RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 ARHGEF10O15013 1369 aa18.48■□□□□ 0.55
EXT1-203ENST00000437196 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
EXT1-203ENST00000437196 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
EXT1-203ENST00000437196 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
EXT1-203ENST00000437196 DDX17Q92841 729 aaKnown RBP18.48■□□□□ 0.55
EXT1-203ENST00000437196 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
EXT1-203ENST00000437196 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
EXT1-203ENST00000437196 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
EXT1-203ENST00000437196 CGNL1Q0VF96 1302 aa18.47■□□□□ 0.55
EXT1-203ENST00000437196 TRPM3Q9HCF6 1732 aaPredicted RBP18.46■□□□□ 0.55
EXT1-203ENST00000437196 TNS3Q68CZ2 1445 aa18.46■□□□□ 0.55
EXT1-203ENST00000437196 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
EXT1-203ENST00000437196 CARD14Q9BXL6 1004 aa18.46■□□□□ 0.55
EXT1-203ENST00000437196 ABTB2Q8N961 1025 aa18.45■□□□□ 0.54
EXT1-203ENST00000437196 COL16A1Q07092 1604 aaPredicted RBP18.44■□□□□ 0.54
EXT1-203ENST00000437196 LMOD2Q6P5Q4 547 aa18.44■□□□□ 0.54
EXT1-203ENST00000437196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■■□□ 16.6
EXT1-203ENST00000437196 NSD2O96028 1365 aa18.44■□□□□ 0.54
EXT1-203ENST00000437196 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
EXT1-203ENST00000437196 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
EXT1-203ENST00000437196 PER1O15534 1290 aaPredicted RBP18.42■□□□□ 0.54
EXT1-203ENST00000437196 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
EXT1-203ENST00000437196 HSPA1LP34931 641 aa18.41■□□□□ 0.54
EXT1-203ENST00000437196 NLRP6P59044 892 aa18.4■□□□□ 0.54
EXT1-203ENST00000437196 JCADQ9P266 1359 aa18.4■□□□□ 0.54
EXT1-203ENST00000437196 NPC1L1Q9UHC9 1359 aa18.4■□□□□ 0.54
EXT1-203ENST00000437196 FYB1O15117 783 aa18.4■□□□□ 0.54
EXT1-203ENST00000437196 COG3Q96JB2 828 aa18.4■□□□□ 0.54
EXT1-203ENST00000437196 USP31Q70CQ4 1352 aa18.39■□□□□ 0.54
EXT1-203ENST00000437196 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
EXT1-203ENST00000437196 NME9Q86XW9 330 aa18.39■□□□□ 0.53
EXT1-203ENST00000437196 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
EXT1-203ENST00000437196 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
EXT1-203ENST00000437196 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
EXT1-203ENST00000437196 USP54Q70EL1 1684 aa18.37■□□□□ 0.53
EXT1-203ENST00000437196 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
EXT1-203ENST00000437196 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
EXT1-203ENST00000437196 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
EXT1-203ENST00000437196 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
EXT1-203ENST00000437196 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
EXT1-203ENST00000437196 HAP1P54257 671 aaPredicted RBP18.35■□□□□ 0.53
EXT1-203ENST00000437196 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
EXT1-203ENST00000437196 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
EXT1-203ENST00000437196 NUTM2GQ5VZR2 741 aa18.34■□□□□ 0.53
EXT1-203ENST00000437196 USP19O94966 1318 aa18.34■□□□□ 0.53
EXT1-203ENST00000437196 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
EXT1-203ENST00000437196 MORC1Q86VD1 984 aa18.33■□□□□ 0.53
EXT1-203ENST00000437196 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
EXT1-203ENST00000437196 GCP02774 474 aa18.31■□□□□ 0.52
EXT1-203ENST00000437196 SLIT3O75094 1523 aa18.31■□□□□ 0.52
EXT1-203ENST00000437196 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
EXT1-203ENST00000437196 PHRF1Q9P1Y6 1649 aaKnown RBP18.29■□□□□ 0.52
EXT1-203ENST00000437196 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
EXT1-203ENST00000437196 RALBP1Q15311 655 aa18.29■□□□□ 0.52
EXT1-203ENST00000437196 CRYBG1Q9Y4K1 1723 aa18.29■□□□□ 0.52
EXT1-203ENST00000437196 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
EXT1-203ENST00000437196 ABCA3Q99758 1704 aa18.28■□□□□ 0.52
EXT1-203ENST00000437196 ANP32CO43423 234 aa18.27■□□□□ 0.52
EXT1-203ENST00000437196 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
EXT1-203ENST00000437196 AATKQ6ZMQ8 1374 aa18.27■□□□□ 0.52
EXT1-203ENST00000437196 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
EXT1-203ENST00000437196 CPDO75976 1380 aa18.25■□□□□ 0.51
EXT1-203ENST00000437196 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
EXT1-203ENST00000437196 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
EXT1-203ENST00000437196 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
EXT1-203ENST00000437196 SOX12O15370 315 aa18.24■□□□□ 0.51
EXT1-203ENST00000437196 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
EXT1-203ENST00000437196 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
EXT1-203ENST00000437196 NFAT5O94916 1531 aa18.24■□□□□ 0.51
EXT1-203ENST00000437196 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
EXT1-203ENST00000437196 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
EXT1-203ENST00000437196 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
EXT1-203ENST00000437196 ZC3H6P61129 1189 aaKnown RBP18.23■□□□□ 0.51
EXT1-203ENST00000437196 PRKRIP1Q9H875 184 aaPredicted RBP18.23■□□□□ 0.51
EXT1-203ENST00000437196 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
EXT1-203ENST00000437196 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
EXT1-203ENST00000437196 ARHGEF25Q86VW2 580 aa18.22■□□□□ 0.51
EXT1-203ENST00000437196 KIAA0232Q92628 1395 aa18.21■□□□□ 0.51
EXT1-203ENST00000437196 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
EXT1-203ENST00000437196 ABCC6O95255 1503 aa18.21■□□□□ 0.51
EXT1-203ENST00000437196 LTN1O94822 1766 aa18.21■□□□□ 0.51
EXT1-203ENST00000437196 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
EXT1-203ENST00000437196 ADAMTS2O95450 1211 aa18.2■□□□□ 0.5
EXT1-203ENST00000437196 AMPHP49418 695 aa18.2■□□□□ 0.5
EXT1-203ENST00000437196 MAP3K19Q56UN5 1328 aa18.19■□□□□ 0.5
EXT1-203ENST00000437196 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
EXT1-203ENST00000437196 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
EXT1-203ENST00000437196 ZBTB7CA1YPR0 619 aa18.18■□□□□ 0.5
EXT1-203ENST00000437196 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
EXT1-203ENST00000437196 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
EXT1-203ENST00000437196 FLT4P35916 1363 aa18.18■□□□□ 0.5
EXT1-203ENST00000437196 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
EXT1-203ENST00000437196 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
EXT1-203ENST00000437196 IP6K1Q92551 441 aa18.17■□□□□ 0.5
EXT1-203ENST00000437196 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
EXT1-203ENST00000437196 SMG6Q86US8 1419 aaKnown RBP18.16■□□□□ 0.5
EXT1-203ENST00000437196 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
EXT1-203ENST00000437196 LRP6O75581 1613 aa18.16■□□□□ 0.5
EXT1-203ENST00000437196 FAM83GA6ND36 823 aa18.15■□□□□ 0.5
EXT1-203ENST00000437196 MTHFSP49914 203 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms