RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 COL3A1P02461 1466 aaPredicted RBP15.62■□□□□ 0.09
HDAC8-214ENST00000439122 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
HDAC8-214ENST00000439122 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
HDAC8-214ENST00000439122 C8orf34Q49A92 452 aa15.61■□□□□ 0.09
HDAC8-214ENST00000439122 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
HDAC8-214ENST00000439122 TSR2Q969E8 191 aaKnown RBP15.61■□□□□ 0.09
HDAC8-214ENST00000439122 RLBP1P12271 317 aa15.6■□□□□ 0.09
HDAC8-214ENST00000439122 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
HDAC8-214ENST00000439122 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
HDAC8-214ENST00000439122 DDRGK1Q96HY6 314 aa15.6■□□□□ 0.09
HDAC8-214ENST00000439122 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
HDAC8-214ENST00000439122 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
HDAC8-214ENST00000439122 KIF20BQ96Q89 1820 aa15.58■□□□□ 0.08
HDAC8-214ENST00000439122 FBLN1P23142 703 aa15.57■□□□□ 0.08
HDAC8-214ENST00000439122 RIPK4P57078 832 aa15.57■□□□□ 0.08
HDAC8-214ENST00000439122 PNPLA6Q8IY17 1366 aa15.57■□□□□ 0.08
HDAC8-214ENST00000439122 AAMPQ13685 434 aa15.57■□□□□ 0.08
HDAC8-214ENST00000439122 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
HDAC8-214ENST00000439122 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
HDAC8-214ENST00000439122 EXOSC9Q06265 439 aaKnown RBP15.56■□□□□ 0.08
HDAC8-214ENST00000439122 RTL5Q5HYW3 569 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-214ENST00000439122 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC8-214ENST00000439122 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
HDAC8-214ENST00000439122 CT47B1P0C2W7 299 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-214ENST00000439122 TXNDC2Q86VQ3 553 aa15.56■□□□□ 0.08
HDAC8-214ENST00000439122 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
HDAC8-214ENST00000439122 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
HDAC8-214ENST00000439122 ATP7BP35670 1465 aa15.56■□□□□ 0.08
HDAC8-214ENST00000439122 ZKSCAN2Q63HK3 967 aa15.55■□□□□ 0.08
HDAC8-214ENST00000439122 FTSJ3Q8IY81 847 aaKnown RBP15.55■□□□□ 0.08
HDAC8-214ENST00000439122 SMC4Q9NTJ3 1288 aa15.55■□□□□ 0.08
HDAC8-214ENST00000439122 PCDHB15Q9Y5E8 787 aa15.55■□□□□ 0.08
HDAC8-214ENST00000439122 METP08581 1390 aa15.55■□□□□ 0.08
HDAC8-214ENST00000439122 WASLO00401 505 aaPredicted RBP15.55■□□□□ 0.08
HDAC8-214ENST00000439122 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
HDAC8-214ENST00000439122 FCHSD2O94868 740 aa15.53■□□□□ 0.08
HDAC8-214ENST00000439122 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
HDAC8-214ENST00000439122 DZIP1LQ8IYY4 767 aaKnown RBP15.53■□□□□ 0.08
HDAC8-214ENST00000439122 PPIP5K1Q6PFW1 1433 aa15.53■□□□□ 0.08
HDAC8-214ENST00000439122 NEFMP07197 916 aa15.52■□□□□ 0.08
HDAC8-214ENST00000439122 DAXXQ9UER7 740 aaPredicted RBP15.52■□□□□ 0.08
HDAC8-214ENST00000439122 IL16Q14005 1332 aa15.52■□□□□ 0.08
HDAC8-214ENST00000439122 NRXN3Q9Y4C0 1643 aa15.52■□□□□ 0.08
HDAC8-214ENST00000439122 PRKAR2BP31323 418 aa15.52■□□□□ 0.07
HDAC8-214ENST00000439122 DEKP35659 375 aaKnown RBP15.52■□□□□ 0.07
HDAC8-214ENST00000439122 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.07
HDAC8-214ENST00000439122 SSH1Q8WYL5 1049 aa15.51■□□□□ 0.07
HDAC8-214ENST00000439122 NME9Q86XW9 330 aa15.51■□□□□ 0.07
HDAC8-214ENST00000439122 NUDT16Q96DE0 195 aaKnown RBP15.51■□□□□ 0.07
HDAC8-214ENST00000439122 SLC4A3P48751 1232 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 RWDD1Q9H446 243 aaPredicted RBP15.5■□□□□ 0.07
HDAC8-214ENST00000439122 EDC4Q6P2E9 1401 aaKnown RBP15.5■□□□□ 0.07
HDAC8-214ENST00000439122 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 HMOX1P09601 288 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 TRIM27P14373 513 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 MAP2P11137 1827 aaKnown RBP15.5■□□□□ 0.07
HDAC8-214ENST00000439122 LRRC7Q96NW7 1537 aa15.5■□□□□ 0.07
HDAC8-214ENST00000439122 CPSF1Q10570 1443 aaKnown RBP15.5■□□□□ 0.07
HDAC8-214ENST00000439122 KIF13AQ9H1H9 1805 aa15.49■□□□□ 0.07
HDAC8-214ENST00000439122 ZRANB1Q9UGI0 708 aa15.49■□□□□ 0.07
HDAC8-214ENST00000439122 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
HDAC8-214ENST00000439122 TNRQ92752 1358 aa15.48■□□□□ 0.07
HDAC8-214ENST00000439122 ATF7IPQ6VMQ6 1270 aa15.48■□□□□ 0.07
HDAC8-214ENST00000439122 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
HDAC8-214ENST00000439122 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
HDAC8-214ENST00000439122 ITPRIPQ8IWB1 547 aa15.48■□□□□ 0.07
HDAC8-214ENST00000439122 FAM135BQ49AJ0 1406 aa15.47■□□□□ 0.07
HDAC8-214ENST00000439122 COG3Q96JB2 828 aa15.47■□□□□ 0.07
HDAC8-214ENST00000439122 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
HDAC8-214ENST00000439122 PDZRN3Q9UPQ7 1066 aa15.47■□□□□ 0.07
HDAC8-214ENST00000439122 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
HDAC8-214ENST00000439122 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
HDAC8-214ENST00000439122 TMEM2Q9UHN6 1383 aa15.45■□□□□ 0.06
HDAC8-214ENST00000439122 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
HDAC8-214ENST00000439122 IL13P35225 146 aa15.45■□□□□ 0.06
HDAC8-214ENST00000439122 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
HDAC8-214ENST00000439122 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
HDAC8-214ENST00000439122 TECPR2O15040 1411 aa15.45■□□□□ 0.06
HDAC8-214ENST00000439122 KIF16BQ96L93 1317 aa15.44■□□□□ 0.06
HDAC8-214ENST00000439122 IPO8O15397 1037 aaKnown RBP15.44■□□□□ 0.06
HDAC8-214ENST00000439122 SEC24BO95487 1268 aa15.44■□□□□ 0.06
HDAC8-214ENST00000439122 THUMPD2Q9BTF0 503 aaKnown RBP15.44■□□□□ 0.06
HDAC8-214ENST00000439122 KNDC1Q76NI1 1749 aa15.44■□□□□ 0.06
HDAC8-214ENST00000439122 TMEM57Q8N5G2 664 aa15.43■□□□□ 0.06
HDAC8-214ENST00000439122 AATKQ6ZMQ8 1374 aa15.43■□□□□ 0.06
HDAC8-214ENST00000439122 USP35Q9P2H5 1018 aa15.43■□□□□ 0.06
HDAC8-214ENST00000439122 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-214ENST00000439122 CPS1P31327 1500 aa15.42■□□□□ 0.06
HDAC8-214ENST00000439122 ALDH1L2Q3SY69 923 aa15.42■□□□□ 0.06
HDAC8-214ENST00000439122 ZNF692Q9BU19 519 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-214ENST00000439122 PRR36Q9H6K5 1346 aa15.42■□□□□ 0.06
HDAC8-214ENST00000439122 ROBO2Q9HCK4 1378 aa15.42■□□□□ 0.06
HDAC8-214ENST00000439122 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
HDAC8-214ENST00000439122 UBR1Q8IWV7 1749 aa15.41■□□□□ 0.06
HDAC8-214ENST00000439122 USP19O94966 1318 aa15.41■□□□□ 0.06
HDAC8-214ENST00000439122 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
HDAC8-214ENST00000439122 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
HDAC8-214ENST00000439122 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms