RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 PUS7Q96PZ0 661 aaKnown RBP21.18■□□□□ 0.98
TTC3-209ENST00000438055 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
TTC3-209ENST00000438055 TRIM35Q9UPQ4 493 aa21.18■□□□□ 0.98
TTC3-209ENST00000438055 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
TTC3-209ENST00000438055 YEATS2Q9ULM3 1422 aa21.18■□□□□ 0.98
TTC3-209ENST00000438055 ADGRB1O14514 1584 aa21.17■□□□□ 0.98
TTC3-209ENST00000438055 SETBP1Q9Y6X0 1596 aa21.17■□□□□ 0.98
TTC3-209ENST00000438055 LNPKQ9C0E8 428 aa21.16■□□□□ 0.98
TTC3-209ENST00000438055 HECW2Q9P2P5 1572 aa21.16■□□□□ 0.98
TTC3-209ENST00000438055 SOX12O15370 315 aa21.16■□□□□ 0.98
TTC3-209ENST00000438055 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
TTC3-209ENST00000438055 NEURL4Q96JN8 1562 aa21.15■□□□□ 0.98
TTC3-209ENST00000438055 ABCC11Q96J66 1382 aa21.14■□□□□ 0.98
TTC3-209ENST00000438055 USP19O94966 1318 aa21.14■□□□□ 0.98
TTC3-209ENST00000438055 CT47B1P0C2W7 299 aaPredicted RBP21.14■□□□□ 0.97
TTC3-209ENST00000438055 GLI2P10070 1586 aa21.14■□□□□ 0.97
TTC3-209ENST00000438055 TULP4Q9NRJ4 1543 aa21.13■□□□□ 0.97
TTC3-209ENST00000438055 FRMPD1Q5SYB0 1578 aa21.13■□□□□ 0.97
TTC3-209ENST00000438055 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
TTC3-209ENST00000438055 C1orf115Q9H7X2 142 aa21.13■□□□□ 0.97
TTC3-209ENST00000438055 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
TTC3-209ENST00000438055 KIF16BQ96L93 1317 aa21.13■□□□□ 0.97
TTC3-209ENST00000438055 TXNDC2Q86VQ3 553 aa21.12■□□□□ 0.97
TTC3-209ENST00000438055 C22orf23Q9BZE7 217 aa21.11■□□□□ 0.97
TTC3-209ENST00000438055 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
TTC3-209ENST00000438055 FCHSD2O94868 740 aa21.1■□□□□ 0.97
TTC3-209ENST00000438055 NME9Q86XW9 330 aa21.1■□□□□ 0.97
TTC3-209ENST00000438055 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
TTC3-209ENST00000438055 ANKRD45Q5TZF3 282 aa21.09■□□□□ 0.97
TTC3-209ENST00000438055 TBC1D2Q9BYX2 928 aa21.09■□□□□ 0.97
TTC3-209ENST00000438055 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
TTC3-209ENST00000438055 ZRANB1Q9UGI0 708 aa21.09■□□□□ 0.97
TTC3-209ENST00000438055 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
TTC3-209ENST00000438055 HSP90AA1P07900 732 aaKnown RBP21.08■□□□□ 0.97
TTC3-209ENST00000438055 PHACTR3Q96KR7 559 aa21.08■□□□□ 0.97
TTC3-209ENST00000438055 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
TTC3-209ENST00000438055 GZF1Q9H116 711 aaPredicted RBP21.08■□□□□ 0.96
TTC3-209ENST00000438055 PPLO60437 1756 aa21.07■□□□□ 0.96
TTC3-209ENST00000438055 MYO3AQ8NEV4 1616 aa21.07■□□□□ 0.96
TTC3-209ENST00000438055 COG3Q96JB2 828 aa21.07■□□□□ 0.96
TTC3-209ENST00000438055 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
TTC3-209ENST00000438055 NCKAP5LQ9HCH0 1330 aa21.06■□□□□ 0.96
TTC3-209ENST00000438055 HSCBQ8IWL3 235 aa21.06■□□□□ 0.96
TTC3-209ENST00000438055 NEO1Q92859 1461 aa21.06■□□□□ 0.96
TTC3-209ENST00000438055 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
TTC3-209ENST00000438055 CFAP74Q9C0B2 1584 aa21.04■□□□□ 0.96
TTC3-209ENST00000438055 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
TTC3-209ENST00000438055 DCTN1Q14203 1278 aa21.04■□□□□ 0.96
TTC3-209ENST00000438055 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
TTC3-209ENST00000438055 IL16Q14005 1332 aa21.03■□□□□ 0.96
TTC3-209ENST00000438055 TSPYL6Q8N831 410 aa21.03■□□□□ 0.96
TTC3-209ENST00000438055 HDAC1Q13547 482 aaPredicted RBP21.03■□□□□ 0.96
TTC3-209ENST00000438055 CAMSAP1Q5T5Y3 1602 aa21.02■□□□□ 0.96
TTC3-209ENST00000438055 APBB1O00213 710 aa21.02■□□□□ 0.96
TTC3-209ENST00000438055 SHPRHQ149N8 1683 aa21.02■□□□□ 0.96
TTC3-209ENST00000438055 GNAI1P63096 354 aa21.02■□□□□ 0.96
TTC3-209ENST00000438055 ZBTB40Q9NUA8 1239 aa21.02■□□□□ 0.96
TTC3-209ENST00000438055 RSPH6AQ9H0K4 717 aa21.02■□□□□ 0.95
TTC3-209ENST00000438055 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
TTC3-209ENST00000438055 TWISTNBQ3B726 338 aaPredicted RBP21■□□□□ 0.95
TTC3-209ENST00000438055 FOXD4L1Q9NU39 408 aa21■□□□□ 0.95
TTC3-209ENST00000438055 NUDT16Q96DE0 195 aaKnown RBP21■□□□□ 0.95
TTC3-209ENST00000438055 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
TTC3-209ENST00000438055 CHD1LQ86WJ1 897 aa20.99■□□□□ 0.95
TTC3-209ENST00000438055 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
TTC3-209ENST00000438055 ALDH1L2Q3SY69 923 aa20.99■□□□□ 0.95
TTC3-209ENST00000438055 WASLO00401 505 aaPredicted RBP20.98■□□□□ 0.95
TTC3-209ENST00000438055 CHMP4BQ9H444 224 aaKnown RBP20.98■□□□□ 0.95
TTC3-209ENST00000438055 ARHGAP31Q2M1Z3 1444 aa20.98■□□□□ 0.95
TTC3-209ENST00000438055 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
TTC3-209ENST00000438055 MBIPQ9NS73 344 aa20.97■□□□□ 0.95
TTC3-209ENST00000438055 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
TTC3-209ENST00000438055 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
TTC3-209ENST00000438055 VAMP4O75379 141 aa20.95■□□□□ 0.94
TTC3-209ENST00000438055 SIGLEC1Q9BZZ2 1709 aa20.95■□□□□ 0.94
TTC3-209ENST00000438055 CCDC61Q9Y6R9 512 aa20.95■□□□□ 0.94
TTC3-209ENST00000438055 ZC3H13Q5T200 1668 aaKnown RBP20.95■□□□□ 0.94
TTC3-209ENST00000438055 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
TTC3-209ENST00000438055 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
TTC3-209ENST00000438055 PTPRMP28827 1452 aa20.94■□□□□ 0.94
TTC3-209ENST00000438055 PIK3C2BO00750 1634 aa20.94■□□□□ 0.94
TTC3-209ENST00000438055 SULT6B1Q6IMI4 303 aa20.94■□□□□ 0.94
TTC3-209ENST00000438055 NUCB1Q02818 461 aa20.93■□□□□ 0.94
TTC3-209ENST00000438055 C8orf58Q8NAV2 365 aa20.93■□□□□ 0.94
TTC3-209ENST00000438055 CHMP5Q9NZZ3 219 aa20.93■□□□□ 0.94
TTC3-209ENST00000438055 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.93■□□□□ 0.94
TTC3-209ENST00000438055 RIMS2Q9UQ26 1411 aa20.93■□□□□ 0.94
TTC3-209ENST00000438055 HDGFP51858 240 aaKnown RBP20.93■□□□□ 0.94
TTC3-209ENST00000438055 PPIP5K1Q6PFW1 1433 aa20.92■□□□□ 0.94
TTC3-209ENST00000438055 MRPL50Q8N5N7 158 aaKnown RBP20.92■□□□□ 0.94
TTC3-209ENST00000438055 IFT57Q9NWB7 429 aa20.91■□□□□ 0.94
TTC3-209ENST00000438055 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.91■□□□□ 0.94
TTC3-209ENST00000438055 API5Q9BZZ5 524 aaKnown RBP20.91■□□□□ 0.94
TTC3-209ENST00000438055 IL13P35225 146 aa20.9■□□□□ 0.94
TTC3-209ENST00000438055 AEBP1Q8IUX7 1158 aa20.9■□□□□ 0.94
TTC3-209ENST00000438055 ZNF428Q96B54 188 aa20.9■□□□□ 0.94
TTC3-209ENST00000438055 KRT24Q2M2I5 525 aa20.89■□□□□ 0.94
TTC3-209ENST00000438055 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.93
TTC3-209ENST00000438055 MCM10Q7L590 875 aa20.89■□□□□ 0.93
TTC3-209ENST00000438055 GCC1Q96CN9 775 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms