RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
LSMEM1-202ENST00000439068 KIF15Q9NS87 1388 aa13.58□□□□□ -0.23
LSMEM1-202ENST00000439068 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.23
LSMEM1-202ENST00000439068 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.23
LSMEM1-202ENST00000439068 GNPATO15228 680 aa13.58□□□□□ -0.24
LSMEM1-202ENST00000439068 FCHSD2O94868 740 aa13.58□□□□□ -0.24
LSMEM1-202ENST00000439068 IDI1Q13907 227 aa13.58□□□□□ -0.24
LSMEM1-202ENST00000439068 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
LSMEM1-202ENST00000439068 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 CFAP65Q6ZU64 1925 aaKnown RBP13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 ARHGAP23Q9P227 1491 aa13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 SLIT1O75093 1534 aa13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 TMEM94Q12767 1356 aa13.57□□□□□ -0.24
LSMEM1-202ENST00000439068 PDE4DQ08499 809 aa13.56□□□□□ -0.24
LSMEM1-202ENST00000439068 POTEAQ6S8J7 498 aa13.56□□□□□ -0.24
LSMEM1-202ENST00000439068 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
LSMEM1-202ENST00000439068 SLC52A1Q9NWF4 448 aa13.56□□□□□ -0.24
LSMEM1-202ENST00000439068 PCDHGA10Q9Y5H3 936 aa13.56□□□□□ -0.24
LSMEM1-202ENST00000439068 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
LSMEM1-202ENST00000439068 CCDC102AQ96A19 550 aa13.55□□□□□ -0.24
LSMEM1-202ENST00000439068 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
LSMEM1-202ENST00000439068 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
LSMEM1-202ENST00000439068 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
LSMEM1-202ENST00000439068 ERBINQ96RT1 1412 aa13.55□□□□□ -0.24
LSMEM1-202ENST00000439068 UBR1Q8IWV7 1749 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 IRF6O14896 467 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 PHF14O94880 888 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 MAP2K5Q13163 448 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 PTGDRQ13258 359 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 HIC1Q14526 733 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 MSH6P52701 1360 aa13.54□□□□□ -0.24
LSMEM1-202ENST00000439068 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
LSMEM1-202ENST00000439068 MAP3K7O43318 606 aa13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 PPP1R15AO75807 674 aaPredicted RBP13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 KDM4CQ9H3R0 1056 aa13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 MAP3K1Q13233 1512 aa13.52□□□□□ -0.25
LSMEM1-202ENST00000439068 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
LSMEM1-202ENST00000439068 TSR1Q2NL82 804 aaKnown RBP13.51□□□□□ -0.25
LSMEM1-202ENST00000439068 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
LSMEM1-202ENST00000439068 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
LSMEM1-202ENST00000439068 EPAS1Q99814 870 aa13.51□□□□□ -0.25
LSMEM1-202ENST00000439068 NPDC1Q9NQX5 325 aaPredicted RBP13.51□□□□□ -0.25
LSMEM1-202ENST00000439068 CEP152O94986 1710 aa13.5□□□□□ -0.25
LSMEM1-202ENST00000439068 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
LSMEM1-202ENST00000439068 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 ABCC5O15440 1437 aa13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 JCADQ9P266 1359 aa13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 NUDT7P0C024 238 aa13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 MEX3CQ5U5Q3 659 aaKnown RBP13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 TIMELESSQ9UNS1 1208 aa13.49□□□□□ -0.25
LSMEM1-202ENST00000439068 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
LSMEM1-202ENST00000439068 TYW1BQ6NUM6 668 aa13.48□□□□□ -0.25
LSMEM1-202ENST00000439068 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
LSMEM1-202ENST00000439068 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
LSMEM1-202ENST00000439068 ATF3P18847 181 aa13.46□□□□□ -0.25
LSMEM1-202ENST00000439068 FOSBP53539 338 aa13.46□□□□□ -0.25
LSMEM1-202ENST00000439068 TBX22Q9Y458 520 aa13.46□□□□□ -0.25
LSMEM1-202ENST00000439068 DAPK1P53355 1430 aa13.46□□□□□ -0.26
LSMEM1-202ENST00000439068 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
LSMEM1-202ENST00000439068 SPATA31A6Q5VVP1 1343 aa13.45□□□□□ -0.26
LSMEM1-202ENST00000439068 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
LSMEM1-202ENST00000439068 DOK7Q18PE1 504 aa13.44□□□□□ -0.26
LSMEM1-202ENST00000439068 C19orf44Q9H6X5 657 aa13.44□□□□□ -0.26
LSMEM1-202ENST00000439068 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
LSMEM1-202ENST00000439068 TET3O43151 1660 aa13.44□□□□□ -0.26
LSMEM1-202ENST00000439068 KDM5AP29375 1690 aaKnown RBP13.44□□□□□ -0.26
LSMEM1-202ENST00000439068 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
LSMEM1-202ENST00000439068 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
LSMEM1-202ENST00000439068 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
LSMEM1-202ENST00000439068 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
LSMEM1-202ENST00000439068 NCOA3Q9Y6Q9 1424 aa13.43□□□□□ -0.26
LSMEM1-202ENST00000439068 XIRP1Q702N8 1843 aaKnown RBP13.43□□□□□ -0.26
LSMEM1-202ENST00000439068 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
LSMEM1-202ENST00000439068 NOS1P29475 1434 aa13.42□□□□□ -0.26
LSMEM1-202ENST00000439068 RXRBP28702 533 aa13.41□□□□□ -0.26
LSMEM1-202ENST00000439068 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
LSMEM1-202ENST00000439068 PARP9Q8IXQ6 854 aa13.41□□□□□ -0.26
LSMEM1-202ENST00000439068 PTPN23Q9H3S7 1636 aa13.41□□□□□ -0.26
LSMEM1-202ENST00000439068 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
LSMEM1-202ENST00000439068 AMHR2Q16671 573 aa13.4□□□□□ -0.26
LSMEM1-202ENST00000439068 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
LSMEM1-202ENST00000439068 FAM117AQ9C073 453 aa13.4□□□□□ -0.26
LSMEM1-202ENST00000439068 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
LSMEM1-202ENST00000439068 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
LSMEM1-202ENST00000439068 TRIM52Q96A61 297 aa13.39□□□□□ -0.27
LSMEM1-202ENST00000439068 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
LSMEM1-202ENST00000439068 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
LSMEM1-202ENST00000439068 C6orf132Q5T0Z8 1188 aa13.38□□□□□ -0.27
LSMEM1-202ENST00000439068 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
LSMEM1-202ENST00000439068 ZDHHC16Q969W1 377 aa13.38□□□□□ -0.27
LSMEM1-202ENST00000439068 ADGRB3O60242 1522 aa13.38□□□□□ -0.27
LSMEM1-202ENST00000439068 PIK3R4Q99570 1358 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms