RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 NME9Q86XW9 330 aa19.73■□□□□ 0.75
IFT140-204ENST00000439987 NKTRP30414 1462 aaKnown RBP19.73■□□□□ 0.75
IFT140-204ENST00000439987 ACEP12821 1306 aa19.73■□□□□ 0.75
IFT140-204ENST00000439987 COL3A1P02461 1466 aaPredicted RBP19.72■□□□□ 0.75
IFT140-204ENST00000439987 IRX6P78412 446 aaPredicted RBP19.72■□□□□ 0.75
IFT140-204ENST00000439987 NGEFQ8N5V2 710 aa19.71■□□□□ 0.75
IFT140-204ENST00000439987 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
IFT140-204ENST00000439987 NRKQ7Z2Y5 1582 aa19.7■□□□□ 0.74
IFT140-204ENST00000439987 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
IFT140-204ENST00000439987 USP6P35125 1406 aa19.69■□□□□ 0.74
IFT140-204ENST00000439987 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
IFT140-204ENST00000439987 RUNDC1Q96C34 613 aa19.69■□□□□ 0.74
IFT140-204ENST00000439987 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
IFT140-204ENST00000439987 COG3Q96JB2 828 aa19.69■□□□□ 0.74
IFT140-204ENST00000439987 ZRANB1Q9UGI0 708 aa19.68■□□□□ 0.74
IFT140-204ENST00000439987 TTC21BQ7Z4L5 1316 aa19.68■□□□□ 0.74
IFT140-204ENST00000439987 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
IFT140-204ENST00000439987 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.74
IFT140-204ENST00000439987 POLKQ9UBT6 870 aa19.68■□□□□ 0.74
IFT140-204ENST00000439987 RGPD8O14715 1765 aaPredicted RBP19.68■□□□□ 0.74
IFT140-204ENST00000439987 GOLGA2Q08379 1002 aa19.67■□□□□ 0.74
IFT140-204ENST00000439987 FMN2Q9NZ56 1722 aa19.67■□□□□ 0.74
IFT140-204ENST00000439987 AATKQ6ZMQ8 1374 aa19.66■□□□□ 0.74
IFT140-204ENST00000439987 MAP2P11137 1827 aaKnown RBP19.66■□□□□ 0.74
IFT140-204ENST00000439987 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
IFT140-204ENST00000439987 FBLN1P23142 703 aa19.66■□□□□ 0.74
IFT140-204ENST00000439987 RCAN3Q9UKA8 241 aa19.66■□□□□ 0.74
IFT140-204ENST00000439987 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
IFT140-204ENST00000439987 PMFBP1Q8TBY8 1022 aa19.65■□□□□ 0.74
IFT140-204ENST00000439987 SSH2Q76I76 1423 aa19.65■□□□□ 0.74
IFT140-204ENST00000439987 DIAPH1O60610 1272 aaKnown RBP19.65■□□□□ 0.74
IFT140-204ENST00000439987 TCP11L2Q8N4U5 519 aa19.64■□□□□ 0.73
IFT140-204ENST00000439987 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
IFT140-204ENST00000439987 NGDNQ8NEJ9 315 aaKnown RBP19.63■□□□□ 0.73
IFT140-204ENST00000439987 PPM1GO15355 546 aaPredicted RBP19.63■□□□□ 0.73
IFT140-204ENST00000439987 DUSP27Q5VZP5 1158 aa19.63■□□□□ 0.73
IFT140-204ENST00000439987 ADGRL3Q9HAR2 1447 aa19.62■□□□□ 0.73
IFT140-204ENST00000439987 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
IFT140-204ENST00000439987 EMILIN1Q9Y6C2 1016 aa19.62■□□□□ 0.73
IFT140-204ENST00000439987 OVOS2A0A0J9YW53 1432 aa19.62■□□□□ 0.73
IFT140-204ENST00000439987 OVOS2Q6IE36 1432 aa19.62■□□□□ 0.73
IFT140-204ENST00000439987 NWD1Q149M9 1564 aa19.62■□□□□ 0.73
IFT140-204ENST00000439987 TTC21AQ8NDW8 1320 aa19.61■□□□□ 0.73
IFT140-204ENST00000439987 RBM33Q96EV2 1170 aaKnown RBP19.61■□□□□ 0.73
IFT140-204ENST00000439987 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
IFT140-204ENST00000439987 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
IFT140-204ENST00000439987 TRMT2AQ8IZ69 625 aaKnown RBP19.6■□□□□ 0.73
IFT140-204ENST00000439987 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
IFT140-204ENST00000439987 PLEKHF1Q96S99 279 aa19.59■□□□□ 0.73
IFT140-204ENST00000439987 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
IFT140-204ENST00000439987 RRP7AQ9Y3A4 280 aaKnown RBP19.59■□□□□ 0.73
IFT140-204ENST00000439987 RRP1P56182 461 aaKnown RBP19.58■□□□□ 0.73
IFT140-204ENST00000439987 NEUROD2Q15784 382 aa19.58■□□□□ 0.73
IFT140-204ENST00000439987 E9PSI1 815 aa19.58■□□□□ 0.72
IFT140-204ENST00000439987 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.72
IFT140-204ENST00000439987 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
IFT140-204ENST00000439987 CCDC27Q2M243 656 aa19.57■□□□□ 0.72
IFT140-204ENST00000439987 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
IFT140-204ENST00000439987 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
IFT140-204ENST00000439987 USP31Q70CQ4 1352 aa19.56■□□□□ 0.72
IFT140-204ENST00000439987 PNNQ9H307 717 aaKnown RBP19.55■□□□□ 0.72
IFT140-204ENST00000439987 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
IFT140-204ENST00000439987 FCHSD2O94868 740 aa19.54■□□□□ 0.72
IFT140-204ENST00000439987 IL13P35225 146 aa19.54■□□□□ 0.72
IFT140-204ENST00000439987 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
IFT140-204ENST00000439987 PHF8Q9UPP1 1060 aa19.54■□□□□ 0.72
IFT140-204ENST00000439987 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
IFT140-204ENST00000439987 KDM4FA0A1W2PPD8 638 aa19.53■□□□□ 0.72
IFT140-204ENST00000439987 PIK3C2AO00443 1686 aa19.53■□□□□ 0.72
IFT140-204ENST00000439987 LRRC7Q96NW7 1537 aa19.52■□□□□ 0.72
IFT140-204ENST00000439987 PROSER2Q86WR7 435 aaPredicted RBP19.52■□□□□ 0.72
IFT140-204ENST00000439987 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.72
IFT140-204ENST00000439987 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
IFT140-204ENST00000439987 RSPH6AQ9H0K4 717 aa19.51■□□□□ 0.71
IFT140-204ENST00000439987 HSPA2P54652 639 aa19.5■□□□□ 0.71
IFT140-204ENST00000439987 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
IFT140-204ENST00000439987 PRKAR2BP31323 418 aa19.48■□□□□ 0.71
IFT140-204ENST00000439987 NLRP6P59044 892 aa19.47■□□□□ 0.71
IFT140-204ENST00000439987 PEAK1Q9H792 1746 aa19.47■□□□□ 0.71
IFT140-204ENST00000439987 HMOX1P09601 288 aa19.47■□□□□ 0.71
IFT140-204ENST00000439987 USP54Q70EL1 1684 aa19.47■□□□□ 0.71
IFT140-204ENST00000439987 SOX12O15370 315 aa19.46■□□□□ 0.71
IFT140-204ENST00000439987 NEFMP07197 916 aa19.46■□□□□ 0.71
IFT140-204ENST00000439987 TRIM35Q9UPQ4 493 aa19.46■□□□□ 0.71
IFT140-204ENST00000439987 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
IFT140-204ENST00000439987 EIF4A2Q14240 407 aaKnown RBP19.45■□□□□ 0.7
IFT140-204ENST00000439987 ABTB2Q8N961 1025 aa19.45■□□□□ 0.7
IFT140-204ENST00000439987 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
IFT140-204ENST00000439987 MAP3K19Q56UN5 1328 aa19.45■□□□□ 0.7
IFT140-204ENST00000439987 LMTK3Q96Q04 1460 aa19.45■□□□□ 0.7
IFT140-204ENST00000439987 PLIN1O60240 522 aa19.45■□□□□ 0.7
IFT140-204ENST00000439987 RIPK4P57078 832 aa19.45■□□□□ 0.7
IFT140-204ENST00000439987 MARF1Q9Y4F3 1742 aaKnown RBP19.45■□□□□ 0.7
IFT140-204ENST00000439987 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
IFT140-204ENST00000439987 B4GALNT3Q6L9W6 998 aa19.44■□□□□ 0.7
IFT140-204ENST00000439987 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
IFT140-204ENST00000439987 PSME1Q06323 249 aa19.43■□□□□ 0.7
IFT140-204ENST00000439987 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
IFT140-204ENST00000439987 MYH16Q9H6N6 1097 aa19.43■□□□□ 0.7
IFT140-204ENST00000439987 NUTM2GQ5VZR2 741 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms