RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
LINC00163-202ENST00000439088 CHD2O14647 1828 aaKnown RBP19.81■□□□□ 0.76
LINC00163-202ENST00000439088 NME9Q86XW9 330 aa19.81■□□□□ 0.76
LINC00163-202ENST00000439088 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
LINC00163-202ENST00000439088 COL3A1P02461 1466 aaPredicted RBP19.8■□□□□ 0.76
LINC00163-202ENST00000439088 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
LINC00163-202ENST00000439088 NPHP4O75161 1426 aaPredicted RBP19.79■□□□□ 0.76
LINC00163-202ENST00000439088 U2AF1L5P0DN76 240 aaPredicted RBP19.78■□□□□ 0.76
LINC00163-202ENST00000439088 U2AF1Q01081 240 aaKnown RBP eCLIP19.78■□□□□ 0.76
LINC00163-202ENST00000439088 COG3Q96JB2 828 aa19.78■□□□□ 0.76
LINC00163-202ENST00000439088 POLKQ9UBT6 870 aa19.78■□□□□ 0.76
LINC00163-202ENST00000439088 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
LINC00163-202ENST00000439088 TTC21BQ7Z4L5 1316 aa19.77■□□□□ 0.76
LINC00163-202ENST00000439088 AATKQ6ZMQ8 1374 aa19.77■□□□□ 0.76
LINC00163-202ENST00000439088 SLFN5Q08AF3 891 aa19.76■□□□□ 0.75
LINC00163-202ENST00000439088 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
LINC00163-202ENST00000439088 NKTRP30414 1462 aaKnown RBP19.76■□□□□ 0.75
LINC00163-202ENST00000439088 DIAPH1O60610 1272 aaKnown RBP19.76■□□□□ 0.75
LINC00163-202ENST00000439088 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
LINC00163-202ENST00000439088 TRMT2AQ8IZ69 625 aaKnown RBP19.76■□□□□ 0.75
LINC00163-202ENST00000439088 ZRANB1Q9UGI0 708 aa19.76■□□□□ 0.75
LINC00163-202ENST00000439088 USP6P35125 1406 aa19.76■□□□□ 0.75
LINC00163-202ENST00000439088 TCP11L2Q8N4U5 519 aa19.75■□□□□ 0.75
LINC00163-202ENST00000439088 PPP4R2Q9NY27 417 aa19.75■□□□□ 0.75
LINC00163-202ENST00000439088 NRKQ7Z2Y5 1582 aa19.74■□□□□ 0.75
LINC00163-202ENST00000439088 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
LINC00163-202ENST00000439088 MAP2P11137 1827 aaKnown RBP19.73■□□□□ 0.75
LINC00163-202ENST00000439088 SSH2Q76I76 1423 aa19.73■□□□□ 0.75
LINC00163-202ENST00000439088 U2SURPO15042 1029 aaKnown RBP19.73■□□□□ 0.75
LINC00163-202ENST00000439088 FBLN1P23142 703 aa19.73■□□□□ 0.75
LINC00163-202ENST00000439088 WWC1Q8IX03 1113 aa19.73■□□□□ 0.75
LINC00163-202ENST00000439088 E9PSI1 815 aa19.72■□□□□ 0.75
LINC00163-202ENST00000439088 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
LINC00163-202ENST00000439088 CCDC27Q2M243 656 aa19.72■□□□□ 0.75
LINC00163-202ENST00000439088 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
LINC00163-202ENST00000439088 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
LINC00163-202ENST00000439088 TTC21AQ8NDW8 1320 aa19.71■□□□□ 0.75
LINC00163-202ENST00000439088 NGDNQ8NEJ9 315 aaKnown RBP19.71■□□□□ 0.75
LINC00163-202ENST00000439088 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
LINC00163-202ENST00000439088 FMN2Q9NZ56 1722 aa19.71■□□□□ 0.75
LINC00163-202ENST00000439088 RGPD8O14715 1765 aaPredicted RBP19.7■□□□□ 0.74
LINC00163-202ENST00000439088 PPM1GO15355 546 aaPredicted RBP19.7■□□□□ 0.74
LINC00163-202ENST00000439088 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
LINC00163-202ENST00000439088 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
LINC00163-202ENST00000439088 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
LINC00163-202ENST00000439088 CDK12Q9NYV4 1490 aaPredicted RBP19.68■□□□□ 0.74
LINC00163-202ENST00000439088 NEUROD2Q15784 382 aa19.68■□□□□ 0.74
LINC00163-202ENST00000439088 WDR63Q8IWG1 891 aa19.68■□□□□ 0.74
LINC00163-202ENST00000439088 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
LINC00163-202ENST00000439088 OVOS2A0A0J9YW53 1432 aa19.68■□□□□ 0.74
LINC00163-202ENST00000439088 OVOS2Q6IE36 1432 aa19.68■□□□□ 0.74
LINC00163-202ENST00000439088 FCHSD2O94868 740 aa19.67■□□□□ 0.74
LINC00163-202ENST00000439088 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
LINC00163-202ENST00000439088 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
LINC00163-202ENST00000439088 ADGRL3Q9HAR2 1447 aa19.66■□□□□ 0.74
LINC00163-202ENST00000439088 USP31Q70CQ4 1352 aa19.65■□□□□ 0.74
LINC00163-202ENST00000439088 IL13P35225 146 aa19.65■□□□□ 0.74
LINC00163-202ENST00000439088 RRS1Q15050 365 aaKnown RBP19.64■□□□□ 0.74
LINC00163-202ENST00000439088 NWD1Q149M9 1564 aa19.64■□□□□ 0.73
LINC00163-202ENST00000439088 MAPK8IP3Q9UPT6 1336 aa19.64■□□□□ 0.73
LINC00163-202ENST00000439088 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
LINC00163-202ENST00000439088 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
LINC00163-202ENST00000439088 RSPH6AQ9H0K4 717 aa19.61■□□□□ 0.73
LINC00163-202ENST00000439088 PHF8Q9UPP1 1060 aa19.61■□□□□ 0.73
LINC00163-202ENST00000439088 NEFMP07197 916 aa19.59■□□□□ 0.73
LINC00163-202ENST00000439088 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
LINC00163-202ENST00000439088 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
LINC00163-202ENST00000439088 PRKAR2BP31323 418 aa19.58■□□□□ 0.72
LINC00163-202ENST00000439088 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.72
LINC00163-202ENST00000439088 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
LINC00163-202ENST00000439088 LRRC7Q96NW7 1537 aa19.57■□□□□ 0.72
LINC00163-202ENST00000439088 PLIN1O60240 522 aa19.57■□□□□ 0.72
LINC00163-202ENST00000439088 RIPK4P57078 832 aa19.57■□□□□ 0.72
LINC00163-202ENST00000439088 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
LINC00163-202ENST00000439088 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
LINC00163-202ENST00000439088 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
LINC00163-202ENST00000439088 HMOX1P09601 288 aa19.55■□□□□ 0.72
LINC00163-202ENST00000439088 NLRP6P59044 892 aa19.55■□□□□ 0.72
LINC00163-202ENST00000439088 ESCO1Q5FWF5 840 aa19.55■□□□□ 0.72
LINC00163-202ENST00000439088 IL16Q14005 1332 aa19.54■□□□□ 0.72
LINC00163-202ENST00000439088 KDM4FA0A1W2PPD8 638 aa19.54■□□□□ 0.72
LINC00163-202ENST00000439088 EIF4A2Q14240 407 aaKnown RBP19.54■□□□□ 0.72
LINC00163-202ENST00000439088 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
LINC00163-202ENST00000439088 ABTB2Q8N961 1025 aa19.54■□□□□ 0.72
LINC00163-202ENST00000439088 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
LINC00163-202ENST00000439088 MAP3K19Q56UN5 1328 aa19.53■□□□□ 0.72
LINC00163-202ENST00000439088 USP54Q70EL1 1684 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.72
LINC00163-202ENST00000439088 CCDC136Q96JN2 1154 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 PEAK1Q9H792 1746 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 PSME1Q06323 249 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 NFE2L2Q16236 605 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.72
LINC00163-202ENST00000439088 SBNO1A3KN83 1393 aa19.52■□□□□ 0.71
LINC00163-202ENST00000439088 SOX12O15370 315 aa19.51■□□□□ 0.71
LINC00163-202ENST00000439088 HSPA2P54652 639 aa19.51■□□□□ 0.71
LINC00163-202ENST00000439088 FLT4P35916 1363 aa19.5■□□□□ 0.71
LINC00163-202ENST00000439088 NCOA3Q9Y6Q9 1424 aa19.5■□□□□ 0.71
LINC00163-202ENST00000439088 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms