RNA–Protein interactions for RNA: ENST00000435044.1

LINC00385-201, long intergenic non-protein coding RNA 385, humanhuman

TSL 3 BASIC

Gene LINC00385, Length 374 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00385-201ENST00000435044 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
LINC00385-201ENST00000435044 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
LINC00385-201ENST00000435044 USP6P35125 1406 aa11.86□□□□□ -0.51
LINC00385-201ENST00000435044 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
LINC00385-201ENST00000435044 MSH6P52701 1360 aa11.86□□□□□ -0.51
LINC00385-201ENST00000435044 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
LINC00385-201ENST00000435044 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
LINC00385-201ENST00000435044 AATKQ6ZMQ8 1374 aa11.85□□□□□ -0.51
LINC00385-201ENST00000435044 MTHFSP49914 203 aa11.85□□□□□ -0.51
LINC00385-201ENST00000435044 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
LINC00385-201ENST00000435044 PSME1Q06323 249 aa11.84□□□□□ -0.51
LINC00385-201ENST00000435044 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
LINC00385-201ENST00000435044 PMFBP1Q8TBY8 1022 aa11.84□□□□□ -0.51
LINC00385-201ENST00000435044 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
LINC00385-201ENST00000435044 RGPD8O14715 1765 aaPredicted RBP11.83□□□□□ -0.52
LINC00385-201ENST00000435044 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
LINC00385-201ENST00000435044 NEFMP07197 916 aa11.82□□□□□ -0.52
LINC00385-201ENST00000435044 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
LINC00385-201ENST00000435044 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
LINC00385-201ENST00000435044 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
LINC00385-201ENST00000435044 SSH2Q76I76 1423 aa11.81□□□□□ -0.52
LINC00385-201ENST00000435044 ADAMTS8Q9UP79 889 aa11.81□□□□□ -0.52
LINC00385-201ENST00000435044 DIAPH1O60610 1272 aaKnown RBP11.8□□□□□ -0.52
LINC00385-201ENST00000435044 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
LINC00385-201ENST00000435044 NME9Q86XW9 330 aa11.8□□□□□ -0.52
LINC00385-201ENST00000435044 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
LINC00385-201ENST00000435044 BLMP54132 1417 aaPredicted RBP11.79□□□□□ -0.52
LINC00385-201ENST00000435044 C1orf167Q5SNV9 1468 aa11.79□□□□□ -0.52
LINC00385-201ENST00000435044 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
LINC00385-201ENST00000435044 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
LINC00385-201ENST00000435044 KCNH5Q8NCM2 988 aa11.79□□□□□ -0.52
LINC00385-201ENST00000435044 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
LINC00385-201ENST00000435044 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
LINC00385-201ENST00000435044 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
LINC00385-201ENST00000435044 LRRC7Q96NW7 1537 aa11.78□□□□□ -0.52
LINC00385-201ENST00000435044 NLRP6P59044 892 aa11.78□□□□□ -0.52
LINC00385-201ENST00000435044 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
LINC00385-201ENST00000435044 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.52
LINC00385-201ENST00000435044 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.52
LINC00385-201ENST00000435044 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.52
LINC00385-201ENST00000435044 RUNDC1Q96C34 613 aa11.77□□□□□ -0.53
LINC00385-201ENST00000435044 POLKQ9UBT6 870 aa11.77□□□□□ -0.53
LINC00385-201ENST00000435044 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.53
LINC00385-201ENST00000435044 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
LINC00385-201ENST00000435044 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
LINC00385-201ENST00000435044 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
LINC00385-201ENST00000435044 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00385-201ENST00000435044 MST1RQ04912 1400 aa11.76□□□□□ -0.53
LINC00385-201ENST00000435044 FOXO3O43524 673 aa11.75□□□□□ -0.53
LINC00385-201ENST00000435044 FCHSD2O94868 740 aa11.75□□□□□ -0.53
LINC00385-201ENST00000435044 KRT28Q7Z3Y7 464 aa11.75□□□□□ -0.53
LINC00385-201ENST00000435044 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
LINC00385-201ENST00000435044 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
LINC00385-201ENST00000435044 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
LINC00385-201ENST00000435044 ORAI2Q96SN7 254 aa11.74□□□□□ -0.53
LINC00385-201ENST00000435044 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
LINC00385-201ENST00000435044 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
LINC00385-201ENST00000435044 AMPHP49418 695 aa11.73□□□□□ -0.53
LINC00385-201ENST00000435044 SLAIN2Q9P270 581 aa11.73□□□□□ -0.53
LINC00385-201ENST00000435044 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
LINC00385-201ENST00000435044 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
LINC00385-201ENST00000435044 FLT4P35916 1363 aa11.72□□□□□ -0.53
LINC00385-201ENST00000435044 NEFLP07196 543 aa11.72□□□□□ -0.53
LINC00385-201ENST00000435044 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
LINC00385-201ENST00000435044 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
LINC00385-201ENST00000435044 XIRP1Q702N8 1843 aaKnown RBP11.71□□□□□ -0.54
LINC00385-201ENST00000435044 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
LINC00385-201ENST00000435044 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
LINC00385-201ENST00000435044 APAF1O14727 1248 aa11.7□□□□□ -0.54
LINC00385-201ENST00000435044 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
LINC00385-201ENST00000435044 RRS1Q15050 365 aaKnown RBP11.7□□□□□ -0.54
LINC00385-201ENST00000435044 CCDC27Q2M243 656 aa11.7□□□□□ -0.54
LINC00385-201ENST00000435044 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
LINC00385-201ENST00000435044 IL13P35225 146 aa11.69□□□□□ -0.54
LINC00385-201ENST00000435044 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
LINC00385-201ENST00000435044 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
LINC00385-201ENST00000435044 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
LINC00385-201ENST00000435044 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
LINC00385-201ENST00000435044 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
LINC00385-201ENST00000435044 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
LINC00385-201ENST00000435044 MAP3K19Q56UN5 1328 aa11.67□□□□□ -0.54
LINC00385-201ENST00000435044 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
LINC00385-201ENST00000435044 E9PSI1 815 aa11.67□□□□□ -0.54
LINC00385-201ENST00000435044 SOX12O15370 315 aa11.67□□□□□ -0.54
LINC00385-201ENST00000435044 BRINP3Q76B58 766 aa11.67□□□□□ -0.54
LINC00385-201ENST00000435044 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
LINC00385-201ENST00000435044 GCP02774 474 aa11.66□□□□□ -0.54
LINC00385-201ENST00000435044 IP6K1Q92551 441 aa11.66□□□□□ -0.54
LINC00385-201ENST00000435044 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
LINC00385-201ENST00000435044 USP19O94966 1318 aa11.65□□□□□ -0.54
LINC00385-201ENST00000435044 HOXC9P31274 260 aa11.65□□□□□ -0.54
LINC00385-201ENST00000435044 EIF4A2Q14240 407 aaKnown RBP11.65□□□□□ -0.54
LINC00385-201ENST00000435044 NUTM2GQ5VZR2 741 aa11.65□□□□□ -0.54
LINC00385-201ENST00000435044 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
LINC00385-201ENST00000435044 RSPH6AQ9H0K4 717 aa11.65□□□□□ -0.54
LINC00385-201ENST00000435044 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
LINC00385-201ENST00000435044 SLIT3O75094 1523 aa11.65□□□□□ -0.55
LINC00385-201ENST00000435044 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
LINC00385-201ENST00000435044 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
LINC00385-201ENST00000435044 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms