RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 APAF1O14727 1248 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 MTHFSP49914 203 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 CCDC61Q9Y6R9 512 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 CPSF1Q10570 1443 aaKnown RBP18.18■□□□□ 0.5
PTCHD3-201ENST00000438700 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
PTCHD3-201ENST00000438700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTCHD3-201ENST00000438700 ITSN1Q15811 1721 aa18.17■□□□□ 0.5
PTCHD3-201ENST00000438700 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
PTCHD3-201ENST00000438700 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
PTCHD3-201ENST00000438700 IPO9Q96P70 1041 aaKnown RBP18.16■□□□□ 0.5
PTCHD3-201ENST00000438700 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
PTCHD3-201ENST00000438700 MON2Q7Z3U7 1717 aa18.16■□□□□ 0.5
PTCHD3-201ENST00000438700 AKAP12Q02952 1782 aa18.16■□□□□ 0.5
PTCHD3-201ENST00000438700 PIK3R4Q99570 1358 aa18.16■□□□□ 0.5
PTCHD3-201ENST00000438700 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
PTCHD3-201ENST00000438700 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
PTCHD3-201ENST00000438700 KCNA6P17658 529 aa18.15■□□□□ 0.5
PTCHD3-201ENST00000438700 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
PTCHD3-201ENST00000438700 ANP32AP39687 249 aaKnown RBP18.14■□□□□ 0.49
PTCHD3-201ENST00000438700 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
PTCHD3-201ENST00000438700 CHD2O14647 1828 aaKnown RBP18.13■□□□□ 0.49
PTCHD3-201ENST00000438700 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
PTCHD3-201ENST00000438700 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
PTCHD3-201ENST00000438700 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
PTCHD3-201ENST00000438700 NKTRP30414 1462 aaKnown RBP18.11■□□□□ 0.49
PTCHD3-201ENST00000438700 NME9Q86XW9 330 aa18.1■□□□□ 0.49
PTCHD3-201ENST00000438700 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
PTCHD3-201ENST00000438700 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
PTCHD3-201ENST00000438700 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
PTCHD3-201ENST00000438700 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.49
PTCHD3-201ENST00000438700 ACEP12821 1306 aa18.08■□□□□ 0.48
PTCHD3-201ENST00000438700 NRKQ7Z2Y5 1582 aa18.08■□□□□ 0.48
PTCHD3-201ENST00000438700 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
PTCHD3-201ENST00000438700 PLEKHG3A1L390 1219 aa18.07■□□□□ 0.48
PTCHD3-201ENST00000438700 NEUROD2Q15784 382 aa18.07■□□□□ 0.48
PTCHD3-201ENST00000438700 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
PTCHD3-201ENST00000438700 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
PTCHD3-201ENST00000438700 TRMT2AQ8IZ69 625 aaKnown RBP18.06■□□□□ 0.48
PTCHD3-201ENST00000438700 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
PTCHD3-201ENST00000438700 MAP2P11137 1827 aaKnown RBP18.06■□□□□ 0.48
PTCHD3-201ENST00000438700 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
PTCHD3-201ENST00000438700 FBLN1P23142 703 aa18.05■□□□□ 0.48
PTCHD3-201ENST00000438700 RTL5Q5HYW3 569 aaPredicted RBP18.05■□□□□ 0.48
PTCHD3-201ENST00000438700 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
PTCHD3-201ENST00000438700 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
PTCHD3-201ENST00000438700 USP6P35125 1406 aa18.04■□□□□ 0.48
PTCHD3-201ENST00000438700 E9PSI1 815 aa18.04■□□□□ 0.48
PTCHD3-201ENST00000438700 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
PTCHD3-201ENST00000438700 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTCHD3-201ENST00000438700 IL27Q8NEV9 243 aa18.04■□□□□ 0.48
PTCHD3-201ENST00000438700 PMFBP1Q8TBY8 1022 aa18.03■□□□□ 0.48
PTCHD3-201ENST00000438700 BCAR3O75815 825 aa18.03■□□□□ 0.48
PTCHD3-201ENST00000438700 TTC21BQ7Z4L5 1316 aa18.03■□□□□ 0.48
PTCHD3-201ENST00000438700 WWC1Q8IX03 1113 aa18.03■□□□□ 0.48
PTCHD3-201ENST00000438700 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
PTCHD3-201ENST00000438700 COG3Q96JB2 828 aa18.03■□□□□ 0.48
PTCHD3-201ENST00000438700 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
PTCHD3-201ENST00000438700 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
PTCHD3-201ENST00000438700 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.48
PTCHD3-201ENST00000438700 POLKQ9UBT6 870 aa18.02■□□□□ 0.48
PTCHD3-201ENST00000438700 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
PTCHD3-201ENST00000438700 IQSEC2Q5JU85 1478 aa18.02■□□□□ 0.47
PTCHD3-201ENST00000438700 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.47
PTCHD3-201ENST00000438700 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
PTCHD3-201ENST00000438700 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
PTCHD3-201ENST00000438700 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
PTCHD3-201ENST00000438700 RTN4Q9NQC3 1192 aaKnown RBP18.01■□□□□ 0.47
PTCHD3-201ENST00000438700 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
PTCHD3-201ENST00000438700 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
PTCHD3-201ENST00000438700 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
PTCHD3-201ENST00000438700 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
PTCHD3-201ENST00000438700 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
PTCHD3-201ENST00000438700 SSH2Q76I76 1423 aa17.99■□□□□ 0.47
PTCHD3-201ENST00000438700 AATKQ6ZMQ8 1374 aa17.98■□□□□ 0.47
PTCHD3-201ENST00000438700 PDE4AP27815 886 aa17.98■□□□□ 0.47
PTCHD3-201ENST00000438700 NWD1Q149M9 1564 aa17.97■□□□□ 0.47
PTCHD3-201ENST00000438700 OVOS2A0A0J9YW53 1432 aa17.97■□□□□ 0.47
PTCHD3-201ENST00000438700 OVOS2Q6IE36 1432 aa17.97■□□□□ 0.47
PTCHD3-201ENST00000438700 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
PTCHD3-201ENST00000438700 CDK12Q9NYV4 1490 aaPredicted RBP17.97■□□□□ 0.47
PTCHD3-201ENST00000438700 KDM4FA0A1W2PPD8 638 aa17.96■□□□□ 0.47
PTCHD3-201ENST00000438700 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
PTCHD3-201ENST00000438700 PRKCSHP14314 528 aaPredicted RBP17.96■□□□□ 0.47
PTCHD3-201ENST00000438700 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
PTCHD3-201ENST00000438700 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
PTCHD3-201ENST00000438700 NEFMP07197 916 aa17.93■□□□□ 0.46
PTCHD3-201ENST00000438700 MS4A1P11836 297 aa17.93■□□□□ 0.46
PTCHD3-201ENST00000438700 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
PTCHD3-201ENST00000438700 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
PTCHD3-201ENST00000438700 BACH2Q9BYV9 841 aa17.93■□□□□ 0.46
PTCHD3-201ENST00000438700 PIK3C2AO00443 1686 aa17.92■□□□□ 0.46
PTCHD3-201ENST00000438700 CENPQQ7L2Z9 268 aaPredicted RBP17.92■□□□□ 0.46
PTCHD3-201ENST00000438700 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-201ENST00000438700 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
PTCHD3-201ENST00000438700 HSPA2P54652 639 aa17.91■□□□□ 0.46
PTCHD3-201ENST00000438700 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3-201ENST00000438700 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
PTCHD3-201ENST00000438700 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
PTCHD3-201ENST00000438700 USP31Q70CQ4 1352 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms