RNA–Protein interactions for RNA: ENST00000438282.6

CNTN4-209, Transcript of contactin 4, humanhuman

TSL 5

Gene CNTN4, Length 2,463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-209ENST00000438282 MAP2P11137 1827 aaKnown RBP13.65□□□□□ -0.22
CNTN4-209ENST00000438282 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
CNTN4-209ENST00000438282 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
CNTN4-209ENST00000438282 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.23
CNTN4-209ENST00000438282 SLFN5Q08AF3 891 aa13.64□□□□□ -0.23
CNTN4-209ENST00000438282 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
CNTN4-209ENST00000438282 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
CNTN4-209ENST00000438282 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
CNTN4-209ENST00000438282 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
CNTN4-209ENST00000438282 NKTRP30414 1462 aaKnown RBP13.62□□□□□ -0.23
CNTN4-209ENST00000438282 NME9Q86XW9 330 aa13.62□□□□□ -0.23
CNTN4-209ENST00000438282 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
CNTN4-209ENST00000438282 E9PSI1 815 aa13.61□□□□□ -0.23
CNTN4-209ENST00000438282 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
CNTN4-209ENST00000438282 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
CNTN4-209ENST00000438282 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
CNTN4-209ENST00000438282 NEUROD2Q15784 382 aa13.61□□□□□ -0.23
CNTN4-209ENST00000438282 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
CNTN4-209ENST00000438282 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
CNTN4-209ENST00000438282 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
CNTN4-209ENST00000438282 WWC1Q8IX03 1113 aa13.59□□□□□ -0.23
CNTN4-209ENST00000438282 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
CNTN4-209ENST00000438282 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
CNTN4-209ENST00000438282 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
CNTN4-209ENST00000438282 PNPLA6Q8IY17 1366 aa13.59□□□□□ -0.23
CNTN4-209ENST00000438282 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
CNTN4-209ENST00000438282 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
CNTN4-209ENST00000438282 EXOC6Q8TAG9 804 aa13.59□□□□□ -0.23
CNTN4-209ENST00000438282 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
CNTN4-209ENST00000438282 PLIN1O60240 522 aa13.58□□□□□ -0.23
CNTN4-209ENST00000438282 PIK3R4Q99570 1358 aa13.58□□□□□ -0.24
CNTN4-209ENST00000438282 COG3Q96JB2 828 aa13.58□□□□□ -0.24
CNTN4-209ENST00000438282 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
CNTN4-209ENST00000438282 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
CNTN4-209ENST00000438282 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
CNTN4-209ENST00000438282 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
CNTN4-209ENST00000438282 ACEP12821 1306 aa13.57□□□□□ -0.24
CNTN4-209ENST00000438282 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
CNTN4-209ENST00000438282 FBLN1P23142 703 aa13.57□□□□□ -0.24
CNTN4-209ENST00000438282 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
CNTN4-209ENST00000438282 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
CNTN4-209ENST00000438282 USP6P35125 1406 aa13.57□□□□□ -0.24
CNTN4-209ENST00000438282 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
CNTN4-209ENST00000438282 KCNA4P22459 653 aa13.56□□□□□ -0.24
CNTN4-209ENST00000438282 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
CNTN4-209ENST00000438282 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
CNTN4-209ENST00000438282 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
CNTN4-209ENST00000438282 KCNA6P17658 529 aa13.55□□□□□ -0.24
CNTN4-209ENST00000438282 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
CNTN4-209ENST00000438282 EMILIN1Q9Y6C2 1016 aa13.55□□□□□ -0.24
CNTN4-209ENST00000438282 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
CNTN4-209ENST00000438282 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
CNTN4-209ENST00000438282 WDR63Q8IWG1 891 aa13.54□□□□□ -0.24
CNTN4-209ENST00000438282 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
CNTN4-209ENST00000438282 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
CNTN4-209ENST00000438282 CRBNQ96SW2 442 aa13.54□□□□□ -0.24
CNTN4-209ENST00000438282 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
CNTN4-209ENST00000438282 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
CNTN4-209ENST00000438282 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
CNTN4-209ENST00000438282 ANKARQ7Z5J8 1434 aa13.53□□□□□ -0.24
CNTN4-209ENST00000438282 TMPOP42166 694 aaKnown RBP13.52□□□□□ -0.25
CNTN4-209ENST00000438282 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.25
CNTN4-209ENST00000438282 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
CNTN4-209ENST00000438282 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
CNTN4-209ENST00000438282 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
CNTN4-209ENST00000438282 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
CNTN4-209ENST00000438282 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
CNTN4-209ENST00000438282 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
CNTN4-209ENST00000438282 FCHSD2O94868 740 aa13.5□□□□□ -0.25
CNTN4-209ENST00000438282 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
CNTN4-209ENST00000438282 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
CNTN4-209ENST00000438282 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
CNTN4-209ENST00000438282 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
CNTN4-209ENST00000438282 NEFMP07197 916 aa13.49□□□□□ -0.25
CNTN4-209ENST00000438282 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
CNTN4-209ENST00000438282 BCAR3O75815 825 aa13.49□□□□□ -0.25
CNTN4-209ENST00000438282 IL13P35225 146 aa13.49□□□□□ -0.25
CNTN4-209ENST00000438282 HMOX1P09601 288 aa13.48□□□□□ -0.25
CNTN4-209ENST00000438282 RIPK4P57078 832 aa13.48□□□□□ -0.25
CNTN4-209ENST00000438282 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
CNTN4-209ENST00000438282 DLG5Q8TDM6 1919 aa13.47□□□□□ -0.25
CNTN4-209ENST00000438282 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
CNTN4-209ENST00000438282 NWD1Q149M9 1564 aa13.47□□□□□ -0.25
CNTN4-209ENST00000438282 USP54Q70EL1 1684 aa13.46□□□□□ -0.25
CNTN4-209ENST00000438282 MARF1Q9Y4F3 1742 aaKnown RBP13.46□□□□□ -0.25
CNTN4-209ENST00000438282 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.25
CNTN4-209ENST00000438282 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.26
CNTN4-209ENST00000438282 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
CNTN4-209ENST00000438282 SOX12O15370 315 aa13.45□□□□□ -0.26
CNTN4-209ENST00000438282 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
CNTN4-209ENST00000438282 IL16Q14005 1332 aa13.44□□□□□ -0.26
CNTN4-209ENST00000438282 RGPD1P0DJD0 1748 aa13.44□□□□□ -0.26
CNTN4-209ENST00000438282 TSR2Q969E8 191 aaKnown RBP13.44□□□□□ -0.26
CNTN4-209ENST00000438282 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
CNTN4-209ENST00000438282 NFE2L2Q16236 605 aa13.44□□□□□ -0.26
CNTN4-209ENST00000438282 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
CNTN4-209ENST00000438282 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
CNTN4-209ENST00000438282 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
CNTN4-209ENST00000438282 EXOSC9Q06265 439 aaKnown RBP13.41□□□□□ -0.26
CNTN4-209ENST00000438282 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms