RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 ZNF335Q9H4Z2 1342 aaPredicted RBP13.41□□□□□ -0.26
CUBN-204ENST00000438254 LRRC7Q96NW7 1537 aa13.41□□□□□ -0.26
CUBN-204ENST00000438254 ANKARQ7Z5J8 1434 aa13.4□□□□□ -0.26
CUBN-204ENST00000438254 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
CUBN-204ENST00000438254 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
CUBN-204ENST00000438254 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
CUBN-204ENST00000438254 DCCP43146 1447 aa13.39□□□□□ -0.27
CUBN-204ENST00000438254 LTBP4Q8N2S1 1624 aa13.39□□□□□ -0.27
CUBN-204ENST00000438254 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
CUBN-204ENST00000438254 RBM33Q96EV2 1170 aaKnown RBP13.39□□□□□ -0.27
CUBN-204ENST00000438254 SLC12A5Q9H2X9 1139 aa13.39□□□□□ -0.27
CUBN-204ENST00000438254 PANK3Q9H999 370 aa13.39□□□□□ -0.27
CUBN-204ENST00000438254 ANKRD36BQ8N2N9 1353 aa13.39□□□□□ -0.27
CUBN-204ENST00000438254 NUDT16Q96DE0 195 aaKnown RBP13.38□□□□□ -0.27
CUBN-204ENST00000438254 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
CUBN-204ENST00000438254 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
CUBN-204ENST00000438254 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
CUBN-204ENST00000438254 PPIP5K1Q6PFW1 1433 aa13.37□□□□□ -0.27
CUBN-204ENST00000438254 ITSN1Q15811 1721 aa13.36□□□□□ -0.27
CUBN-204ENST00000438254 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
CUBN-204ENST00000438254 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
CUBN-204ENST00000438254 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
CUBN-204ENST00000438254 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
CUBN-204ENST00000438254 NPC1L1Q9UHC9 1359 aa13.35□□□□□ -0.27
CUBN-204ENST00000438254 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
CUBN-204ENST00000438254 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
CUBN-204ENST00000438254 POLR3AO14802 1390 aaPredicted RBP13.34□□□□□ -0.27
CUBN-204ENST00000438254 MON2Q7Z3U7 1717 aa13.34□□□□□ -0.27
CUBN-204ENST00000438254 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
CUBN-204ENST00000438254 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.28
CUBN-204ENST00000438254 MST1RQ04912 1400 aa13.33□□□□□ -0.28
CUBN-204ENST00000438254 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
CUBN-204ENST00000438254 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
CUBN-204ENST00000438254 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
CUBN-204ENST00000438254 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
CUBN-204ENST00000438254 C1orf167Q5SNV9 1468 aa13.32□□□□□ -0.28
CUBN-204ENST00000438254 MIER1Q8N108 512 aa13.32□□□□□ -0.28
CUBN-204ENST00000438254 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
CUBN-204ENST00000438254 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
CUBN-204ENST00000438254 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
CUBN-204ENST00000438254 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
CUBN-204ENST00000438254 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
CUBN-204ENST00000438254 MSH6P52701 1360 aa13.3□□□□□ -0.28
CUBN-204ENST00000438254 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
CUBN-204ENST00000438254 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
CUBN-204ENST00000438254 ACEP12821 1306 aa13.29□□□□□ -0.28
CUBN-204ENST00000438254 KTN1Q86UP2 1357 aaKnown RBP13.29□□□□□ -0.28
CUBN-204ENST00000438254 USP6P35125 1406 aa13.29□□□□□ -0.28
CUBN-204ENST00000438254 ANP32CO43423 234 aa13.28□□□□□ -0.28
CUBN-204ENST00000438254 HDGFL2Q7Z4V5 671 aaPredicted RBP13.28□□□□□ -0.28
CUBN-204ENST00000438254 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
CUBN-204ENST00000438254 KNSTRNQ9Y448 316 aa13.28□□□□□ -0.28
CUBN-204ENST00000438254 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
CUBN-204ENST00000438254 NSD2O96028 1365 aa13.27□□□□□ -0.29
CUBN-204ENST00000438254 ATF3P18847 181 aa13.26□□□□□ -0.29
CUBN-204ENST00000438254 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
CUBN-204ENST00000438254 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
CUBN-204ENST00000438254 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
CUBN-204ENST00000438254 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
CUBN-204ENST00000438254 RALBP1Q15311 655 aa13.25□□□□□ -0.29
CUBN-204ENST00000438254 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
CUBN-204ENST00000438254 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
CUBN-204ENST00000438254 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
CUBN-204ENST00000438254 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
CUBN-204ENST00000438254 FYB1O15117 783 aa13.24□□□□□ -0.29
CUBN-204ENST00000438254 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
CUBN-204ENST00000438254 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
CUBN-204ENST00000438254 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
CUBN-204ENST00000438254 CCER2I3L3R5 266 aa13.23□□□□□ -0.29
CUBN-204ENST00000438254 ESCO1Q5FWF5 840 aa13.23□□□□□ -0.29
CUBN-204ENST00000438254 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
CUBN-204ENST00000438254 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
CUBN-204ENST00000438254 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
CUBN-204ENST00000438254 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
CUBN-204ENST00000438254 PIK3C2AO00443 1686 aa13.21□□□□□ -0.29
CUBN-204ENST00000438254 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
CUBN-204ENST00000438254 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.29
CUBN-204ENST00000438254 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
CUBN-204ENST00000438254 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
CUBN-204ENST00000438254 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
CUBN-204ENST00000438254 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
CUBN-204ENST00000438254 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
CUBN-204ENST00000438254 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
CUBN-204ENST00000438254 PXDNQ92626 1479 aa13.2□□□□□ -0.3
CUBN-204ENST00000438254 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
CUBN-204ENST00000438254 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
CUBN-204ENST00000438254 NME9Q86XW9 330 aa13.19□□□□□ -0.3
CUBN-204ENST00000438254 GGNBP2Q9H3C7 697 aa13.19□□□□□ -0.3
CUBN-204ENST00000438254 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
CUBN-204ENST00000438254 NHSL1Q5SYE7 1610 aa13.18□□□□□ -0.3
CUBN-204ENST00000438254 FOXO3O43524 673 aa13.18□□□□□ -0.3
CUBN-204ENST00000438254 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
CUBN-204ENST00000438254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
CUBN-204ENST00000438254 PROM2Q8N271 834 aa13.18□□□□□ -0.3
CUBN-204ENST00000438254 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
CUBN-204ENST00000438254 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
CUBN-204ENST00000438254 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
CUBN-204ENST00000438254 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
CUBN-204ENST00000438254 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
CUBN-204ENST00000438254 SOS2Q07890 1332 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms