00000441947 REREQ9P2R6 1566 aa24.1■■□□□ 1.45
LINC00315-201ENST00000441947 IPO8O15397 1037 aaKnown RBP24.1■■□□□ 1.45
LINC00315-201ENST00000441947 POLKQ9UBT6 870 aa24.1■■□□□ 1.45
LINC00315-201ENST00000441947 A2ML1A8K2U0 1454 aa24.09■■□□□ 1.45
LINC00315-201ENST00000441947 PRKAR2BP31323 418 aa24.08■■□□□ 1.45
LINC00315-201ENST00000441947 SPATA31D1Q6ZQQ2 1576 aa24.07■■□□□ 1.44
LINC00315-201ENST00000441947 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
LINC00315-201ENST00000441947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.07■■□□□ 1.44
LINC00315-201ENST00000441947 AGLP35573 1532 aa24.07■■□□□ 1.44
LINC00315-201ENST00000441947 BRPF1P55201 1214 aaPredicted RBP24.06■■□□□ 1.44
LINC00315-201ENST00000441947 RTN4Q9NQC3 1192 aaKnown RBP24.06■■□□□ 1.44
LINC00315-201ENST00000441947 MLECQ14165 292 aa24.05■■□□□ 1.44
LINC00315-201ENST00000441947 WAPLQ7Z5K2 1190 aa24.05■■□□□ 1.44
LINC00315-201ENST00000441947 C22orf23Q9BZE7 217 aa24.05■■□□□ 1.44
LINC00315-201ENST00000441947 RIMS2Q9UQ26 1411 aa24.05■■□□□ 1.44
LINC00315-201ENST00000441947 FBLN1P23142 703 aa24.05■■□□□ 1.44
LINC00315-201ENST00000441947 ZNF428Q96B54 188 aa24.05■■□□□ 1.44
LINC00315-201ENST00000441947 MFAP1P55081 439 aaKnown RBP24.04■■□□□ 1.44
LINC00315-201ENST00000441947 NRXN3Q9Y4C0 1643 aa24.04■■□□□ 1.44
LINC00315-201ENST00000441947 NFE2L2Q16236 605 aa24.03■■□□□ 1.44
LINC00315-201ENST00000441947 CPSF1Q10570 1443 aaKnown RBP24.03■■□□□ 1.44
LINC00315-201ENST00000441947 NUCB1Q02818 461 aa24.02■■□□□ 1.44
LINC00315-201ENST00000441947 CDK12Q9NYV4 1490 aaPredicted RBP24.02■■□□□ 1.44
LINC00315-201ENST00000441947 EDC4Q6P2E9 1401 aaKnown RBP24.02■■□□□ 1.44
LINC00315-201ENST00000441947 PHACTR3Q96KR7 559 aa24.01■■□□□ 1.43
LINC00315-201ENST00000441947 DLG5Q8TDM6 1919 aa24.01■■□□□ 1.43
LINC00315-201ENST00000441947 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
LINC00315-201ENST00000441947 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
LINC00315-201ENST00000441947 PIK3R4Q99570 1358 aa24■■□□□ 1.43
LINC00315-201ENST00000441947 MON2Q7Z3U7 1717 aa24■■□□□ 1.43
LINC00315-201ENST00000441947 HMOX1P09601 288 aa23.99■■□□□ 1.43
LINC00315-201ENST00000441947 VAMP4O75379 141 aa23.98■■□□□ 1.43
LINC00315-201ENST00000441947 IL13P35225 146 aa23.98■■□□□ 1.43
LINC00315-201ENST00000441947 MRPL50Q8N5N7 158 aaKnown RBP23.98■■□□□ 1.43
LINC00315-201ENST00000441947 EMILIN1Q9Y6C2 1016 aa23.98■■□□□ 1.43
LINC00315-201ENST00000441947 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms